RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 STAG3L2P0CL84 134 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 USF1P22415 310 aaPredicted RBP8.62□□□□□ -1.03
CLIP1-210ENST00000538120 YPEL3P61236 119 aaPredicted RBP8.62□□□□□ -1.03
CLIP1-210ENST00000538120 SCGB2A2Q13296 93 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 C2orf83Q53S99 150 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 TPTE2P1Q5T6R2 138 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 NHLRC2Q8NBF2 726 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 OR4P4Q8NGL7 312 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 OR10G8Q8NGN5 311 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 ZNF430Q9H8G1 570 aaPredicted RBP8.62□□□□□ -1.03
CLIP1-210ENST00000538120 PAM16Q9Y3D7 125 aa8.62□□□□□ -1.03
CLIP1-210ENST00000538120 LY6LH3BQJ8 138 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 NDUFS7O75251 213 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 SAP30O75446 220 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 COX7A1P24310 79 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 ZNF90Q03938 601 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 MLANAQ16655 118 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 C10orf55Q5SWW7 151 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 LDLRAD2Q5SZI1 272 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 MOB3BQ86TA1 216 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 OR1L8Q8NGR8 309 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 TIMD4Q96H15 378 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 HSPB9Q9BQS6 159 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 HIF1ANQ9NWT6 349 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 IGHV1-3A0A0C4DH29 117 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 FNDC10F2Z333 226 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 CRYGBP07316 175 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 IGFBP2P18065 325 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 OR5I1Q13606 314 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 VSTM2AQ8TAG5 236 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 VN1R17PQ8TDU5 208 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 COMMD5Q9GZQ3 224 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 MRPL18Q9H0U6 180 aaKnown RBP8.61□□□□□ -1.03
CLIP1-210ENST00000538120 ONECUT1Q9UBC0 465 aa8.61□□□□□ -1.03
CLIP1-210ENST00000538120 ENSAO43768 121 aaKnown RBP8.6□□□□□ -1.03
CLIP1-210ENST00000538120 SPINK4O60575 86 aa8.6□□□□□ -1.03
CLIP1-210ENST00000538120 CNTFRP26992 372 aa8.6□□□□□ -1.03
CLIP1-210ENST00000538120 IER3P46695 156 aa8.6□□□□□ -1.03
CLIP1-210ENST00000538120 ATP5IP56385 69 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-210ENST00000538120 WT1-ASQ06250 92 aa8.6□□□□□ -1.03
CLIP1-210ENST00000538120 TEPPQ6URK8 271 aa8.6□□□□□ -1.03
CLIP1-210ENST00000538120 PNKDQ8N490 385 aa8.6□□□□□ -1.03
CLIP1-210ENST00000538120 DAZAP1Q96EP5 407 aaKnown RBP8.6□□□□□ -1.03
CLIP1-210ENST00000538120 TMEM208Q9BTX3 173 aa8.6□□□□□ -1.03
CLIP1-210ENST00000538120 TNCP24821 2201 aa8.6□□□□□ -1.03
CLIP1-210ENST00000538120 NPSP0C0P6 89 aa8.6□□□□□ -1.03
CLIP1-210ENST00000538120 CRISP2P16562 243 aa8.6□□□□□ -1.03
CLIP1-210ENST00000538120 LGALS7P47929 136 aa8.6□□□□□ -1.03
CLIP1-210ENST00000538120 SELENOTP62341 195 aa8.6□□□□□ -1.03
CLIP1-210ENST00000538120 TMEM249Q2WGJ8 235 aa8.6□□□□□ -1.03
CLIP1-210ENST00000538120 UBTD1Q9HAC8 227 aa8.6□□□□□ -1.03
CLIP1-210ENST00000538120 TPRP12270 2363 aaKnown RBP8.6□□□□□ -1.03
CLIP1-210ENST00000538120 IGKV1OR2-108A0A075B7D4 117 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 CXorf1O96002 111 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 LINC00869P0C866 280 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 COMPP49747 757 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-210ENST00000538120 ARF6P62330 175 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 BATFQ16520 125 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 VMA21Q3ZAQ7 101 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 CT83Q5H943 113 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 HCP5Q6MZN7 132 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 TEX43Q6ZNM6 134 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 OR1L6Q8NGR2 347 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 FAM103A1Q9BTL3 118 aaKnown RBP8.59□□□□□ -1.03
CLIP1-210ENST00000538120 IL36BQ9NZH7 164 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 INSIG2Q9Y5U4 225 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 LOC105371242A0A075B767 164 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 HELTA6NFD8 242 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 FCN1O00602 326 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 TPPP2P59282 170 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 SLC35B1P78383 322 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 PSG5Q15238 335 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 STPG3Q8N7X2 389 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 TEX45Q8NA69 505 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 SSBP3Q9BWW4 388 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-210ENST00000538120 SLC45A2Q9UMX9 530 aa8.59□□□□□ -1.03
CLIP1-210ENST00000538120 A0A1W2PPI3 338 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 SNURFLB1AK76 121 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 DLEU1O43261 78 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 GCHFRP30047 84 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 ERHP84090 104 aaKnown RBP8.58□□□□□ -1.04
CLIP1-210ENST00000538120 CD69Q07108 199 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 KIAA1644Q3SXP7 199 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 ASPHD1Q5U4P2 390 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 BAGE3Q86Y29 109 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 BAGE2Q86Y30 109 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 OR11H6Q8NGC7 330 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 FAM229AH3BQW9 127 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 PPBPP02775 128 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 ZFP36P26651 326 aaKnown RBP8.58□□□□□ -1.04
CLIP1-210ENST00000538120 GPR6P46095 362 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-210ENST00000538120 LGALS4P56470 323 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 OR8I2Q8N0Y5 310 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 OR5AU1Q8NGC0 362 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 BTF3L4Q96K17 158 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 MIEN1Q9BRT3 115 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 FBXL7Q9UJT9 491 aa8.58□□□□□ -1.04
CLIP1-210ENST00000538120 M0R1W7 72 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 BRS3P32247 399 aa8.57□□□□□ -1.04
CLIP1-210ENST00000538120 TFPI2P48307 235 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms