RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	TMEM186	Q96B77	213 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PLEKHA3	Q9HB20	300 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	NPVF	Q9HCQ7	196 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ZNF355P	Q9NSJ1	428 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SPG11	Q96JI7	2443 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TRAV5	A0A0B4J249	113 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TOX4	O94842	621 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SRD5A1	P18405	259 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	COX7A1	P24310	79 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	DUT	P33316	252 aa	Known RBP	4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	VDAC2	P45880	294 aa	Predicted RBP	4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MFAP2	P55001	183 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	LDLRAD2	Q5SZI1	272 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TEPP	Q6URK8	271 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	WDR82	Q6UXN9	313 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	LHFPL4	Q7Z7J7	247 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	C18orf32	Q8TCD1	76 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TMEM140	Q9NV12	185 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TCF19	Q9Y242	345 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	GGTLC3	B5MD39	225 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	AMY1A	P04745	511 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	FOXA3	P55318	350 aa	Predicted RBP	4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	LOXL1	Q08397	574 aa	Predicted RBP	4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	OR10J3	Q5JRS4	329 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	GDF5OS	Q5U4N7	250 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	WDR73	Q6P4I2	378 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	C1orf229	Q6ZS94	237 aa	Predicted RBP	4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	LINC00173	Q6ZV60	143 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	WASHC3	Q9Y3C0	194 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ARL2-SNX15	V9GYD0	113 aa		4.59	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ROS1	P08922	2347 aa		4.59	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	hDV102S1	A0JD36	115 aa		4.59	□□□□□ -1.68
RAPGEF4-215	ENST00000540783		C9JCJ5	164 aa		4.59	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	PRSS46	E5RG02	174 aa		4.59	□□□□□ -1.68
RAPGEF4-215	ENST00000540783		M0R1W7	72 aa		4.59	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	MPDU1	O75352	247 aa		4.59	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	MT-CO2	P00403	227 aa		4.59	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	IGHV3-48	P01763	117 aa		4.59	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	IGHV4-39	P01824	125 aa		4.59	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	PSG1	P11464	419 aa		4.59	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	ZNF134	P52741	427 aa		4.59	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	TMEM249	Q2WGJ8	235 aa		4.59	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	PMCHL2	Q9BQD1	86 aa		4.59	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	TXNDC17	Q9BRA2	123 aa		4.59	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	TRAV9-1	A0A075B6T8	112 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	TRAV9-2	A0A087WT02	112 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	TRBV9	A0A0B4J1U6	114 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	FAM181B	A6NEQ2	426 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	SNAI2	O43623	268 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	NUDT3	O95989	172 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	PRB4	P10163	310 aa	Predicted RBP	4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	NPY1R	P25929	384 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	CDKN1B	P46527	198 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	SLC35E4	Q6ICL7	350 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	C16orf54	Q6UWD8	224 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	OR4F17	Q8NGA8	305 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	OR52E5	Q8NH55	327 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	ZNF503	Q96F45	646 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	NABP2	Q9BQ15	211 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	HIF1AN	Q9NWT6	349 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	LSM4	Q9Y4Z0	139 aa	Known RBP	4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	LINC00312	Q9Y6C7	94 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	KIAA1549	Q9HCM3	1950 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	IGHV2-26	A0A0B4J1V2	119 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	IGLC7	A0M8Q6	106 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	OR2T8	A6NH00	312 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	CORT	O00230	105 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	IGLV2-8	P01709	118 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	MT-ND6	P03923	174 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	HTR1D	P28221	377 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	HCFC1	P51610	2035 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	MORN5	Q5VZ52	161 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	ZNF841	Q6ZN19	808 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	COL27A1	Q8IZC6	1860 aa	Predicted RBP	4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	OR2T6	Q8NHC8	308 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	C11orf52	Q96A22	123 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	HEATR1	Q9H583	2144 aa	Known RBP	4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	PIEZO2	Q9H5I5	2752 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	LYNX1	G3V0Z9	82 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	ITGB1BP1	O14713	200 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	TOMM40	O96008	361 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	HLA-DQA1	P01909	254 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	LINC00869	P0C866	280 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	LYNX1	P0DP58	116 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	TCTA	P57738	103 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	ARF6	P62330	175 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	RAB31	Q13636	194 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	C11orf53	Q8IXP5	236 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	OR2D3	Q8NGH3	330 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	OR9G1	Q8NH87	305 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	IDI2-AS1	Q9NZ38	188 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	RPH3AL	Q9UNE2	315 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	MRPS16	Q9Y3D3	137 aa	Known RBP	4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	DCHS1	Q96JQ0	3298 aa		4.58	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	IGKV1OR2-108	A0A075B7D4	117 aa		4.57	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	SAA2-SAA4	A0A096LPE2	208 aa		4.57	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	IGHV2-70D	A0A0C4DH43	119 aa		4.57	□□□□□ -1.68
RAPGEF4-215	ENST00000540783	OOSP1	A8MZH6	123 aa		4.57	□□□□□ -1.68

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