RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 RPL19P84098 196 aaKnown RBP10.9□□□□□ -0.66
PTPN1-202ENST00000541713 PDPNQ86YL7 162 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 FAM222BQ8WU58 562 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 RPEQ96AT9 228 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 C17orf77Q96MU5 243 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 NDUFAF3Q9BU61 184 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 APCSP02743 223 aa10.89□□□□□ -0.67
PTPN1-202ENST00000541713 TMPRSS3P57727 454 aa10.89□□□□□ -0.67
PTPN1-202ENST00000541713 MMDQ15546 238 aa10.89□□□□□ -0.67
PTPN1-202ENST00000541713 PRNTQ86SH4 94 aa10.89□□□□□ -0.67
PTPN1-202ENST00000541713 Q8NA96 180 aa10.89□□□□□ -0.67
PTPN1-202ENST00000541713 HIGD1CA8MV81 97 aa10.89□□□□□ -0.67
PTPN1-202ENST00000541713 TYMSP04818 313 aa10.89□□□□□ -0.67
PTPN1-202ENST00000541713 GATA4P43694 442 aa10.89□□□□□ -0.67
PTPN1-202ENST00000541713 RPL27AP46776 148 aaKnown RBP10.89□□□□□ -0.67
PTPN1-202ENST00000541713 NUDT10Q8NFP7 164 aa10.89□□□□□ -0.67
PTPN1-202ENST00000541713 NUDT11Q96G61 164 aa10.89□□□□□ -0.67
PTPN1-202ENST00000541713 CLEC5AQ9NY25 188 aa10.89□□□□□ -0.67
PTPN1-202ENST00000541713 CDC42EP3Q9UKI2 254 aa10.89□□□□□ -0.67
PTPN1-202ENST00000541713 PPOXP50336 477 aa10.89□□□□□ -0.67
PTPN1-202ENST00000541713 C2orf83Q53S99 150 aa10.89□□□□□ -0.67
PTPN1-202ENST00000541713 OSR1Q8TAX0 266 aaPredicted RBP10.89□□□□□ -0.67
PTPN1-202ENST00000541713 NRN1Q9NPD7 142 aa10.89□□□□□ -0.67
PTPN1-202ENST00000541713 NCBP2LA6PVI3 153 aaKnown RBP10.88□□□□□ -0.67
PTPN1-202ENST00000541713 VSTM5A8MXK1 200 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 IGHV1-8P0DP01 117 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 CDSNQ15517 529 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 CR1LQ2VPA4 569 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 CIARTQ8N365 385 aaPredicted RBP10.88□□□□□ -0.67
PTPN1-202ENST00000541713 FAM167A-AS1Q96KT0 104 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 NEU1Q99519 415 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 PEX7O00628 323 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 HSBP1O75506 76 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 CEACAM4O75871 244 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 LURAP1LQ8IV03 231 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 BCL6BQ8N143 479 aaPredicted RBP10.88□□□□□ -0.67
PTPN1-202ENST00000541713 BET1LQ9NYM9 111 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 BMPR1BO00238 502 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 CCL21O00585 134 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 NBEAP1P0C6P0 100 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 SUB1P53999 127 aaKnown RBP eCLIP10.88□□□□□ -0.679e-7■■■□□ 17.7
PTPN1-202ENST00000541713 LINC00322Q6ZN03 302 aaPredicted RBP10.88□□□□□ -0.67
PTPN1-202ENST00000541713 GOLT1AQ6ZVE7 132 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 SPACA3Q8IXA5 215 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.88□□□□□ -0.67
PTPN1-202ENST00000541713 TXN2Q99757 166 aa10.88□□□□□ -0.67
PTPN1-202ENST00000541713 UTP20O75691 2785 aaKnown RBP10.88□□□□□ -0.67
PTPN1-202ENST00000541713 FAM90A9PA6NNJ1 464 aa10.87□□□□□ -0.67
PTPN1-202ENST00000541713 FXYD7P58549 80 aa10.87□□□□□ -0.67
PTPN1-202ENST00000541713 ZNF833PQ6ZTB9 187 aa10.87□□□□□ -0.67
PTPN1-202ENST00000541713 IGLV2-8P01709 118 aa10.87□□□□□ -0.67
PTPN1-202ENST00000541713 OR5AN1Q8NGI8 311 aa10.87□□□□□ -0.67
PTPN1-202ENST00000541713 ZNF586Q9NXT0 402 aa10.87□□□□□ -0.67
PTPN1-202ENST00000541713 PPIAL4CA0A0B4J2A2 164 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 NDUFS7O75251 213 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 PPIAL4GP0DN37 164 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 CD99P14209 185 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 ZNF841Q6ZN19 808 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 TMEM136Q6ZRR5 245 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 DAZAP1Q96EP5 407 aaKnown RBP10.86□□□□□ -0.67
PTPN1-202ENST00000541713 M0R3E3 92 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 CD3EP07766 207 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 BRS3P32247 399 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 BPIFB3P59826 476 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 TMEM177Q53S58 311 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 COA6Q5JTJ3 125 aaKnown RBP10.86□□□□□ -0.67
PTPN1-202ENST00000541713 MUC15Q8N387 334 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 NUP35Q8NFH5 326 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 RNASEH2CQ8TDP1 164 aaKnown RBP10.86□□□□□ -0.67
PTPN1-202ENST00000541713 ZNF257Q9Y2Q1 563 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 ZFHX3Q15911 3703 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 IGKV1D-37A0A075B6S9 117 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 IGHV3-49A0A0A0MS15 119 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 TCRBV4S1A1TA0A5B7 111 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 GDF5OSQ5U4N7 250 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 ASCL5Q7RTU5 278 aa10.86□□□□□ -0.67
PTPN1-202ENST00000541713 IGHV2-26A0A0B4J1V2 119 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 A0A1W2PS18 150 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 PSG1P11464 419 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 ZNF329Q86UD4 541 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 C22orf15Q8WYQ4 148 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 BORCS7Q96B45 105 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 TMEM133Q9H2Q1 129 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 IGHV3-66A0A0C4DH42 116 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 PDLIM4P50479 330 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 CX3CL1P78423 397 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 TEX36Q5VZQ5 186 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 IGFL3Q6UXB1 125 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 SORL1Q92673 2214 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 M0R143 59 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 M0R2Z0 102 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 TIMM23O14925 209 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 HYPMO75409 117 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 YPEL3P61236 119 aaPredicted RBP10.85□□□□□ -0.67
PTPN1-202ENST00000541713 AARDQ4LEZ3 155 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 DMRTA1Q5VZB9 504 aa10.85□□□□□ -0.67
PTPN1-202ENST00000541713 IGHV3OR16-10A0A075B7F0 116 aa10.84□□□□□ -0.67
PTPN1-202ENST00000541713 SHISA9B4DS77 424 aa10.84□□□□□ -0.67
PTPN1-202ENST00000541713 IGLV2-23P01705 113 aa10.84□□□□□ -0.67
PTPN1-202ENST00000541713 TAS2R60P59551 318 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms