RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ZFP92A6NM28 416 aa13.91□□□□□ -0.18
TNFRSF1A-212ENST00000539372 SFT2D2O95562 160 aa13.91□□□□□ -0.18
TNFRSF1A-212ENST00000539372 GPX4P36969 197 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-212ENST00000539372 AP2S1P53680 142 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-212ENST00000539372 NANOS2P60321 138 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1A-212ENST00000539372 ZNF90Q03938 601 aa13.91□□□□□ -0.18
TNFRSF1A-212ENST00000539372 SPANXN2Q5MJ10 180 aa13.91□□□□□ -0.18
TNFRSF1A-212ENST00000539372 LRTM2Q8N967 370 aa13.91□□□□□ -0.18
TNFRSF1A-212ENST00000539372 PHLDA1Q8WV24 401 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-212ENST00000539372 RNF125Q96EQ8 232 aa13.91□□□□□ -0.18
TNFRSF1A-212ENST00000539372 SRRQ9GZT4 340 aa13.91□□□□□ -0.18
TNFRSF1A-212ENST00000539372 KLK5Q9Y337 293 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-212ENST00000539372 IGKV1D-37A0A075B6S9 117 aa13.9□□□□□ -0.18
TNFRSF1A-212ENST00000539372 BUB3O43684 328 aa13.9□□□□□ -0.18
TNFRSF1A-212ENST00000539372 HOXB5P09067 269 aa13.9□□□□□ -0.18
TNFRSF1A-212ENST00000539372 C4BPBP20851 252 aa13.9□□□□□ -0.18
TNFRSF1A-212ENST00000539372 ATP5IP56385 69 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1A-212ENST00000539372 SIGLEC15Q6ZMC9 328 aa13.9□□□□□ -0.18
TNFRSF1A-212ENST00000539372 CENPSQ8N2Z9 138 aa13.9□□□□□ -0.18
TNFRSF1A-212ENST00000539372 DEDD2Q8WXF8 326 aa13.9□□□□□ -0.18
TNFRSF1A-212ENST00000539372 MAGT1Q9H0U3 335 aa13.9□□□□□ -0.18
TNFRSF1A-212ENST00000539372 C11orf68Q9H3H3 251 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1A-212ENST00000539372 FBXL17Q9UF56 701 aa13.9□□□□□ -0.18
TNFRSF1A-212ENST00000539372 AGRNO00468 2067 aa13.89□□□□□ -0.19
TNFRSF1A-212ENST00000539372 FAM90A26D6RGX4 464 aa13.89□□□□□ -0.19
TNFRSF1A-212ENST00000539372 SLC25A6P12236 298 aa13.89□□□□□ -0.19
TNFRSF1A-212ENST00000539372 C11orf45Q8TAV5 145 aa13.89□□□□□ -0.19
TNFRSF1A-212ENST00000539372 RAB40CQ96S21 281 aa13.89□□□□□ -0.19
TNFRSF1A-212ENST00000539372 NRN1Q9NPD7 142 aa13.89□□□□□ -0.19
TNFRSF1A-212ENST00000539372 TMED3Q9Y3Q3 217 aa13.89□□□□□ -0.19
TNFRSF1A-212ENST00000539372 ZNF701M0R085 212 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1A-212ENST00000539372 MED6O75586 246 aa13.88□□□□□ -0.19
TNFRSF1A-212ENST00000539372 SPP1P10451 314 aa13.88□□□□□ -0.19
TNFRSF1A-212ENST00000539372 LYZP61626 148 aa13.88□□□□□ -0.19
TNFRSF1A-212ENST00000539372 SNRPD3P62318 126 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1A-212ENST00000539372 RAB11AP62491 216 aa13.88□□□□□ -0.19
TNFRSF1A-212ENST00000539372 OR2F1Q13607 317 aa13.88□□□□□ -0.19
TNFRSF1A-212ENST00000539372 BAK1Q16611 211 aa13.88□□□□□ -0.19
TNFRSF1A-212ENST00000539372 MORN3Q6PF18 240 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1A-212ENST00000539372 CLEC5AQ9NY25 188 aa13.88□□□□□ -0.19
TNFRSF1A-212ENST00000539372 LINC00854A0A1B0GVQ3 168 aa13.87□□□□□ -0.19
TNFRSF1A-212ENST00000539372 INPP1P49441 399 aa13.87□□□□□ -0.19
TNFRSF1A-212ENST00000539372 GGNBP1Q5YKI7 109 aa13.87□□□□□ -0.19
TNFRSF1A-212ENST00000539372 TRIQKQ629K1 86 aa13.87□□□□□ -0.19
TNFRSF1A-212ENST00000539372 WRBO00258 174 aa13.86□□□□□ -0.19
TNFRSF1A-212ENST00000539372 SYNGR2O43760 224 aa13.86□□□□□ -0.19
TNFRSF1A-212ENST00000539372 OR8G2PQ6IF36 304 aa13.86□□□□□ -0.19
TNFRSF1A-212ENST00000539372 Q8NAQ8 132 aa13.86□□□□□ -0.19
TNFRSF1A-212ENST00000539372 MFFQ9GZY8 342 aa13.86□□□□□ -0.19
TNFRSF1A-212ENST00000539372 FLVCR2Q9UPI3 526 aa13.86□□□□□ -0.19
TNFRSF1A-212ENST00000539372 IGHV4-28A0A0C4DH34 117 aa13.85□□□□□ -0.19
TNFRSF1A-212ENST00000539372 SNRPGP15A8MWD9 76 aa13.85□□□□□ -0.19
TNFRSF1A-212ENST00000539372 FABP1P07148 127 aa13.85□□□□□ -0.19
TNFRSF1A-212ENST00000539372 TMEM41BQ5BJD5 291 aa13.85□□□□□ -0.19
TNFRSF1A-212ENST00000539372 GSG1LQ6UXU4 331 aa13.85□□□□□ -0.19
TNFRSF1A-212ENST00000539372 CIB3Q96Q77 187 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1A-212ENST00000539372 TRGV9Q99603 122 aa13.85□□□□□ -0.19
TNFRSF1A-212ENST00000539372 IGKV1OR2-108A0A075B7D4 117 aa13.84□□□□□ -0.19
TNFRSF1A-212ENST00000539372 C9orf170A2RU37 121 aa13.84□□□□□ -0.19
TNFRSF1A-212ENST00000539372 ADAP1O75689 374 aa13.84□□□□□ -0.19
TNFRSF1A-212ENST00000539372 NDUFB6O95139 128 aa13.84□□□□□ -0.19
TNFRSF1A-212ENST00000539372 RBMY1A1P0DJD3 496 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-212ENST00000539372 RBMY1CP0DJD4 496 aa13.84□□□□□ -0.19
TNFRSF1A-212ENST00000539372 NUP62P37198 522 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-212ENST00000539372 UBE2MP61081 183 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-212ENST00000539372 RPP30P78346 268 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-212ENST00000539372 RBMY1FQ15415 496 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-212ENST00000539372 SPANXN5Q5MJ07 72 aa13.84□□□□□ -0.19
TNFRSF1A-212ENST00000539372 PPP1R14BQ96C90 147 aa13.84□□□□□ -0.19
TNFRSF1A-212ENST00000539372 SDHCQ99643 169 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-212ENST00000539372 WDR12Q9GZL7 423 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-212ENST00000539372 PFDN2Q9UHV9 154 aa13.84□□□□□ -0.19
TNFRSF1A-212ENST00000539372 NAP1L6A6NFF2 107 aa13.83□□□□□ -0.2
TNFRSF1A-212ENST00000539372 H3BP45 60 aa13.83□□□□□ -0.2
TNFRSF1A-212ENST00000539372 DEFB1P60022 68 aa13.83□□□□□ -0.2
TNFRSF1A-212ENST00000539372 THAP8Q8NA92 274 aa13.83□□□□□ -0.2
TNFRSF1A-212ENST00000539372 CSNK1G2-AS1Q8NCQ2 148 aa13.83□□□□□ -0.2
TNFRSF1A-212ENST00000539372 LINC00052Q96N35 136 aa13.83□□□□□ -0.2
TNFRSF1A-212ENST00000539372 SEPSECSQ9HD40 501 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-212ENST00000539372 X6R8D5 127 aa13.83□□□□□ -0.2
TNFRSF1A-212ENST00000539372 EPPK1P58107 5090 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-212ENST00000539372 ZNF705EA8MWA4 302 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-212ENST00000539372 PRSS46E5RG02 174 aa13.82□□□□□ -0.2
TNFRSF1A-212ENST00000539372 H3BMM0 161 aa13.82□□□□□ -0.2
TNFRSF1A-212ENST00000539372 MIFP14174 115 aa13.82□□□□□ -0.2
TNFRSF1A-212ENST00000539372 TBC1D24Q9ULP9 559 aa13.82□□□□□ -0.2
TNFRSF1A-212ENST00000539372 ANXA7P20073 488 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1A-212ENST00000539372 POLR2GP62487 172 aaKnown RBP eCLIP13.81□□□□□ -0.2
TNFRSF1A-212ENST00000539372 C1orf194Q5T5A4 169 aa13.81□□□□□ -0.2
TNFRSF1A-212ENST00000539372 GDF5OSQ5U4N7 250 aa13.81□□□□□ -0.2
TNFRSF1A-212ENST00000539372 COQ8AQ8NI60 647 aa13.81□□□□□ -0.2
TNFRSF1A-212ENST00000539372 XCL2Q9UBD3 114 aa13.81□□□□□ -0.2
TNFRSF1A-212ENST00000539372 STRAPQ9Y3F4 350 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1A-212ENST00000539372 ELOA3CA0A087WX78 387 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1A-212ENST00000539372 IGKV3-20P01619 116 aa13.8□□□□□ -0.2
TNFRSF1A-212ENST00000539372 OR4E1P0C645 316 aa13.8□□□□□ -0.2
TNFRSF1A-212ENST00000539372 HLA-DRB4P13762 266 aa13.8□□□□□ -0.2
TNFRSF1A-212ENST00000539372 GATA2P23769 480 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1A-212ENST00000539372 BTCP35070 178 aa13.8□□□□□ -0.2
TNFRSF1A-212ENST00000539372 NKX2-1P43699 371 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms