RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 CD3EP07766 207 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 LOXP28300 417 aaPredicted RBP11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 PRRX1P54821 245 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 RPL8P62917 257 aaKnown RBP11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 MUC21Q5SSG8 566 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 KCNS1Q96KK3 526 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 MALRD1Q5VYJ5 2156 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 DYSFO75923 2080 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 M0R2Z0 102 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 HSBP1O75506 76 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 STAG3L2P0CL84 134 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 STAG3L3P0CL85 134 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 OPRK1P41145 380 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 PPOXP50336 477 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 SLAQ13239 276 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 CT45A1Q5HYN5 189 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 PRR27Q6MZM9 219 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 EBLN2Q6P2I7 272 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 FAM216BQ8N7L0 139 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 OR4S2Q8NH73 311 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 CT45A3Q8NHU0 189 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 NUDT11Q96G61 164 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.62□□□□□ -0.557e-7■■■□□ 18.1
SFSWAP-210ENST00000541286 K7EP13 123 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 BMPR1BO00238 502 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 CD99P14209 185 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 RHOBP62745 196 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 FBXL19-AS1Q494R0 122 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 LHFPL4Q7Z7J7 247 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 TET2Q6N021 2002 aaPredicted RBP11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 FLNAP21333 2647 aaKnown RBP11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 NAV3Q8IVL0 2385 aa11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 VDAC2P45880 294 aaPredicted RBP11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 FOXE3Q13461 319 aa11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 VWC2Q2TAL6 325 aa11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 LINC00173Q6ZV60 143 aa11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 KLHDC1Q8N7A1 406 aa11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 MEGF9Q9H1U4 602 aa11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 TMEM238LA0A1B0GVL6 79 aa11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 J3QR06 171 aa11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 TMPRSS2O15393 492 aa11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 MMP23AO75900 390 aa11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 IGKV1-16P04430 117 aa11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 FOXA3P55318 350 aaPredicted RBP11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 CENPWQ5EE01 88 aa11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 SMIM15Q7Z3B0 74 aa11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 JPT1Q9UK76 154 aa11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 OR51B2Q9Y5P1 312 aa11.61□□□□□ -0.55
SFSWAP-210ENST00000541286 SRRM5B3KS81 715 aa11.6□□□□□ -0.55
SFSWAP-210ENST00000541286 APELAP0DMC3 54 aa11.6□□□□□ -0.55
SFSWAP-210ENST00000541286 GLRXP35754 106 aa11.6□□□□□ -0.55
SFSWAP-210ENST00000541286 OR10W1Q8NGF6 305 aa11.6□□□□□ -0.55
SFSWAP-210ENST00000541286 OR2T6Q8NHC8 308 aa11.6□□□□□ -0.55
SFSWAP-210ENST00000541286 EAF1Q96JC9 268 aaPredicted RBP11.6□□□□□ -0.55
SFSWAP-210ENST00000541286 CDC42EP3Q9UKI2 254 aa11.6□□□□□ -0.55
SFSWAP-210ENST00000541286 CREBBPQ92793 2442 aa11.6□□□□□ -0.55
SFSWAP-210ENST00000541286 A0A087X0K7 114 aa11.6□□□□□ -0.55
SFSWAP-210ENST00000541286 GNG4P50150 75 aa11.6□□□□□ -0.55
SFSWAP-210ENST00000541286 LOXL3P58215 753 aa11.6□□□□□ -0.55
SFSWAP-210ENST00000541286 OR8B2Q96RD0 313 aa11.6□□□□□ -0.55
SFSWAP-210ENST00000541286 V9GYV3 84 aa11.6□□□□□ -0.55
SFSWAP-210ENST00000541286 TRGV10A0A0A0MS01 117 aa11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 J3QKU1 62 aa11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 USF1P22415 310 aaPredicted RBP11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 HSPE1P61604 102 aaKnown RBP11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 TMEM136Q6ZRR5 245 aa11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 IGLC7A0M8Q6 106 aa11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 TMEM238C9JI98 176 aa11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 MPDU1O75352 247 aa11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 MT-CO2P00403 227 aa11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 Q0VG73 95 aa11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 MRPL52Q86TS9 123 aaKnown RBP11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 MUC15Q8N387 334 aa11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 OR4F17Q8NGA8 305 aa11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 OR9G1Q8NH87 305 aa11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 CSTL1Q9H114 145 aa11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 PDZD2O15018 2839 aa11.59□□□□□ -0.55
SFSWAP-210ENST00000541286 HELTA6NFD8 242 aa11.58□□□□□ -0.56
SFSWAP-210ENST00000541286 TOMM40O96008 361 aa11.58□□□□□ -0.56
SFSWAP-210ENST00000541286 IGHV1-46P01743 117 aa11.58□□□□□ -0.56
SFSWAP-210ENST00000541286 APCSP02743 223 aa11.58□□□□□ -0.56
SFSWAP-210ENST00000541286 ZNF138P52744 262 aa11.58□□□□□ -0.56
SFSWAP-210ENST00000541286 PRB3Q04118 309 aaPredicted RBP11.58□□□□□ -0.56
SFSWAP-210ENST00000541286 NABP2Q9BQ15 211 aa11.58□□□□□ -0.56
SFSWAP-210ENST00000541286 MTORP42345 2549 aa11.58□□□□□ -0.56
SFSWAP-210ENST00000541286 GAGE12BA1L429 117 aa11.58□□□□□ -0.56
SFSWAP-210ENST00000541286 C15orf61A6NNL5 157 aa11.58□□□□□ -0.56
SFSWAP-210ENST00000541286 TRAT1Q6PIZ9 186 aa11.58□□□□□ -0.56
SFSWAP-210ENST00000541286 CCL17Q92583 94 aa11.58□□□□□ -0.56
SFSWAP-210ENST00000541286 CUBNO60494 3623 aa11.58□□□□□ -0.56
SFSWAP-210ENST00000541286 TRAV5A0A0B4J249 113 aa11.58□□□□□ -0.56
SFSWAP-210ENST00000541286 TNFAIP6P98066 277 aaPredicted RBP11.58□□□□□ -0.56
SFSWAP-210ENST00000541286 FAM90A1Q86YD7 464 aa11.57□□□□□ -0.56
SFSWAP-210ENST00000541286 H1FXQ92522 213 aaKnown RBP11.57□□□□□ -0.56
SFSWAP-210ENST00000541286 C1orf159Q96HA4 380 aa11.57□□□□□ -0.56
SFSWAP-210ENST00000541286 FNDC4Q9H6D8 234 aaPredicted RBP11.57□□□□□ -0.56
SFSWAP-210ENST00000541286 ZNF355PQ9NSJ1 428 aa11.57□□□□□ -0.56
SFSWAP-210ENST00000541286 IL19Q9UHD0 177 aa11.57□□□□□ -0.56
SFSWAP-210ENST00000541286 IGHV2-26A0A0B4J1V2 119 aa11.57□□□□□ -0.56
SFSWAP-210ENST00000541286 MFAP2P55001 183 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms