RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 OSTCQ9NRP0 149 aa2.12□□□□□ -2.07
LEMD3-204ENST00000542032 SCN3BQ9NY72 215 aa2.12□□□□□ -2.07
LEMD3-204ENST00000542032 OR5V1Q9UGF6 321 aa2.12□□□□□ -2.07
LEMD3-204ENST00000542032 TRAPPC1Q9Y5R8 145 aa2.12□□□□□ -2.07
LEMD3-204ENST00000542032 ICOSQ9Y6W8 199 aa2.12□□□□□ -2.07
LEMD3-204ENST00000542032 U3KQK5 164 aa2.12□□□□□ -2.07
LEMD3-204ENST00000542032 MAST2Q6P0Q8 1798 aa2.12□□□□□ -2.07
LEMD3-204ENST00000542032 UBR2Q8IWV8 1755 aa2.12□□□□□ -2.07
LEMD3-204ENST00000542032 CAMSAP2Q08AD1 1489 aa2.12□□□□□ -2.07
LEMD3-204ENST00000542032 ADGBQ8N7X0 1667 aa2.12□□□□□ -2.07
LEMD3-204ENST00000542032 PRDM2Q13029 1718 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.11□□□□□ -2.07
LEMD3-204ENST00000542032 MYH7BA7E2Y1 1941 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 ZNF638Q14966 1978 aaKnown RBP2.11□□□□□ -2.07
LEMD3-204ENST00000542032 TRBV24-1A0A075B6N3 115 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 TRBV6-6A0A0A6YYG2 114 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 A0A0B4J2C4 111 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 IGKV1-9A0A0C4DH69 117 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 TRBV7-6A0A0J9YX20 115 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 C1QAP02745 245 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 ZNF728P0DKX0 622 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 CRHBPP24387 322 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 DYNLT3P51808 116 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 PPP3R1P63098 170 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 HBBP68871 147 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 AKR1C1Q04828 323 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 EBI3Q14213 229 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 KISS1Q15726 138 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 UBE2SQ16763 222 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 ZNF181Q2M3W8 571 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 TERB2Q8NHR7 220 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 NAA38Q9BRA0 125 aaKnown RBP2.11□□□□□ -2.07
LEMD3-204ENST00000542032 CST9LQ9H4G1 147 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 LHX9Q9NQ69 397 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 MARCOQ9UEW3 520 aaPredicted RBP2.11□□□□□ -2.07
LEMD3-204ENST00000542032 KLK12Q9UKR0 248 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 FER1L6Q2WGJ9 1857 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 NUP210LQ5VU65 1888 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 NUP214P35658 2090 aaPredicted RBP2.11□□□□□ -2.07
LEMD3-204ENST00000542032 MYH7P12883 1935 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 DENND4CQ5VZ89 1909 aa2.11□□□□□ -2.07
LEMD3-204ENST00000542032 EIF4G3O43432 1585 aaKnown RBP2.1□□□□□ -2.07
LEMD3-204ENST00000542032 BRWD3Q6RI45 1802 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 TRAPPC8Q9Y2L5 1435 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.1□□□□□ -2.07
LEMD3-204ENST00000542032 GRIFINA4D1Z8 144 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 C19orf71A6NCJ1 209 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 C17orf51A8MQB3 221 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 A8MWP6 167 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 UBFD1O14562 309 aaKnown RBP2.1□□□□□ -2.07
LEMD3-204ENST00000542032 NDUFB3O43676 98 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 LY6HO94772 140 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 IGHV3-7P01780 117 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 AKAIN1P0CW23 69 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 HLA-EP13747 358 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 GUCA1AP43080 201 aaPredicted RBP2.1□□□□□ -2.07
LEMD3-204ENST00000542032 FOXA3P55318 350 aaPredicted RBP2.1□□□□□ -2.07
LEMD3-204ENST00000542032 DEFB116Q30KQ4 102 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 CCSMST1Q4G0I0 132 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 ZFP2Q6ZN57 461 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 MIR17HGQ75NE6 70 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 PHF5AQ7RTV0 110 aaKnown RBP2.1□□□□□ -2.07
LEMD3-204ENST00000542032 HIST3H2BBQ8N257 126 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 CYB561D1Q8N8Q1 229 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 DEDD2Q8WXF8 326 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 HIST1H2BLQ99880 126 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 GINS4Q9BRT9 223 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 PSMG3Q9BT73 122 aaPredicted RBP2.1□□□□□ -2.07
LEMD3-204ENST00000542032 UPK3BQ9BT76 320 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 NPCDR1Q9BY65 106 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 BANF2Q9H503 90 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 ZFP30Q9Y2G7 519 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 SOX21Q9Y651 276 aaPredicted RBP2.1□□□□□ -2.07
LEMD3-204ENST00000542032 EML6Q6ZMW3 1958 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 SIPA1L1O43166 1804 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 ECM29Q5VYK3 1845 aa2.1□□□□□ -2.07
LEMD3-204ENST00000542032 SPATA31E1Q6ZUB1 1445 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 VPS8Q8N3P4 1428 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 PRG4Q92954 1404 aaPredicted RBP2.09□□□□□ -2.07
LEMD3-204ENST00000542032 TRGV10A0A0A0MS01 117 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 IGHV3-73A0A0B4J1V6 119 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 LOC100130705A0A1B0GUX0 176 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 ZNF670-ZNF695F2Z2N8 137 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 C19orf84I3L1E1 186 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 K7ERJ3 54 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 HIST1H2BKO60814 126 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 SNAPC5O75971 98 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 NCR2O95944 276 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 LHBP01229 141 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 IGKV1-16P04430 117 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 HIST1H2BJP06899 126 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 CCL5P13501 91 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 MUC1P15941 1255 aaPredicted RBP2.09□□□□□ -2.07
LEMD3-204ENST00000542032 RNASE4P34096 147 aaKnown RBP2.09□□□□□ -2.07
LEMD3-204ENST00000542032 MPV17P39210 176 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 HSD17B12Q53GQ0 312 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 Q5W150 140 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 EIF5AL1Q6IS14 154 aaKnown RBP2.09□□□□□ -2.07
LEMD3-204ENST00000542032 C22orf39Q6P5X5 142 aa2.09□□□□□ -2.07
LEMD3-204ENST00000542032 TEX261Q6UWH6 196 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms