RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 TNFRSF1AP19438 455 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 PLNP26678 52 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 SRSF1Q07955 248 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTPRD-214ENST00000540109 COLCA1Q6ZS62 124 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 FAM231DQ6ZW35 169 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 V9GYY9 64 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 RALGAPA1Q6GYQ0 2036 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 IGHV3-15A0A0B4J1V0 119 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 hCG_38984A0A1B0GV85 526 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 J3KT08 172 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 PPIFP30405 207 aaKnown RBP5.04□□□□□ -1.6
PTPRD-214ENST00000540109 MDS2Q8NDY4 140 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 DUX5Q96PT3 197 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 WDR83OSQ9Y284 106 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 IGLC7A0M8Q6 106 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 BVES-AS1Q5T3Y7 98 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 OCC1Q8TAD7 63 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 TMEM230Q96A57 120 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 PI4KAP42356 2102 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 A0A1W2PS18 150 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 F5H697 171 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 TIMM8AO60220 97 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-214ENST00000540109 NDUFA3O95167 84 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 IGLL1P15814 213 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 HES7Q9BYE0 225 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 PGLYRP1O75594 196 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-214ENST00000540109 TFF3Q07654 80 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 ZNF56Q15929 161 aa5.04□□□□□ -1.6
PTPRD-214ENST00000540109 TRAV2A0A0B4J234 112 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 YPEL1O60688 119 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 DNAL4O96015 105 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 PLAUP00749 431 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 RBP4P02753 201 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 PSG4Q00888 419 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 PIP4P1Q86T03 277 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 LYZL4Q96KX0 146 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 YPEL2Q96QA6 119 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 NPCDR1Q9BY65 106 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 TRAV12-3A0A0B4J271 114 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 G3V4G9 280 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 TRIP6Q15654 476 aaKnown RBP5.03□□□□□ -1.6
PTPRD-214ENST00000540109 JPT1Q9UK76 154 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 SEC16AO15027 2179 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 K7EMI3 77 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 PRSS8Q16651 343 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 FAM90A1Q86YD7 464 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 WIPF2Q8TF74 440 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-214ENST00000540109 RNF183Q96D59 192 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 ABHD17AQ96GS6 310 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 DECR2Q9NUI1 292 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 HIGD1AQ9Y241 93 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 CENPFP49454 3210 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 TRAV17A0A0B4J275 112 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 IGKV1-9A0A0C4DH69 117 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 CDX4O14627 284 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-214ENST00000540109 RRHO14718 337 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 B4GALT1P15291 398 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 ANOS1P23352 680 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 STPG1Q5TH74 334 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 SRSF12Q8WXF0 261 aaKnown RBP5.03□□□□□ -1.6
PTPRD-214ENST00000540109 CXXC4Q9H2H0 198 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 TRBV6-6A0A0A6YYG2 114 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 LOC101059948A0A1B0GTJ6 334 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 A0A1W2PPM0 123 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 SMAD7O15105 426 aaKnown RBP5.03□□□□□ -1.6
PTPRD-214ENST00000540109 RNASE1P07998 156 aaKnown RBP5.03□□□□□ -1.6
PTPRD-214ENST00000540109 MAGEA5P43359 124 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 LYZP61626 148 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 RPL11P62913 178 aaKnown RBP5.03□□□□□ -1.6
PTPRD-214ENST00000540109 C2orf83Q53S99 150 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 CCDC144NLQ6NUI1 221 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 ASCL5Q7RTU5 278 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 SH2D6Q7Z4S9 175 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 DEPPQ9NTK1 212 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 ASXL3Q9C0F0 2248 aa5.03□□□□□ -1.6
PTPRD-214ENST00000540109 A0A096LPE4 126 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 A0A1W2PPZ6 126 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 F2Z2F3 143 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 SYS1-DBNDD2H3BUS1 97 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 CGAP01215 116 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 WNT2P09544 360 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 NBEAP1P0C6P0 100 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 FAM90A2PQ658T7 463 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 PRSS57Q6UWY2 283 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 H3BMG7 143 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 H7C1H1 209 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 ZG16O60844 167 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 SCTP09683 121 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 PRDX2P32119 198 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 HOXA4Q00056 320 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-214ENST00000540109 KLRD1Q13241 179 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 Q6ZS92 163 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 SARAFQ96BY9 339 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 C1QTNF4Q9BXJ3 329 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 RETNQ9HD89 108 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 ZNF492Q9P255 531 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 KIAA1549Q9HCM3 1950 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 TRGV5A0A0B4J1U4 118 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 ZNF818PQ6ZRF7 136 aa5.02□□□□□ -1.61
PTPRD-214ENST00000540109 REPIN1Q9BWE0 567 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms