RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 OR4B1Q8NGF8 309 aa13.75□□□□□ -0.21
SPIDR-227ENST00000541342 OR5AN1Q8NGI8 311 aa13.75□□□□□ -0.21
SPIDR-227ENST00000541342 NEU4Q8WWR8 484 aaPredicted RBP13.75□□□□□ -0.21
SPIDR-227ENST00000541342 C19orf24Q9BVV8 132 aa13.75□□□□□ -0.21
SPIDR-227ENST00000541342 SSBP3Q9BWW4 388 aaPredicted RBP13.75□□□□□ -0.21
SPIDR-227ENST00000541342 TAS2R45P59539 299 aa13.75□□□□□ -0.21
SPIDR-227ENST00000541342 GDF5OSQ5U4N7 250 aa13.75□□□□□ -0.21
SPIDR-227ENST00000541342 FAM19A2Q8N3H0 131 aa13.75□□□□□ -0.21
SPIDR-227ENST00000541342 ZNF137PP52743 207 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 OR5B3Q8NH48 314 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 TSKUQ8WUA8 353 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 MBD6Q96DN6 1003 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 NDUFA4L2Q9NRX3 87 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 HLA-DQA1P01909 254 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 PYYP10082 97 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 BTF3P20290 206 aaKnown RBP13.74□□□□□ -0.21
SPIDR-227ENST00000541342 OR8B3Q8NGG8 313 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 OR8B2Q96RD0 313 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 SERTAD4Q9NUC0 356 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 ARHGAP32A7KAX9 2087 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 FLNCQ14315 2725 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 C3orf79P0CE67 100 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 BATFQ16520 125 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 TMEM186Q96B77 213 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 UBTD1Q9HAC8 227 aa13.74□□□□□ -0.21
SPIDR-227ENST00000541342 PPIAL4CA0A0B4J2A2 164 aa13.73□□□□□ -0.21
SPIDR-227ENST00000541342 IZUMO1RA6ND01 250 aa13.73□□□□□ -0.21
SPIDR-227ENST00000541342 CGB1A6NKQ9 187 aa13.73□□□□□ -0.21
SPIDR-227ENST00000541342 NDUFS7O75251 213 aa13.73□□□□□ -0.21
SPIDR-227ENST00000541342 PPIAL4GP0DN37 164 aa13.73□□□□□ -0.21
SPIDR-227ENST00000541342 TFPI2P48307 235 aa13.73□□□□□ -0.21
SPIDR-227ENST00000541342 UBE2L3P68036 154 aaKnown RBP13.73□□□□□ -0.21
SPIDR-227ENST00000541342 GAGE1Q13065 139 aa13.73□□□□□ -0.21
SPIDR-227ENST00000541342 FAM71F2Q6NXP2 309 aa13.73□□□□□ -0.21
SPIDR-227ENST00000541342 C8orf46Q8TAG6 207 aa13.73□□□□□ -0.21
SPIDR-227ENST00000541342 SPATA45Q537H7 98 aa13.73□□□□□ -0.21
SPIDR-227ENST00000541342 C18orf32Q8TCD1 76 aa13.73□□□□□ -0.21
SPIDR-227ENST00000541342 FNDC4Q9H6D8 234 aaPredicted RBP13.73□□□□□ -0.21
SPIDR-227ENST00000541342 IGHV2-26A0A0B4J1V2 119 aa13.72□□□□□ -0.21
SPIDR-227ENST00000541342 C22orf46C9J442 243 aa13.72□□□□□ -0.21
SPIDR-227ENST00000541342 PATE2Q6UY27 113 aa13.72□□□□□ -0.21
SPIDR-227ENST00000541342 SVEP1Q4LDE5 3571 aa13.72□□□□□ -0.21
SPIDR-227ENST00000541342 APOA2P02652 100 aa13.72□□□□□ -0.21
SPIDR-227ENST00000541342 APCSP02743 223 aa13.72□□□□□ -0.21
SPIDR-227ENST00000541342 COX19Q49B96 90 aa13.72□□□□□ -0.21
SPIDR-227ENST00000541342 TIMD4Q96H15 378 aa13.72□□□□□ -0.21
SPIDR-227ENST00000541342 MRPL32Q9BYC8 188 aaKnown RBP13.72□□□□□ -0.21
SPIDR-227ENST00000541342 GOLT1BQ9Y3E0 138 aa13.72□□□□□ -0.21
SPIDR-227ENST00000541342 ATP5IP56385 69 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-227ENST00000541342 ZNF355PQ9NSJ1 428 aa13.72□□□□□ -0.21
SPIDR-227ENST00000541342 TRAV34A0A0B4J273 112 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 IGLV1-47P01700 117 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 IGHV3-48P01763 117 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 PRRX1P54821 245 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 WT1-ASQ06250 92 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 MMDQ15546 238 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 TMEM177Q53S58 311 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 ZNF329Q86UD4 541 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 LY6G5BQ8NDX9 201 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 OSR1Q8TAX0 266 aaPredicted RBP13.71□□□□□ -0.21
SPIDR-227ENST00000541342 HARBI1Q96MB7 349 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 DNAJC4Q9NNZ3 241 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 MRPL36Q9P0J6 103 aaKnown RBP13.71□□□□□ -0.21
SPIDR-227ENST00000541342 IGKV1D-37A0A075B6S9 117 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 HYPMO75409 117 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 IGLC2P0DOY2 106 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 IGLC3P0DOY3 106 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 USF1P22415 310 aaPredicted RBP13.71□□□□□ -0.21
SPIDR-227ENST00000541342 WIPF2Q8TF74 440 aaPredicted RBP13.71□□□□□ -0.21
SPIDR-227ENST00000541342 COMMD5Q9GZQ3 224 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 WNT10AQ9GZT5 417 aa13.71□□□□□ -0.21
SPIDR-227ENST00000541342 REG1AP05451 166 aa13.7□□□□□ -0.22
SPIDR-227ENST00000541342 MAJINQ3KP22 176 aa13.7□□□□□ -0.22
SPIDR-227ENST00000541342 C10orf55Q5SWW7 151 aa13.7□□□□□ -0.22
SPIDR-227ENST00000541342 RUSC1-AS1Q66K80 236 aa13.7□□□□□ -0.22
SPIDR-227ENST00000541342 CACNG8Q8WXS5 425 aa13.7□□□□□ -0.22
SPIDR-227ENST00000541342 C7orf69Q9H7B7 122 aa13.7□□□□□ -0.22
SPIDR-227ENST00000541342 AMMECR1Q9Y4X0 333 aaPredicted RBP13.7□□□□□ -0.22
SPIDR-227ENST00000541342 CACNA1BQ00975 2339 aa13.7□□□□□ -0.22
SPIDR-227ENST00000541342 VWC2LB2RUY7 222 aa13.7□□□□□ -0.22
SPIDR-227ENST00000541342 RPL19P84098 196 aaKnown RBP13.7□□□□□ -0.22
SPIDR-227ENST00000541342 NUP35Q8NFH5 326 aa13.7□□□□□ -0.22
SPIDR-227ENST00000541342 FLYWCH2Q96CP2 140 aaKnown RBP13.7□□□□□ -0.22
SPIDR-227ENST00000541342 RITA1Q96K30 269 aa13.7□□□□□ -0.22
SPIDR-227ENST00000541342 RPL8P62917 257 aaKnown RBP13.69□□□□□ -0.22
SPIDR-227ENST00000541342 PDPNQ86YL7 162 aa13.69□□□□□ -0.22
SPIDR-227ENST00000541342 RBP4P02753 201 aa13.69□□□□□ -0.22
SPIDR-227ENST00000541342 LCN12Q6JVE5 192 aa13.69□□□□□ -0.22
SPIDR-227ENST00000541342 FAM231DQ6ZW35 169 aa13.69□□□□□ -0.22
SPIDR-227ENST00000541342 NUDT10Q8NFP7 164 aa13.69□□□□□ -0.22
SPIDR-227ENST00000541342 FXYD5Q96DB9 178 aa13.69□□□□□ -0.22
SPIDR-227ENST00000541342 NUDT11Q96G61 164 aa13.69□□□□□ -0.22
SPIDR-227ENST00000541342 ONECUT1Q9UBC0 465 aa13.69□□□□□ -0.22
SPIDR-227ENST00000541342 IGLV2-23P01705 113 aa13.69□□□□□ -0.22
SPIDR-227ENST00000541342 OR4C13Q8NGP0 309 aa13.69□□□□□ -0.22
SPIDR-227ENST00000541342 CLEC7AQ9BXN2 247 aa13.69□□□□□ -0.22
SPIDR-227ENST00000541342 INS-IGF2F8WCM5 200 aa13.68□□□□□ -0.22
SPIDR-227ENST00000541342 PEX7O00628 323 aa13.68□□□□□ -0.22
SPIDR-227ENST00000541342 COX7A1P24310 79 aa13.68□□□□□ -0.22
SPIDR-227ENST00000541342 ATOH7Q8N100 152 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms