RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 FBXL7Q9UJT9 491 aa9.59□□□□□ -0.87
AP003559.1-201ENST00000540906 TMA7Q9Y2S6 64 aaKnown RBP9.59□□□□□ -0.87
AP003559.1-201ENST00000540906 M0R036 132 aa9.59□□□□□ -0.88
AP003559.1-201ENST00000540906 C8orf88P0DMB2 117 aa9.59□□□□□ -0.88
AP003559.1-201ENST00000540906 CST9LP1Q5W188 147 aa9.59□□□□□ -0.88
AP003559.1-201ENST00000540906 LEMD1Q68G75 181 aa9.59□□□□□ -0.88
AP003559.1-201ENST00000540906 OR5AU1Q8NGC0 362 aa9.59□□□□□ -0.88
AP003559.1-201ENST00000540906 OR1L6Q8NGR2 347 aa9.59□□□□□ -0.88
AP003559.1-201ENST00000540906 RPUSD4Q96CM3 377 aaKnown RBP9.59□□□□□ -0.88
AP003559.1-201ENST00000540906 DERL1Q9BUN8 251 aa9.59□□□□□ -0.88
AP003559.1-201ENST00000540906 TEX15Q9BXT5 2789 aa9.58□□□□□ -0.88
AP003559.1-201ENST00000540906 CREBBPQ92793 2442 aa9.58□□□□□ -0.88
AP003559.1-201ENST00000540906 C7orf77A4D0Y5 90 aa9.58□□□□□ -0.88
AP003559.1-201ENST00000540906 SMAD7O15105 426 aaKnown RBP9.58□□□□□ -0.88
AP003559.1-201ENST00000540906 OR7C2O60412 319 aa9.58□□□□□ -0.88
AP003559.1-201ENST00000540906 LYZP61626 148 aa9.58□□□□□ -0.88
AP003559.1-201ENST00000540906 ZNF674Q2M3X9 581 aa9.58□□□□□ -0.88
AP003559.1-201ENST00000540906 IL17RELQ6ZVW7 336 aa9.58□□□□□ -0.88
AP003559.1-201ENST00000540906 LINC00305Q7Z4B0 112 aa9.58□□□□□ -0.88
AP003559.1-201ENST00000540906 NOL4LQ96MY1 436 aaPredicted RBP9.58□□□□□ -0.88
AP003559.1-201ENST00000540906 MS4A10Q96PG2 267 aa9.58□□□□□ -0.88
AP003559.1-201ENST00000540906 SCO2A0A1W2PP80 73 aa9.57□□□□□ -0.88
AP003559.1-201ENST00000540906 PLP1P60201 277 aa9.57□□□□□ -0.88
AP003559.1-201ENST00000540906 KLK9Q2XQG4 91 aa9.57□□□□□ -0.88
AP003559.1-201ENST00000540906 OR1L4Q8NGR5 311 aa9.57□□□□□ -0.88
AP003559.1-201ENST00000540906 SUN5Q8TC36 379 aa9.57□□□□□ -0.88
AP003559.1-201ENST00000540906 CHRDL1Q9BU40 450 aa9.57□□□□□ -0.88
AP003559.1-201ENST00000540906 MRPL32Q9BYC8 188 aaKnown RBP9.57□□□□□ -0.88
AP003559.1-201ENST00000540906 PARLQ9H300 379 aa9.57□□□□□ -0.88
AP003559.1-201ENST00000540906 C21orf62Q9NYP8 219 aa9.57□□□□□ -0.88
AP003559.1-201ENST00000540906 KLK9Q9UKQ9 250 aa9.57□□□□□ -0.88
AP003559.1-201ENST00000540906 TRBV9A0A0B4J1U6 114 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 TRAV41A0A0B4J266 112 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 ADMP35318 185 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 MFAP4P55083 255 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 BPIFB3P59826 476 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 TMEM95Q3KNT9 176 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 C19orf24Q9BVV8 132 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 RPS10P5Q9NQ39 176 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 ANK3Q12955 4377 aaKnown RBP9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 OR2T8A6NH00 312 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 ZNF727A8MUV8 499 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 GGTLC3B5MD39 225 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 HYPMO75409 117 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 IER3P46695 156 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 CRIP2P52943 208 aaPredicted RBP9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 RHOGP84095 191 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 Q56UQ5 140 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 CYB5R2Q6BCY4 276 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 FXYD5Q96DB9 178 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 CCDC140Q96MF4 163 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 PFDN5Q99471 154 aa9.56□□□□□ -0.88
AP003559.1-201ENST00000540906 TMEM250H0YL14 139 aa9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 H3BTX0 84 aa9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 GNG7O60262 68 aa9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 TOMM40O96008 361 aa9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 IGHG2P01859 326 aa9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 CTSGP08311 255 aa9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 RD3LP0DJH9 198 aa9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 UBE2L3P68036 154 aaKnown RBP9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 KRTAP1-1Q07627 177 aa9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 USF2Q15853 346 aaPredicted RBP9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 C15orf32Q32M92 178 aa9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 PQLC2Q6ZP29 291 aa9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 C16orf82Q7Z2V1 217 aa9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 ZNF491Q8N8L2 437 aa9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 NANPQ8TBE9 248 aa9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 ZNF502Q8TBZ5 544 aa9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 SMIM7Q9BQ49 75 aa9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 MRPL27Q9P0M9 148 aaKnown RBP9.55□□□□□ -0.88
AP003559.1-201ENST00000540906 IGHV3OR16-8A0A075B7F1 116 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 IGHV3-35A0A0C4DH35 117 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 WI2-2373I1.2A0A1W2PRP0 233 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 NDUFB4O95168 129 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 TAS2R45P59539 299 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 TVP23CQ96ET8 276 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 RNF2Q99496 336 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 NIPSNAP3BQ9BS92 247 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 PAXXQ9BUH6 204 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 OR51M1Q9H341 326 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 SDF2L1Q9HCN8 221 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 AURKAIP1Q9NWT8 199 aaPredicted RBP9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 FLNAP21333 2647 aaKnown RBP9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 TRBV20OR9-2A0A075B6H5 130 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 ELOA3CA0A087WX78 387 aaPredicted RBP9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 PGPEP1LA6NFU8 196 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 IL4P05112 153 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 GP9P14770 177 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 GPR183P32249 361 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 TAGLN2P37802 199 aaKnown RBP9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 LCNL1Q6ZST4 164 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 C9orf139Q6ZV77 190 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 ISOC2Q96AB3 205 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 SLC25A39Q9BZJ4 359 aaPredicted RBP9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 TMEM167BQ9NRX6 74 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 HIGD1AQ9Y241 93 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 MXRA5Q9NR99 2828 aa9.54□□□□□ -0.88
AP003559.1-201ENST00000540906 TSPAN4O14817 238 aa9.53□□□□□ -0.88
AP003559.1-201ENST00000540906 IGF1P05019 195 aa9.53□□□□□ -0.88
AP003559.1-201ENST00000540906 HIST1H1BP16401 226 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms