RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 UQCRFS1P47985 274 aa11.11□□□□□ -0.63
LIMK1-208ENST00000538333 DNLZQ5SXM8 178 aa11.11□□□□□ -0.63
LIMK1-208ENST00000538333 VMO1Q7Z5L0 202 aa11.11□□□□□ -0.63
LIMK1-208ENST00000538333 DYNAPQ8N1N2 210 aa11.11□□□□□ -0.63
LIMK1-208ENST00000538333 A0A1W2PRD5 423 aa11.1□□□□□ -0.63
LIMK1-208ENST00000538333 A0A1W2PRF3 423 aa11.1□□□□□ -0.63
LIMK1-208ENST00000538333 A0A1W2PRM7 423 aa11.1□□□□□ -0.63
LIMK1-208ENST00000538333 SNRPCP09234 159 aaKnown RBP11.1□□□□□ -0.63
LIMK1-208ENST00000538333 ADMP35318 185 aa11.1□□□□□ -0.63
LIMK1-208ENST00000538333 IGKV1-17P01599 117 aa11.1□□□□□ -0.63
LIMK1-208ENST00000538333 FRMD6-AS1P0C7T7 363 aa11.1□□□□□ -0.63
LIMK1-208ENST00000538333 HOXB4P17483 251 aaPredicted RBP11.1□□□□□ -0.63
LIMK1-208ENST00000538333 CBLN1P23435 193 aa11.1□□□□□ -0.63
LIMK1-208ENST00000538333 RANP62826 216 aaKnown RBP11.1□□□□□ -0.63
LIMK1-208ENST00000538333 CTAG1AP78358 180 aa11.1□□□□□ -0.63
LIMK1-208ENST00000538333 FXYD3Q14802 87 aa11.1□□□□□ -0.63
LIMK1-208ENST00000538333 C5orf64Q2M2E5 130 aa11.1□□□□□ -0.63
LIMK1-208ENST00000538333 IBA57Q5T440 356 aaKnown RBP11.1□□□□□ -0.63
LIMK1-208ENST00000538333 OR8I2Q8N0Y5 310 aa11.1□□□□□ -0.63
LIMK1-208ENST00000538333 NBEAP1P0C6P0 100 aa11.09□□□□□ -0.63
LIMK1-208ENST00000538333 MGST1P10620 155 aaKnown RBP11.09□□□□□ -0.63
LIMK1-208ENST00000538333 HIST1H1BP16401 226 aaKnown RBP11.09□□□□□ -0.63
LIMK1-208ENST00000538333 Q8N6K4 173 aa11.09□□□□□ -0.63
LIMK1-208ENST00000538333 UBTD1Q9HAC8 227 aa11.09□□□□□ -0.63
LIMK1-208ENST00000538333 CACNA1BQ00975 2339 aa11.09□□□□□ -0.63
LIMK1-208ENST00000538333 TRAV34A0A0B4J273 112 aa11.09□□□□□ -0.63
LIMK1-208ENST00000538333 GNG5P63218 68 aa11.09□□□□□ -0.63
LIMK1-208ENST00000538333 CX3CL1P78423 397 aa11.09□□□□□ -0.63
LIMK1-208ENST00000538333 LEMD1Q68G75 181 aa11.09□□□□□ -0.63
LIMK1-208ENST00000538333 CCDC144NLQ6NUI1 221 aa11.09□□□□□ -0.63
LIMK1-208ENST00000538333 NHLRC2Q8NBF2 726 aa11.09□□□□□ -0.63
LIMK1-208ENST00000538333 BLNKQ8WV28 456 aa11.09□□□□□ -0.63
LIMK1-208ENST00000538333 FAM103A1Q9BTL3 118 aaKnown RBP11.09□□□□□ -0.63
LIMK1-208ENST00000538333 SIRPDQ9H106 197 aa11.09□□□□□ -0.63
LIMK1-208ENST00000538333 PRDM13Q9H4Q3 707 aa11.09□□□□□ -0.63
LIMK1-208ENST00000538333 EPDR1Q9UM22 224 aa11.09□□□□□ -0.63
LIMK1-208ENST00000538333 HIGD1AQ9Y241 93 aa11.09□□□□□ -0.63
LIMK1-208ENST00000538333 WNK2Q9Y3S1 2297 aa11.08□□□□□ -0.63
LIMK1-208ENST00000538333 SMIM27A0A1W2PRY6 76 aa11.08□□□□□ -0.64
LIMK1-208ENST00000538333 OOSP1A8MZH6 123 aa11.08□□□□□ -0.64
LIMK1-208ENST00000538333 C19orf84I3L1E1 186 aa11.08□□□□□ -0.64
LIMK1-208ENST00000538333 EFNA4P52798 201 aa11.08□□□□□ -0.64
LIMK1-208ENST00000538333 HES1Q14469 280 aa11.08□□□□□ -0.64
LIMK1-208ENST00000538333 TMEM183BQ1AE95 376 aa11.08□□□□□ -0.64
LIMK1-208ENST00000538333 MINOS1Q5TGZ0 78 aa11.08□□□□□ -0.64
LIMK1-208ENST00000538333 GBGT1Q8N5D6 347 aa11.08□□□□□ -0.64
LIMK1-208ENST00000538333 OR1L6Q8NGR2 347 aa11.08□□□□□ -0.64
LIMK1-208ENST00000538333 RASL11BQ9BPW5 248 aa11.08□□□□□ -0.64
LIMK1-208ENST00000538333 KLF12Q9Y4X4 402 aa11.08□□□□□ -0.64
LIMK1-208ENST00000538333 MINOS1-NBL1R4GNA1 71 aa11.08□□□□□ -0.64
LIMK1-208ENST00000538333 PGPA6NDG6 321 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 GNLYP22749 145 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 LYZP61626 148 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 EBI3Q14213 229 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 JOSD1Q15040 202 aaPredicted RBP11.07□□□□□ -0.64
LIMK1-208ENST00000538333 ASPHD1Q5U4P2 390 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 FAM231DQ6ZW35 169 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 BAGE2Q86Y30 109 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 SLC25A39Q9BZJ4 359 aaPredicted RBP11.07□□□□□ -0.64
LIMK1-208ENST00000538333 MRPL18Q9H0U6 180 aaKnown RBP11.07□□□□□ -0.64
LIMK1-208ENST00000538333 C7orf69Q9H7B7 122 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 MRPL27Q9P0M9 148 aaKnown RBP11.07□□□□□ -0.64
LIMK1-208ENST00000538333 ZFYVE26Q68DK2 2539 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 A0A1B0GUS0 222 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 SLC25A5P05141 298 aaKnown RBP11.07□□□□□ -0.64
LIMK1-208ENST00000538333 IER3P46695 156 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 ZNF562Q6V9R5 426 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 ZNF600Q6ZNG1 722 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 MBD6Q96DN6 1003 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 GNB1LQ9BYB4 327 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 CSMD1Q96PZ7 3565 aa11.07□□□□□ -0.64
LIMK1-208ENST00000538333 TRBV9A0A0B4J1U6 114 aa11.06□□□□□ -0.64
LIMK1-208ENST00000538333 NDPQ00604 133 aa11.06□□□□□ -0.64
LIMK1-208ENST00000538333 TMEM256Q8N2U0 113 aa11.06□□□□□ -0.64
LIMK1-208ENST00000538333 FAM168AQ92567 244 aa11.06□□□□□ -0.64
LIMK1-208ENST00000538333 FANCD2OSQ96PS1 177 aa11.06□□□□□ -0.64
LIMK1-208ENST00000538333 TMEM14CQ9P0S9 112 aa11.06□□□□□ -0.64
LIMK1-208ENST00000538333 IGHV2-70DA0A0C4DH43 119 aa11.06□□□□□ -0.64
LIMK1-208ENST00000538333 NPIPB5A8MRT5 1133 aa11.06□□□□□ -0.64
LIMK1-208ENST00000538333 SNURFLB1AK76 121 aa11.06□□□□□ -0.64
LIMK1-208ENST00000538333 RD3LP0DJH9 198 aa11.06□□□□□ -0.64
LIMK1-208ENST00000538333 C5orf17Q8NAS9 161 aa11.06□□□□□ -0.64
LIMK1-208ENST00000538333 OR5R1Q8NH85 324 aa11.06□□□□□ -0.64
LIMK1-208ENST00000538333 TMEM18Q96B42 140 aa11.06□□□□□ -0.64
LIMK1-208ENST00000538333 RBM14Q96PK6 669 aaKnown RBP11.06□□□□□ -0.64
LIMK1-208ENST00000538333 Q9H3A6 140 aa11.06□□□□□ -0.64
LIMK1-208ENST00000538333 TP53TG3Q9ULZ0 132 aa11.06□□□□□ -0.64
LIMK1-208ENST00000538333 MED13LQ71F56 2210 aa11.05□□□□□ -0.64
LIMK1-208ENST00000538333 IGLV11-55A0A075B6I3 123 aa11.05□□□□□ -0.64
LIMK1-208ENST00000538333 ZNF705GA8MUZ8 300 aaPredicted RBP11.05□□□□□ -0.64
LIMK1-208ENST00000538333 NUPR1O60356 82 aa11.05□□□□□ -0.64
LIMK1-208ENST00000538333 GZMBP10144 247 aa11.05□□□□□ -0.64
LIMK1-208ENST00000538333 TCL1AP56279 114 aa11.05□□□□□ -0.64
LIMK1-208ENST00000538333 KLF17Q5JT82 389 aaPredicted RBP11.05□□□□□ -0.64
LIMK1-208ENST00000538333 SMIM12Q96EX1 92 aa11.05□□□□□ -0.64
LIMK1-208ENST00000538333 AJUBAQ96IF1 538 aa11.05□□□□□ -0.64
LIMK1-208ENST00000538333 ATG101Q9BSB4 218 aa11.05□□□□□ -0.64
LIMK1-208ENST00000538333 GRIFINA4D1Z8 144 aa11.04□□□□□ -0.64
LIMK1-208ENST00000538333 H3BTX0 84 aa11.04□□□□□ -0.64
LIMK1-208ENST00000538333 CA1P00915 261 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms