RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 Q8WTZ3 238 aa9.95□□□□□ -0.82
SMARCA4-206ENST00000538456 TP53RKQ96S44 253 aa9.95□□□□□ -0.82
SMARCA4-206ENST00000538456 HLA-DRB4X5D2U9 266 aa9.95□□□□□ -0.82
SMARCA4-206ENST00000538456 LRP1BQ9NZR2 4599 aa9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 SMIM9A6NGZ8 99 aa9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 M0QYG6 137 aa9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 CDK2AP2O75956 126 aa9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 IL4P05112 153 aa9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 IGLC1P0CG04 106 aa9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 IL7P13232 177 aa9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 OR10J1P30954 320 aa9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 MRPS10P82664 201 aaKnown RBP9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 BAK1Q16611 211 aa9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 TMEM88Q6PEY1 159 aa9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 SNX29P2Q8IUI4 249 aa9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 OR1S2Q8NGQ3 325 aa9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 RNASE11Q8TAA1 199 aaKnown RBP9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 GPX8Q8TED1 209 aa9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 ABHD1Q96SE0 405 aa9.94□□□□□ -0.82
SMARCA4-206ENST00000538456 TEX48A0A1B0GUV7 120 aa9.93□□□□□ -0.82
SMARCA4-206ENST00000538456 RPS10-NUDT3A0A1W2PQS6 291 aa9.93□□□□□ -0.82
SMARCA4-206ENST00000538456 GSTZ1O43708 216 aaPredicted RBP9.93□□□□□ -0.82
SMARCA4-206ENST00000538456 PIGPP57054 158 aa9.93□□□□□ -0.82
SMARCA4-206ENST00000538456 RGS21Q2M5E4 152 aa9.93□□□□□ -0.82
SMARCA4-206ENST00000538456 TRIM16LQ309B1 348 aa9.93□□□□□ -0.82
SMARCA4-206ENST00000538456 BSXQ3C1V8 233 aa9.93□□□□□ -0.82
SMARCA4-206ENST00000538456 TRIQKQ629K1 86 aa9.93□□□□□ -0.82
SMARCA4-206ENST00000538456 PRSS54Q6PEW0 395 aa9.93□□□□□ -0.82
SMARCA4-206ENST00000538456 TMED3Q9Y3Q3 217 aa9.93□□□□□ -0.82
SMARCA4-206ENST00000538456 A0A0G2JRQ6 117 aa9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 ATG12O94817 140 aa9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 RCVRNP35243 200 aa9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 NKX2-1P43699 371 aaPredicted RBP9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 DEFA1P59665 94 aa9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 DEFA3P59666 94 aa9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 YPEL3P61236 119 aaPredicted RBP9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 RND3P61587 244 aa9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 SP6Q3SY56 376 aa9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 OR4B1Q8NGF8 309 aa9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 SMIM4Q8WVI0 70 aa9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 TRIM63Q969Q1 353 aa9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 RRNAD1Q96FB5 475 aaKnown RBP9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 LINC00052Q96N35 136 aa9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 SEPSECSQ9HD40 501 aaKnown RBP9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 YTHDF2Q9Y5A9 579 aaKnown RBP9.92□□□□□ -0.82
SMARCA4-206ENST00000538456 C3orf85A0A1B0GTC6 90 aa9.91□□□□□ -0.82
SMARCA4-206ENST00000538456 LOC102723971A0A1B0GUV8 181 aa9.91□□□□□ -0.82
SMARCA4-206ENST00000538456 GABARAPH6UMI1 98 aa9.91□□□□□ -0.82
SMARCA4-206ENST00000538456 BUB3O43684 328 aa9.91□□□□□ -0.82
SMARCA4-206ENST00000538456 HTR2BP41595 481 aa9.91□□□□□ -0.82
SMARCA4-206ENST00000538456 RNASE12Q5GAN4 147 aaKnown RBP9.91□□□□□ -0.82
SMARCA4-206ENST00000538456 GSG1LQ6UXU4 331 aa9.91□□□□□ -0.82
SMARCA4-206ENST00000538456 ZNF709Q8N972 641 aa9.91□□□□□ -0.82
SMARCA4-206ENST00000538456 ACY3Q96HD9 319 aa9.91□□□□□ -0.82
SMARCA4-206ENST00000538456 C7orf50Q9BRJ6 194 aaKnown RBP9.91□□□□□ -0.82
SMARCA4-206ENST00000538456 ATG101Q9BSB4 218 aa9.91□□□□□ -0.82
SMARCA4-206ENST00000538456 SLC35B3Q9H1N7 401 aa9.91□□□□□ -0.82
SMARCA4-206ENST00000538456 SAV1Q9H4B6 383 aaPredicted RBP9.91□□□□□ -0.82
SMARCA4-206ENST00000538456 HEYLQ9NQ87 328 aaPredicted RBP9.91□□□□□ -0.82
SMARCA4-206ENST00000538456 HERC1Q15751 4861 aa9.91□□□□□ -0.82
SMARCA4-206ENST00000538456 PTTG1O95997 202 aa9.9□□□□□ -0.82
SMARCA4-206ENST00000538456 HBE1P02100 147 aa9.9□□□□□ -0.82
SMARCA4-206ENST00000538456 RD3LP0DJH9 198 aa9.9□□□□□ -0.82
SMARCA4-206ENST00000538456 SLC25A4P12235 298 aa9.9□□□□□ -0.82
SMARCA4-206ENST00000538456 DAD1P61803 113 aa9.9□□□□□ -0.82
SMARCA4-206ENST00000538456 ASAH1Q13510 395 aa9.9□□□□□ -0.82
SMARCA4-206ENST00000538456 NPIPB3Q92617 1050 aa9.9□□□□□ -0.82
SMARCA4-206ENST00000538456 ZNF486Q96H40 463 aaPredicted RBP9.9□□□□□ -0.82
SMARCA4-206ENST00000538456 SCPEP1Q9HB40 452 aa9.9□□□□□ -0.82
SMARCA4-206ENST00000538456 GOLT1BQ9Y3E0 138 aa9.9□□□□□ -0.82
SMARCA4-206ENST00000538456 APOBP04114 4563 aaKnown RBP9.89□□□□□ -0.83
SMARCA4-206ENST00000538456 INPP1P49441 399 aa9.89□□□□□ -0.83
SMARCA4-206ENST00000538456 SPCS3P61009 180 aa9.89□□□□□ -0.83
SMARCA4-206ENST00000538456 SSBP1Q04837 148 aaKnown RBP9.89□□□□□ -0.83
SMARCA4-206ENST00000538456 OXA1LQ15070 435 aa9.89□□□□□ -0.83
SMARCA4-206ENST00000538456 FOXI2Q6ZQN5 318 aa9.89□□□□□ -0.83
SMARCA4-206ENST00000538456 SLC24A4Q8NFF2 622 aa9.89□□□□□ -0.83
SMARCA4-206ENST00000538456 OR51G1Q8NGK1 321 aa9.89□□□□□ -0.83
SMARCA4-206ENST00000538456 COQ8AQ8NI60 647 aa9.89□□□□□ -0.83
SMARCA4-206ENST00000538456 PBDC1Q9BVG4 233 aa9.89□□□□□ -0.83
SMARCA4-206ENST00000538456 COPZ2Q9P299 210 aa9.89□□□□□ -0.83
SMARCA4-206ENST00000538456 NBDYA0A0U1RRE5 68 aa9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 F6UB75 175 aa9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 NXPH3O95157 252 aa9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 TOMM40O96008 361 aa9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 PSG1P11464 419 aa9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 FAM3BP58499 235 aaPredicted RBP9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 C2orf83Q53S99 150 aa9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 RNASE10Q5GAN6 216 aaKnown RBP9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 LHFPL1Q86WI0 220 aa9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 C1orf158Q8N1D5 194 aa9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 Q8N1X5 172 aa9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 C6orf223Q8N319 242 aa9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 C15orf53Q8NAA6 179 aa9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 OR52I2Q8NH67 350 aa9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 RNASEH2CQ8TDP1 164 aaKnown RBP9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 TMEM170AQ8WVE7 144 aa9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 SCRT2Q9NQ03 307 aa9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 KLK11Q9UBX7 282 aa9.88□□□□□ -0.83
SMARCA4-206ENST00000538456 CEBPZOSA8MTT3 80 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms