RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 FCGR2BP31994 310 aaPredicted RBP10.93□□□□□ -0.66
CD4-208ENST00000538827 RPL29P47914 159 aaKnown RBP10.93□□□□□ -0.66
CD4-208ENST00000538827 PROK1P58294 105 aa10.93□□□□□ -0.66
CD4-208ENST00000538827 SELENOTP62341 195 aa10.93□□□□□ -0.66
CD4-208ENST00000538827 ACOT6Q3I5F7 207 aaPredicted RBP10.93□□□□□ -0.66
CD4-208ENST00000538827 ZNF343Q6P1L6 599 aa10.93□□□□□ -0.66
CD4-208ENST00000538827 FAM122CQ6P4D5 195 aa10.93□□□□□ -0.66
CD4-208ENST00000538827 RNF152Q8N8N0 203 aa10.93□□□□□ -0.66
CD4-208ENST00000538827 KLHL30-AS1Q8NEE0 82 aa10.93□□□□□ -0.66
CD4-208ENST00000538827 FAM213BQ8TBF2 198 aa10.93□□□□□ -0.66
CD4-208ENST00000538827 MYOZ3Q8TDC0 251 aa10.93□□□□□ -0.66
CD4-208ENST00000538827 PBDC1Q9BVG4 233 aa10.93□□□□□ -0.66
CD4-208ENST00000538827 VSIRQ9H7M9 311 aa10.93□□□□□ -0.66
CD4-208ENST00000538827 TENM1Q9UKZ4 2725 aa10.93□□□□□ -0.66
CD4-208ENST00000538827 COX7A2P2O60397 106 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 RD3LP0DJH9 198 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 PSG1P11464 419 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 ADMP35318 185 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 PRR20EP86478 221 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 PRR20CP86479 221 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 PRR20DP86480 221 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 PRR20BP86481 221 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 PRR20AP86496 221 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 RELQ04864 619 aaPredicted RBP10.92□□□□□ -0.66
CD4-208ENST00000538827 KIAA0141Q14154 515 aaPredicted RBP10.92□□□□□ -0.66
CD4-208ENST00000538827 TMEM41BQ5BJD5 291 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 GCSAMLQ5JQS6 135 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 TCTEX1D4Q5JR98 221 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 SPSB3Q6PJ21 355 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 Q6ZRG5 221 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 C18orf65Q6ZTR6 163 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 ZNF767PQ75MW2 155 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 OR1B1Q8NGR6 318 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 WIPF2Q8TF74 440 aaPredicted RBP10.92□□□□□ -0.66
CD4-208ENST00000538827 PCNPQ8WW12 178 aaKnown RBP10.92□□□□□ -0.66
CD4-208ENST00000538827 UBE2E2Q96LR5 201 aa10.92□□□□□ -0.66
CD4-208ENST00000538827 PEF1Q9UBV8 284 aaKnown RBP10.92□□□□□ -0.66
CD4-208ENST00000538827 YIF1AO95070 293 aa10.91□□□□□ -0.66
CD4-208ENST00000538827 IL4P05112 153 aa10.91□□□□□ -0.66
CD4-208ENST00000538827 CTSGP08311 255 aa10.91□□□□□ -0.66
CD4-208ENST00000538827 OR5G3P0C626 314 aa10.91□□□□□ -0.66
CD4-208ENST00000538827 SULT1A2P50226 295 aa10.91□□□□□ -0.66
CD4-208ENST00000538827 YPEL3P61236 119 aaPredicted RBP10.91□□□□□ -0.66
CD4-208ENST00000538827 SERF2P84101 59 aa10.91□□□□□ -0.66
CD4-208ENST00000538827 FOXL1Q12952 345 aa10.91□□□□□ -0.66
CD4-208ENST00000538827 FAM209BQ5JX69 171 aa10.91□□□□□ -0.66
CD4-208ENST00000538827 ZNF600Q6ZNG1 722 aa10.91□□□□□ -0.66
CD4-208ENST00000538827 OR51G1Q8NGK1 321 aa10.91□□□□□ -0.66
CD4-208ENST00000538827 Q8WTZ3 238 aa10.91□□□□□ -0.66
CD4-208ENST00000538827 ATP6V0BQ99437 205 aa10.91□□□□□ -0.66
CD4-208ENST00000538827 CITED2Q99967 270 aaPredicted RBP10.91□□□□□ -0.66
CD4-208ENST00000538827 SLC25A22Q9H936 323 aa10.91□□□□□ -0.66
CD4-208ENST00000538827 PLA2G2EQ9NZK7 142 aa10.91□□□□□ -0.66
CD4-208ENST00000538827 PUS1Q9Y606 427 aaKnown RBP eCLIP10.91□□□□□ -0.66
CD4-208ENST00000538827 IGHV4OR15-8A0A075B7B6 117 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 IGHV3OR16-8A0A075B7F1 116 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 A0A087WW49 117 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 A0A1B0GUS0 222 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 ZNF705EA8MWA4 302 aaPredicted RBP10.9□□□□□ -0.66
CD4-208ENST00000538827 UMAD1C9J7I0 102 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 BMPR1BO00238 502 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 MBP02144 154 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 ORM2P19652 201 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 M6PRP20645 277 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 DEFB136Q30KP8 78 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 OR10G4Q8NGN3 311 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 OR10G9Q8NGN4 311 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 OR10G7Q8NGN6 311 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 OR1L4Q8NGR5 311 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 RNF141Q8WVD5 230 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 C4orf3Q8WVX3 66 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 RNF125Q96EQ8 232 aa10.9□□□□□ -0.66
CD4-208ENST00000538827 GGCTO75223 188 aaKnown RBP10.89□□□□□ -0.67
CD4-208ENST00000538827 EIF3GO75821 320 aaKnown RBP eCLIP10.89□□□□□ -0.67
CD4-208ENST00000538827 CDC34P49427 236 aaPredicted RBP10.89□□□□□ -0.67
CD4-208ENST00000538827 RAB14P61106 215 aa10.89□□□□□ -0.67
CD4-208ENST00000538827 RPEL1Q2QD12 228 aa10.89□□□□□ -0.67
CD4-208ENST00000538827 PFDN5Q99471 154 aa10.89□□□□□ -0.67
CD4-208ENST00000538827 C20orf24Q9BUV8 137 aa10.89□□□□□ -0.67
CD4-208ENST00000538827 TSSC4Q9Y5U2 329 aaPredicted RBP10.89□□□□□ -0.67
CD4-208ENST00000538827 A0A1B0GV50 99 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 A0A1W2PPV4 95 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 RGS13O14921 159 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 HYPMO75409 117 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 OR2C1O95371 312 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 CDX1P47902 265 aaPredicted RBP10.88□□□□□ -0.67
CD4-208ENST00000538827 FHITP49789 147 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 RAB5CP51148 216 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 NSUN5P1Q3KNT7 163 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 AWAT1Q58HT5 328 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 C10orf113Q5VZT2 155 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 SPATA31B1PQ5VZV4 182 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 TOMM20LQ6UXN7 152 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 C8orf86Q6ZUL3 223 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 WFDC12Q8WWY7 111 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 DPF1Q92782 380 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 RCC1LQ96I51 464 aaKnown RBP10.88□□□□□ -0.67
CD4-208ENST00000538827 DUX3Q96PT4 197 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 RPRMQ9NS64 109 aa10.88□□□□□ -0.67
CD4-208ENST00000538827 HIGD1AQ9Y241 93 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms