RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 NRARPQ7Z6K4 114 aa12.54□□□□□ -0.4
CD9-209ENST00000540891 THAP8Q8NA92 274 aa12.54□□□□□ -0.4
CD9-209ENST00000540891 ENKURQ8TC29 256 aa12.54□□□□□ -0.4
CD9-209ENST00000540891 SPATA25Q9BR10 227 aa12.54□□□□□ -0.4
CD9-209ENST00000540891 TMEM231Q9H6L2 316 aa12.54□□□□□ -0.4
CD9-209ENST00000540891 RETNQ9HD89 108 aa12.54□□□□□ -0.4
CD9-209ENST00000540891 TENM3Q9P273 2699 aa12.53□□□□□ -0.4
CD9-209ENST00000540891 CCNKO75909 580 aa12.53□□□□□ -0.4
CD9-209ENST00000540891 TMEM14EPQ6UXP3 125 aa12.53□□□□□ -0.4
CD9-209ENST00000540891 ACOT7LQ6ZUV0 252 aa12.53□□□□□ -0.4
CD9-209ENST00000540891 OR51G1Q8NGK1 321 aa12.53□□□□□ -0.4
CD9-209ENST00000540891 TRGV9Q99603 122 aa12.53□□□□□ -0.4
CD9-209ENST00000540891 MS4A6AQ9H2W1 248 aa12.53□□□□□ -0.4
CD9-209ENST00000540891 ZNF124Q15973 351 aa12.52□□□□□ -0.41
CD9-209ENST00000540891 C16orf54Q6UWD8 224 aa12.52□□□□□ -0.41
CD9-209ENST00000540891 WFDC3Q8IUB2 231 aa12.52□□□□□ -0.41
CD9-209ENST00000540891 APRG1Q8IVJ8 170 aa12.52□□□□□ -0.41
CD9-209ENST00000540891 FAM24BQ8N5W8 94 aa12.52□□□□□ -0.41
CD9-209ENST00000540891 GLMPQ8WWB7 406 aa12.52□□□□□ -0.41
CD9-209ENST00000540891 RNF125Q96EQ8 232 aa12.52□□□□□ -0.41
CD9-209ENST00000540891 RAB40CQ96S21 281 aa12.52□□□□□ -0.41
CD9-209ENST00000540891 GGTLC1Q9BX51 225 aa12.52□□□□□ -0.41
CD9-209ENST00000540891 MAP6D1Q9H9H5 199 aa12.52□□□□□ -0.41
CD9-209ENST00000540891 STAB2Q8WWQ8 2551 aa12.51□□□□□ -0.41
CD9-209ENST00000540891 LOC102724200A0A096LPH7 203 aaPredicted RBP12.51□□□□□ -0.41
CD9-209ENST00000540891 TRAV2A0A0B4J234 112 aa12.51□□□□□ -0.41
CD9-209ENST00000540891 C7orf66A4D0T2 115 aa12.51□□□□□ -0.41
CD9-209ENST00000540891 FAM25EA8MYX2 175 aa12.51□□□□□ -0.41
CD9-209ENST00000540891 BUB3O43684 328 aa12.51□□□□□ -0.41
CD9-209ENST00000540891 TSC22D2O75157 780 aa12.51□□□□□ -0.41
CD9-209ENST00000540891 TAS2R30P59541 319 aa12.51□□□□□ -0.41
CD9-209ENST00000540891 PAFAH1B2P68402 229 aa12.51□□□□□ -0.41
CD9-209ENST00000540891 IL15RAQ13261 267 aa12.51□□□□□ -0.41
CD9-209ENST00000540891 STPG3Q8N7X2 389 aa12.51□□□□□ -0.41
CD9-209ENST00000540891 C11orf1Q9H5F2 150 aa12.51□□□□□ -0.41
CD9-209ENST00000540891 RABAC1Q9UI14 185 aa12.51□□□□□ -0.41
CD9-209ENST00000540891 C5orf51A6NDU8 294 aa12.5□□□□□ -0.41
CD9-209ENST00000540891 K7EPK0 472 aa12.5□□□□□ -0.41
CD9-209ENST00000540891 K7EQG2 157 aa12.5□□□□□ -0.41
CD9-209ENST00000540891 METTL15P1P0C7V9 234 aa12.5□□□□□ -0.41
CD9-209ENST00000540891 RPL11P62913 178 aaKnown RBP12.5□□□□□ -0.41
CD9-209ENST00000540891 OR2F1Q13607 317 aa12.5□□□□□ -0.41
CD9-209ENST00000540891 OR8G2PQ6IF36 304 aa12.5□□□□□ -0.41
CD9-209ENST00000540891 TMEM182Q6ZP80 229 aaPredicted RBP12.5□□□□□ -0.41
CD9-209ENST00000540891 NARS2Q96I59 477 aaKnown RBP12.5□□□□□ -0.41
CD9-209ENST00000540891 C2orf50Q96LR7 162 aa12.5□□□□□ -0.41
CD9-209ENST00000540891 INMT-MINDY4F8WBC2 141 aa12.49□□□□□ -0.41
CD9-209ENST00000540891 DNASE2O00115 360 aaPredicted RBP12.49□□□□□ -0.41
CD9-209ENST00000540891 ARL16Q0P5N6 197 aa12.49□□□□□ -0.41
CD9-209ENST00000540891 TMEM144Q7Z5S9 345 aa12.49□□□□□ -0.41
CD9-209ENST00000540891 STXBP6Q8NFX7 210 aa12.49□□□□□ -0.41
CD9-209ENST00000540891 DCANP1Q8TF63 244 aa12.49□□□□□ -0.41
CD9-209ENST00000540891 GRAMD2BQ96HH9 432 aa12.49□□□□□ -0.41
CD9-209ENST00000540891 MARVELD1Q9BSK0 173 aa12.49□□□□□ -0.41
CD9-209ENST00000540891 PBDC1Q9BVG4 233 aa12.49□□□□□ -0.41
CD9-209ENST00000540891 EDA2RQ9HAV5 297 aa12.49□□□□□ -0.41
CD9-209ENST00000540891 SNRPGP15A8MWD9 76 aa12.48□□□□□ -0.41
CD9-209ENST00000540891 FABP1P07148 127 aa12.48□□□□□ -0.41
CD9-209ENST00000540891 GATA2P23769 480 aaPredicted RBP12.48□□□□□ -0.41
CD9-209ENST00000540891 EIF2B2P49770 351 aaKnown RBP12.48□□□□□ -0.41
CD9-209ENST00000540891 CMC4P56277 68 aaPredicted RBP12.48□□□□□ -0.41
CD9-209ENST00000540891 LYZP61626 148 aa12.48□□□□□ -0.41
CD9-209ENST00000540891 AKR1C1Q04828 323 aa12.48□□□□□ -0.41
CD9-209ENST00000540891 GSG1LQ6UXU4 331 aa12.48□□□□□ -0.41
CD9-209ENST00000540891 LSM5Q9Y4Y9 91 aaKnown RBP12.48□□□□□ -0.41
CD9-209ENST00000540891 HELTA6NFD8 242 aa12.47□□□□□ -0.41
CD9-209ENST00000540891 DEFA1P59665 94 aa12.47□□□□□ -0.41
CD9-209ENST00000540891 DEFA3P59666 94 aa12.47□□□□□ -0.41
CD9-209ENST00000540891 DEFB131AP59861 70 aa12.47□□□□□ -0.41
CD9-209ENST00000540891 RRAS2P62070 204 aaPredicted RBP12.47□□□□□ -0.41
CD9-209ENST00000540891 DLK1P80370 383 aa12.47□□□□□ -0.41
CD9-209ENST00000540891 GPN1Q9HCN4 374 aaPredicted RBP12.47□□□□□ -0.41
CD9-209ENST00000540891 SMCO3A2RU48 225 aa12.46□□□□□ -0.41
CD9-209ENST00000540891 FNDC10F2Z333 226 aa12.46□□□□□ -0.41
CD9-209ENST00000540891 PRAF2O60831 178 aa12.46□□□□□ -0.41
CD9-209ENST00000540891 RPL35AP18077 110 aaKnown RBP12.46□□□□□ -0.41
CD9-209ENST00000540891 RAB32Q13637 225 aa12.46□□□□□ -0.41
CD9-209ENST00000540891 LEMD1Q68G75 181 aa12.46□□□□□ -0.41
CD9-209ENST00000540891 OR10P1Q8NGE3 313 aa12.46□□□□□ -0.41
CD9-209ENST00000540891 L7N2F9 121 aa12.45□□□□□ -0.42
CD9-209ENST00000540891 SIX6O95475 246 aa12.45□□□□□ -0.42
CD9-209ENST00000540891 AP2S1P53680 142 aaPredicted RBP12.45□□□□□ -0.42
CD9-209ENST00000540891 VAMP2P63027 116 aa12.45□□□□□ -0.42
CD9-209ENST00000540891 SIGLEC15Q6ZMC9 328 aa12.45□□□□□ -0.42
CD9-209ENST00000540891 CYP2G1PQ6ZSU1 146 aa12.45□□□□□ -0.42
CD9-209ENST00000540891 OVOL2Q9BRP0 275 aa12.45□□□□□ -0.42
CD9-209ENST00000540891 DNAH7Q8WXX0 4024 aa12.44□□□□□ -0.42
CD9-209ENST00000540891 KIR2DL5BA0A0G2JN68 375 aa12.44□□□□□ -0.42
CD9-209ENST00000540891 KIR2DL5BA0A0G2JPC4 375 aa12.44□□□□□ -0.42
CD9-209ENST00000540891 FAM24AA6NFZ4 105 aa12.44□□□□□ -0.42
CD9-209ENST00000540891 GOSR2O14653 212 aa12.44□□□□□ -0.42
CD9-209ENST00000540891 CFDP00746 253 aaPredicted RBP12.44□□□□□ -0.42
CD9-209ENST00000540891 ZNF688P0C7X2 276 aa12.44□□□□□ -0.42
CD9-209ENST00000540891 NUP62P37198 522 aaPredicted RBP12.44□□□□□ -0.42
CD9-209ENST00000540891 APOC4P55056 127 aa12.44□□□□□ -0.42
CD9-209ENST00000540891 S100A10P60903 97 aa12.44□□□□□ -0.42
CD9-209ENST00000540891 KIR2DL5AQ8N109 375 aa12.44□□□□□ -0.42
CD9-209ENST00000540891 KIR2DL5BQ8NHK3 375 aa12.44□□□□□ -0.42
CD9-209ENST00000540891 NPVFQ9HCQ7 196 aa12.44□□□□□ -0.42
CD9-209ENST00000540891 NBEAL2Q6ZNJ1 2754 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms