RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 PPP5D1E7EU14 171 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 OR2T1O43869 369 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 PFDN1O60925 122 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 IFNA21P01568 189 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 CRHP06850 196 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 FKBP2P26885 142 aaKnown RBP0.65□□□□□ -2.31
MDM2-227ENST00000540709 GLRXP35754 106 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 CRYBA4P53673 196 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 TMBIM6P55061 237 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 DR1Q01658 176 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 ELOBQ15370 118 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 TSNQ15631 228 aaKnown RBP0.65□□□□□ -2.31
MDM2-227ENST00000540709 RRN3P1Q2M238 152 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 SPANXN5Q5MJ07 72 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 BRMS1LQ5PSV4 323 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 EIF5AL1Q6IS14 154 aaKnown RBP0.65□□□□□ -2.31
MDM2-227ENST00000540709 DCUN1D2Q6PH85 259 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 Q6ZQT0 140 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 SMIM15Q7Z3B0 74 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 LYG2Q86SG7 212 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 PHF13Q86YI8 300 aaPredicted RBP0.65□□□□□ -2.31
MDM2-227ENST00000540709 DYNAPQ8N1N2 210 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 EXOC3-AS1Q8N2X6 119 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 C12orf45Q8N5I9 185 aaPredicted RBP0.65□□□□□ -2.31
MDM2-227ENST00000540709 OR13D1Q8NGV5 346 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 OR2T35Q8NGX2 323 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 OR2T10Q8NGZ9 312 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 OR4K15Q8NH41 348 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 PPTC7Q8NI37 304 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 GRPEL2Q8TAA5 225 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 AQP3Q92482 292 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 SLAMF6Q96DU3 332 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 MALSU1Q96EH3 234 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 YPEL2Q96QA6 119 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 LYSMD1Q96S90 227 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 GINS3Q9BRX5 216 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 NPCDR1Q9BY65 106 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 OR2J1Q9GZK6 312 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 LYRM2Q9NU23 88 aaPredicted RBP0.65□□□□□ -2.31
MDM2-227ENST00000540709 ACER3Q9NUN7 267 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 NHP2Q9NX24 153 aaKnown RBP0.65□□□□□ -2.31
MDM2-227ENST00000540709 TAS2R4Q9NYW5 299 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 ZNF469Q96JG9 3925 aaPredicted RBP0.65□□□□□ -2.31
MDM2-227ENST00000540709 FN1P02751 2386 aaKnown RBP0.65□□□□□ -2.31
MDM2-227ENST00000540709 CCDC88AQ3V6T2 1871 aa0.65□□□□□ -2.31
MDM2-227ENST00000540709 MIA2Q96PC5 1412 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 HECW1Q76N89 1606 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 TRAV1-1A0A0B4J248 108 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 A0A1B0GV72 72 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 MAP1LC3B2A6NCE7 125 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 H0YJX3 145 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 NDUFB3O43676 98 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 MFSD11O43934 449 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 PROSCO94903 275 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 UBL3O95164 117 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 GADD45GO95257 159 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 IFNA14P01570 189 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 C1QBP02746 253 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 SHBGP04278 402 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 RPSAP08865 295 aaKnown RBP0.64□□□□□ -2.31
MDM2-227ENST00000540709 ASAH2BP0C7U1 165 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 COX6A1P12074 109 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 CYBAP13498 195 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 OGNP20774 298 aaKnown RBP0.64□□□□□ -2.31
MDM2-227ENST00000540709 S100GP29377 79 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 UBE2BP63146 152 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 RHOGP84095 191 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 MYL5Q02045 173 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 ZNF846Q147U1 533 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 SOSTDC1Q6X4U4 206 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 FP248Q71RG6 208 aaPredicted RBP0.64□□□□□ -2.31
MDM2-227ENST00000540709 GRINAQ7Z429 371 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 DEFB128Q7Z7B8 93 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 PDZD9Q8IXQ8 264 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 SLC30A7Q8NEW0 376 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 OR4D11Q8NGI4 311 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 PRADC1Q9BSG0 188 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 CCDC32Q9BV29 185 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 MAP1LC3BQ9GZQ8 125 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 SH3BGRL3Q9H299 93 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 BOLA2Q9H3K6 86 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 BCL2L10Q9HD36 194 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 OR5AC2Q9NZP5 309 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 EPDR1Q9UM22 224 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 PCF11O94913 1555 aaKnown RBP0.64□□□□□ -2.31
MDM2-227ENST00000540709 SCN9AQ15858 1988 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 FMN1Q68DA7 1419 aa0.64□□□□□ -2.31
MDM2-227ENST00000540709 MAST2Q6P0Q8 1798 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 SCAF11Q99590 1463 aaKnown RBP0.63□□□□□ -2.31
MDM2-227ENST00000540709 EIF3AQ14152 1382 aaKnown RBP0.63□□□□□ -2.31
MDM2-227ENST00000540709 GNG14A0A1W2PPG7 69 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 ODAMA1E959 279 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 H3BQV1 296 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 TMEM256-PLSCR3K7ERE1 68 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 M0R378 163 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 GPR31O00270 319 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 TIMM17BO60830 172 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 PIAS1O75925 651 aa0.63□□□□□ -2.31
MDM2-227ENST00000540709 CTSDP07339 412 aaPredicted RBP0.63□□□□□ -2.31
MDM2-227ENST00000540709 CXCL1P09341 107 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms