RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 ARRDC1Q8N5I2 433 aa11.06□□□□□ -0.64
RTN3-211ENST00000542238 ZFAND1Q8TCF1 268 aa11.06□□□□□ -0.64
RTN3-211ENST00000542238 NEU1Q99519 415 aa11.06□□□□□ -0.64
RTN3-211ENST00000542238 SCRT1Q9BWW7 348 aa11.06□□□□□ -0.64
RTN3-211ENST00000542238 SRRQ9GZT4 340 aa11.06□□□□□ -0.64
RTN3-211ENST00000542238 HEYLQ9NQ87 328 aaPredicted RBP11.06□□□□□ -0.64
RTN3-211ENST00000542238 PKHD1P08F94 4074 aa11.05□□□□□ -0.64
RTN3-211ENST00000542238 SMIM9A6NGZ8 99 aa11.05□□□□□ -0.64
RTN3-211ENST00000542238 GSTZ1O43708 216 aaPredicted RBP11.05□□□□□ -0.64
RTN3-211ENST00000542238 B3GALNT1O75752 331 aa11.05□□□□□ -0.64
RTN3-211ENST00000542238 IL4P05112 153 aa11.05□□□□□ -0.64
RTN3-211ENST00000542238 EMP1P54849 157 aa11.05□□□□□ -0.64
RTN3-211ENST00000542238 ASAH1Q13510 395 aa11.05□□□□□ -0.64
RTN3-211ENST00000542238 PRSS54Q6PEW0 395 aa11.05□□□□□ -0.64
RTN3-211ENST00000542238 SIGLEC15Q6ZMC9 328 aa11.05□□□□□ -0.64
RTN3-211ENST00000542238 LHFPL1Q86WI0 220 aa11.05□□□□□ -0.64
RTN3-211ENST00000542238 FAM219AQ8IW50 185 aa11.05□□□□□ -0.64
RTN3-211ENST00000542238 RNASEH2CQ8TDP1 164 aaKnown RBP11.05□□□□□ -0.64
RTN3-211ENST00000542238 FAM210BQ96KR6 192 aa11.05□□□□□ -0.64
RTN3-211ENST00000542238 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.05□□□□□ -0.64
RTN3-211ENST00000542238 TEX48A0A1B0GUV7 120 aa11.04□□□□□ -0.64
RTN3-211ENST00000542238 FAM25AB3EWG3 89 aa11.04□□□□□ -0.64
RTN3-211ENST00000542238 FAM25CB3EWG5 89 aa11.04□□□□□ -0.64
RTN3-211ENST00000542238 FAM25GB3EWG6 89 aa11.04□□□□□ -0.64
RTN3-211ENST00000542238 CCNKO75909 580 aa11.04□□□□□ -0.64
RTN3-211ENST00000542238 HLA-DRB4P13762 266 aa11.04□□□□□ -0.64
RTN3-211ENST00000542238 UCP1P25874 307 aa11.04□□□□□ -0.64
RTN3-211ENST00000542238 IFITM2Q01629 132 aa11.04□□□□□ -0.64
RTN3-211ENST00000542238 USF2Q15853 346 aaPredicted RBP11.04□□□□□ -0.64
RTN3-211ENST00000542238 C2orf83Q53S99 150 aa11.04□□□□□ -0.64
RTN3-211ENST00000542238 RNASE12Q5GAN4 147 aaKnown RBP11.04□□□□□ -0.64
RTN3-211ENST00000542238 ETFRF1Q6IPR1 90 aa11.04□□□□□ -0.64
RTN3-211ENST00000542238 ZNF705AQ6ZN79 300 aaPredicted RBP11.04□□□□□ -0.64
RTN3-211ENST00000542238 OR52E5Q8NH55 327 aa11.04□□□□□ -0.64
RTN3-211ENST00000542238 DIRAS2Q96HU8 199 aa11.04□□□□□ -0.64
RTN3-211ENST00000542238 EXTL2Q9UBQ6 330 aa11.04□□□□□ -0.64
RTN3-211ENST00000542238 HLA-DRB4X5D2U9 266 aa11.04□□□□□ -0.64
RTN3-211ENST00000542238 IGLV2-18A0A075B6J9 118 aa11.03□□□□□ -0.64
RTN3-211ENST00000542238 A0A0G2JRQ6 117 aa11.03□□□□□ -0.64
RTN3-211ENST00000542238 BUB3O43684 328 aa11.03□□□□□ -0.64
RTN3-211ENST00000542238 CD74P04233 296 aa11.03□□□□□ -0.64
RTN3-211ENST00000542238 CD3DP04234 171 aa11.03□□□□□ -0.64
RTN3-211ENST00000542238 RD3LP0DJH9 198 aa11.03□□□□□ -0.64
RTN3-211ENST00000542238 TBPP20226 339 aa11.03□□□□□ -0.64
RTN3-211ENST00000542238 NKX2-1P43699 371 aaPredicted RBP11.03□□□□□ -0.64
RTN3-211ENST00000542238 ZNF79Q15937 498 aa11.03□□□□□ -0.64
RTN3-211ENST00000542238 Q6ZRM9 215 aa11.03□□□□□ -0.64
RTN3-211ENST00000542238 KLK11Q9UBX7 282 aa11.03□□□□□ -0.64
RTN3-211ENST00000542238 RFNGQ9Y644 331 aa11.03□□□□□ -0.64
RTN3-211ENST00000542238 FAT2Q9NYQ8 4349 aa11.02□□□□□ -0.64
RTN3-211ENST00000542238 IGHV3OR16-12A0A075B7B8 117 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 CEBPZOSA8MTT3 80 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 ZNF705FA8MVS1 300 aaPredicted RBP11.02□□□□□ -0.65
RTN3-211ENST00000542238 GABARAPH6UMI1 98 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 ZNF705DP0CH99 300 aaPredicted RBP11.02□□□□□ -0.65
RTN3-211ENST00000542238 ZNF705BP0CI00 300 aaPredicted RBP11.02□□□□□ -0.65
RTN3-211ENST00000542238 IL7P13232 177 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 NUP62P37198 522 aaPredicted RBP11.02□□□□□ -0.65
RTN3-211ENST00000542238 SCGB2B2Q4G0G5 96 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 AARDQ4LEZ3 155 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 NOXA1Q86UR1 476 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 SLC24A4Q8NFF2 622 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 OR13C8Q8NGS7 320 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 TERB2Q8NHR7 220 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 SMIM4Q8WVI0 70 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 DEDD2Q8WXF8 326 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 ABHD1Q96SE0 405 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 TMEM222Q9H0R3 208 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 PFDN2Q9UHV9 154 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 DNAH17Q9UFH2 4485 aa11.02□□□□□ -0.65
RTN3-211ENST00000542238 FABP12A6NFH5 140 aa11.01□□□□□ -0.65
RTN3-211ENST00000542238 CDS2O95674 445 aa11.01□□□□□ -0.65
RTN3-211ENST00000542238 TOMM40O96008 361 aa11.01□□□□□ -0.65
RTN3-211ENST00000542238 IGKV3-20P01619 116 aa11.01□□□□□ -0.65
RTN3-211ENST00000542238 ID1P41134 155 aa11.01□□□□□ -0.65
RTN3-211ENST00000542238 RNF212Q495C1 297 aa11.01□□□□□ -0.65
RTN3-211ENST00000542238 Q6ZR54 194 aa11.01□□□□□ -0.65
RTN3-211ENST00000542238 NRARPQ7Z6K4 114 aa11.01□□□□□ -0.65
RTN3-211ENST00000542238 NPIPB3Q92617 1050 aa11.01□□□□□ -0.65
RTN3-211ENST00000542238 ACY3Q96HD9 319 aa11.01□□□□□ -0.65
RTN3-211ENST00000542238 NIPSNAP3BQ9BS92 247 aa11.01□□□□□ -0.65
RTN3-211ENST00000542238 MTFP1Q9UDX5 166 aa11.01□□□□□ -0.65
RTN3-211ENST00000542238 DNAH2Q9P225 4427 aa11.01□□□□□ -0.65
RTN3-211ENST00000542238 TEX13DA0A0J9YY54 714 aaPredicted RBP11□□□□□ -0.65
RTN3-211ENST00000542238 FXYD7P58549 80 aa11□□□□□ -0.65
RTN3-211ENST00000542238 BAK1Q16611 211 aa11□□□□□ -0.65
RTN3-211ENST00000542238 FAM222AQ5U5X8 452 aa11□□□□□ -0.65
RTN3-211ENST00000542238 OR52I2Q8NH67 350 aa11□□□□□ -0.65
RTN3-211ENST00000542238 MARCH1Q8TCQ1 289 aa11□□□□□ -0.65
RTN3-211ENST00000542238 RBPMSQ93062 196 aaKnown RBP11□□□□□ -0.65
RTN3-211ENST00000542238 ST6GAL2Q96JF0 529 aa11□□□□□ -0.65
RTN3-211ENST00000542238 LINC00052Q96N35 136 aa11□□□□□ -0.65
RTN3-211ENST00000542238 DKK2Q9UBU2 259 aa11□□□□□ -0.65
RTN3-211ENST00000542238 CACNG5Q9UF02 275 aa11□□□□□ -0.65
RTN3-211ENST00000542238 CACFD1Q9UGQ2 172 aa11□□□□□ -0.65
RTN3-211ENST00000542238 C14orf166Q9Y224 244 aaKnown RBP11□□□□□ -0.65
RTN3-211ENST00000542238 OR5AC1P0C628 307 aa10.99□□□□□ -0.65
RTN3-211ENST00000542238 PSG1P11464 419 aa10.99□□□□□ -0.65
RTN3-211ENST00000542238 HTN3P15516 51 aa10.99□□□□□ -0.65
RTN3-211ENST00000542238 IL18Q14116 193 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 230.2 ms