RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 ZNF137PP52743 207 aa6.98□□□□□ -1.29
UBE3B-208ENST00000538070 KLRB1Q12918 225 aa6.98□□□□□ -1.29
UBE3B-208ENST00000538070 C11orf42Q8N5U0 333 aa6.98□□□□□ -1.29
UBE3B-208ENST00000538070 OR1L4Q8NGR5 311 aa6.98□□□□□ -1.29
UBE3B-208ENST00000538070 CMTM2Q8TAZ6 248 aa6.98□□□□□ -1.29
UBE3B-208ENST00000538070 ST6GALNAC6Q969X2 333 aa6.98□□□□□ -1.29
UBE3B-208ENST00000538070 NCOR1P1Q9H4R4 102 aa6.98□□□□□ -1.29
UBE3B-208ENST00000538070 IL36BQ9NZH7 164 aa6.98□□□□□ -1.29
UBE3B-208ENST00000538070 MSRB2Q9Y3D2 182 aa6.98□□□□□ -1.29
UBE3B-208ENST00000538070 IGHV3OR16-13A0A075B7E8 117 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 IGHV3-74A0A0B4J1X5 117 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 HTR1DP28221 377 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 LGALS7P47929 136 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 ADORA2A-AS1P86434 159 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 TOMM20LQ6UXN7 152 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 EXOC3-AS1Q8N2X6 119 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 BTF3L4Q96K17 158 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 USP9XQ93008 2570 aaPredicted RBP6.97□□□□□ -1.29
UBE3B-208ENST00000538070 PTPN13Q12923 2485 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 LOC105371242A0A075B767 164 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 GATCO43716 136 aaKnown RBP6.97□□□□□ -1.29
UBE3B-208ENST00000538070 SERF1AO75920 110 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 LIPFP07098 398 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 BATFQ16520 125 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 C16orf54Q6UWD8 224 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 RASL11BQ9BPW5 248 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 ZNF331Q9NQX6 463 aaPredicted RBP6.97□□□□□ -1.29
UBE3B-208ENST00000538070 ABCA12Q86UK0 2595 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 IGLC7A0M8Q6 106 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 IGHV2-70P01814 119 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 NBEAP1P0C6P0 100 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 GZMBP10144 247 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 PSG1P11464 419 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 UQCRFS1P47985 274 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 LDLRAD2Q5SZI1 272 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 FAM19A2Q8N3H0 131 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 OR2D3Q8NGH3 330 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 CACNG8Q8WXS5 425 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 TMEM68Q96MH6 324 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 HSPB9Q9BQS6 159 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 ITPR1Q14643 2758 aa6.97□□□□□ -1.29
UBE3B-208ENST00000538070 MUC21A0A0G2JKD1 596 aa6.96□□□□□ -1.29
UBE3B-208ENST00000538070 MUC21A0A140T8X8 626 aa6.96□□□□□ -1.29
UBE3B-208ENST00000538070 ZNF253O75346 499 aa6.96□□□□□ -1.29
UBE3B-208ENST00000538070 DLX6P56179 175 aa6.96□□□□□ -1.29
UBE3B-208ENST00000538070 IQCJQ1A5X6 159 aa6.96□□□□□ -1.29
UBE3B-208ENST00000538070 MUC21Q5SSG8 566 aa6.96□□□□□ -1.29
UBE3B-208ENST00000538070 TCF24Q7RTU0 167 aa6.96□□□□□ -1.29
UBE3B-208ENST00000538070 PYGO2Q9BRQ0 406 aa6.96□□□□□ -1.29
UBE3B-208ENST00000538070 LINC00574Q9H8X3 128 aa6.96□□□□□ -1.29
UBE3B-208ENST00000538070 TMSB15BA0A087X1C1 80 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 PEX7O00628 323 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 NDUFS6O75380 124 aaKnown RBP6.96□□□□□ -1.3
UBE3B-208ENST00000538070 SRIP30626 198 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 GPX4P36969 197 aaPredicted RBP6.96□□□□□ -1.3
UBE3B-208ENST00000538070 Q56UQ5 140 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 PRNTQ86SH4 94 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 ZNF596Q8TC21 504 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 PERPQ96FX8 193 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 FAM167A-AS1Q96KT0 104 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 DMRT1Q9Y5R6 373 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 SELENOKQ9Y6D0 94 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 IGKV1D-37A0A075B6S9 117 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 H0Y8G0 127 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 FCGR2BP31994 310 aaPredicted RBP6.96□□□□□ -1.3
UBE3B-208ENST00000538070 TMEM30BQ3MIR4 351 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 GOLT1AQ6ZVE7 132 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 VN1R17PQ8TDU5 208 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 DAZAP1Q96EP5 407 aaKnown RBP6.96□□□□□ -1.3
UBE3B-208ENST00000538070 TXNDC17Q9BRA2 123 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 PRDM13Q9H4Q3 707 aa6.96□□□□□ -1.3
UBE3B-208ENST00000538070 IGHV3-49A0A0A0MS15 119 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 TMEM11P17152 192 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 FBLN7Q53RD9 439 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 IGFL4Q6B9Z1 124 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 RNASEH2CQ8TDP1 164 aaKnown RBP6.95□□□□□ -1.3
UBE3B-208ENST00000538070 C17orf77Q96MU5 243 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 DPM3Q9P2X0 92 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 PAM16Q9Y3D7 125 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 V9GYV3 84 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 CFAP46Q8IYW2 2715 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 EPG5Q9HCE0 2579 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 IGHV3-66A0A0C4DH42 116 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 IL4P05112 153 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 AMTP48728 403 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 COMPP49747 757 aaPredicted RBP6.95□□□□□ -1.3
UBE3B-208ENST00000538070 FOXA3P55318 350 aaPredicted RBP6.95□□□□□ -1.3
UBE3B-208ENST00000538070 RPL15P61313 204 aaKnown RBP6.95□□□□□ -1.3
UBE3B-208ENST00000538070 FOXL1Q12952 345 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 ECSCRQ19T08 205 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 ETFRF1Q6IPR1 90 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 ZNF841Q6ZN19 808 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 Q71RC1 249 aaPredicted RBP6.95□□□□□ -1.3
UBE3B-208ENST00000538070 ATOH7Q8N100 152 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 TBX15Q96SF7 602 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 GNB4Q9HAV0 340 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 LINC00527Q9UJ94 153 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 HIGD1AQ9Y241 93 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 CCDC168Q8NDH2 2452 aa6.95□□□□□ -1.3
UBE3B-208ENST00000538070 GNG7O60262 68 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms