RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 LY96Q9Y6Y9 160 aa12.93□□□□□ -0.34
MCF2L-232ENST00000535094 VMA21Q3ZAQ7 101 aa12.93□□□□□ -0.34
MCF2L-232ENST00000535094 AMMECR1LQ6DCA0 310 aa12.93□□□□□ -0.34
MCF2L-232ENST00000535094 FAM90A9PA6NNJ1 464 aa12.92□□□□□ -0.34
MCF2L-232ENST00000535094 NDUFB8O95169 186 aa12.92□□□□□ -0.34
MCF2L-232ENST00000535094 DIAPH2-AS1Q14236 149 aa12.92□□□□□ -0.34
MCF2L-232ENST00000535094 TMEM249Q2WGJ8 235 aa12.92□□□□□ -0.34
MCF2L-232ENST00000535094 RPRMLQ8N4K4 120 aa12.92□□□□□ -0.34
MCF2L-232ENST00000535094 GAL3ST2Q9H3Q3 398 aa12.92□□□□□ -0.34
MCF2L-232ENST00000535094 MGAQ8IWI9 3026 aa12.92□□□□□ -0.34
MCF2L-232ENST00000535094 PPIAL4DF5H284 164 aa12.92□□□□□ -0.34
MCF2L-232ENST00000535094 TMPRSS3P57727 454 aa12.92□□□□□ -0.34
MCF2L-232ENST00000535094 TRIP6Q15654 476 aaKnown RBP12.92□□□□□ -0.34
MCF2L-232ENST00000535094 CIARTQ8N365 385 aaPredicted RBP12.92□□□□□ -0.34
MCF2L-232ENST00000535094 EPDR1Q9UM22 224 aa12.92□□□□□ -0.34
MCF2L-232ENST00000535094 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.91□□□□□ -0.34
MCF2L-232ENST00000535094 OR2T8A6NH00 312 aa12.91□□□□□ -0.34
MCF2L-232ENST00000535094 ZADH2Q8N4Q0 377 aa12.91□□□□□ -0.34
MCF2L-232ENST00000535094 PPP1R14DQ9NXH3 145 aa12.91□□□□□ -0.34
MCF2L-232ENST00000535094 NOTCH3Q9UM47 2321 aa12.91□□□□□ -0.34
MCF2L-232ENST00000535094 PRSS46E5RG02 174 aa12.91□□□□□ -0.34
MCF2L-232ENST00000535094 PSG1P11464 419 aa12.91□□□□□ -0.34
MCF2L-232ENST00000535094 TM4SF20Q53R12 229 aa12.91□□□□□ -0.34
MCF2L-232ENST00000535094 SLC25A2Q9BXI2 301 aa12.91□□□□□ -0.34
MCF2L-232ENST00000535094 CHODLQ9H9P2 273 aa12.91□□□□□ -0.34
MCF2L-232ENST00000535094 SMIM27A0A1W2PRY6 76 aa12.91□□□□□ -0.34
MCF2L-232ENST00000535094 E7EUB6 86 aa12.91□□□□□ -0.34
MCF2L-232ENST00000535094 F2RL2O00254 374 aa12.91□□□□□ -0.34
MCF2L-232ENST00000535094 MRPL32Q9BYC8 188 aaKnown RBP12.91□□□□□ -0.34
MCF2L-232ENST00000535094 RPP21Q9H633 154 aaKnown RBP12.91□□□□□ -0.34
MCF2L-232ENST00000535094 DSCAMO60469 2012 aa12.9□□□□□ -0.34
MCF2L-232ENST00000535094 FBLL1A6NHQ2 334 aaKnown RBP12.9□□□□□ -0.34
MCF2L-232ENST00000535094 NDUFB3O43676 98 aa12.9□□□□□ -0.34
MCF2L-232ENST00000535094 EXOC3-AS1Q8N2X6 119 aa12.9□□□□□ -0.34
MCF2L-232ENST00000535094 ZNF714Q96N38 554 aa12.9□□□□□ -0.34
MCF2L-232ENST00000535094 GPR82Q96P67 336 aa12.9□□□□□ -0.34
MCF2L-232ENST00000535094 ADAMTS20P59510 1910 aa12.9□□□□□ -0.34
MCF2L-232ENST00000535094 GDF5OSQ5U4N7 250 aa12.9□□□□□ -0.34
MCF2L-232ENST00000535094 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.9□□□□□ -0.348e-7■■■□□ 15.1
MCF2L-232ENST00000535094 ORAOV1Q8WV07 137 aa12.9□□□□□ -0.35
MCF2L-232ENST00000535094 C19orf24Q9BVV8 132 aa12.9□□□□□ -0.35
MCF2L-232ENST00000535094 HILPDAQ9Y5L2 63 aa12.9□□□□□ -0.35
MCF2L-232ENST00000535094 SPG11Q96JI7 2443 aa12.89□□□□□ -0.35
MCF2L-232ENST00000535094 ZNF329Q86UD4 541 aa12.89□□□□□ -0.35
MCF2L-232ENST00000535094 BPIFA4PQ86YQ2 179 aa12.89□□□□□ -0.35
MCF2L-232ENST00000535094 FNDC4Q9H6D8 234 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-232ENST00000535094 TLN1Q9Y490 2541 aaKnown RBP12.89□□□□□ -0.35
MCF2L-232ENST00000535094 HES1Q14469 280 aa12.89□□□□□ -0.35
MCF2L-232ENST00000535094 C2orf83Q53S99 150 aa12.89□□□□□ -0.35
MCF2L-232ENST00000535094 OR4C13Q8NGP0 309 aa12.89□□□□□ -0.35
MCF2L-232ENST00000535094 VSTM2AQ8TAG5 236 aa12.89□□□□□ -0.35
MCF2L-232ENST00000535094 CT45A10P0DMU9 189 aa12.89□□□□□ -0.35
MCF2L-232ENST00000535094 ESDP10768 282 aa12.89□□□□□ -0.35
MCF2L-232ENST00000535094 ARF6P62330 175 aa12.89□□□□□ -0.35
MCF2L-232ENST00000535094 FAM162BQ5T6X4 162 aa12.89□□□□□ -0.35
MCF2L-232ENST00000535094 ZNF71Q9NQZ8 489 aaPredicted RBP12.89□□□□□ -0.35
MCF2L-232ENST00000535094 TPSG1Q9NRR2 321 aa12.89□□□□□ -0.35
MCF2L-232ENST00000535094 RPUSD1Q9UJJ7 312 aaKnown RBP12.89□□□□□ -0.35
MCF2L-232ENST00000535094 DCHS1Q96JQ0 3298 aa12.88□□□□□ -0.35
MCF2L-232ENST00000535094 IGLV2-8P01709 118 aa12.88□□□□□ -0.35
MCF2L-232ENST00000535094 APOHP02749 345 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-232ENST00000535094 GLRXP35754 106 aa12.88□□□□□ -0.35
MCF2L-232ENST00000535094 Q9H3A6 140 aa12.88□□□□□ -0.35
MCF2L-232ENST00000535094 F11RQ9Y624 299 aaKnown RBP12.88□□□□□ -0.35
MCF2L-232ENST00000535094 CEP295Q9C0D2 2601 aa12.88□□□□□ -0.35
MCF2L-232ENST00000535094 WT1-ASQ06250 92 aa12.88□□□□□ -0.35
MCF2L-232ENST00000535094 ZNF257Q9Y2Q1 563 aa12.88□□□□□ -0.35
MCF2L-232ENST00000535094 TNFRSF1AP19438 455 aa12.88□□□□□ -0.35
MCF2L-232ENST00000535094 NMUP48645 174 aa12.88□□□□□ -0.35
MCF2L-232ENST00000535094 TMUB1Q9BVT8 246 aa12.88□□□□□ -0.35
MCF2L-232ENST00000535094 TCRBV4S1A1TA0A5B7 111 aa12.87□□□□□ -0.35
MCF2L-232ENST00000535094 LRRC10Q5BKY1 277 aa12.87□□□□□ -0.35
MCF2L-232ENST00000535094 Q8N976 141 aa12.87□□□□□ -0.35
MCF2L-232ENST00000535094 MRPL36Q9P0J6 103 aaKnown RBP12.87□□□□□ -0.35
MCF2L-232ENST00000535094 IGHV3OR16-8A0A075B7F1 116 aa12.87□□□□□ -0.35
MCF2L-232ENST00000535094 IGHV3-35A0A0C4DH35 117 aa12.87□□□□□ -0.35
MCF2L-232ENST00000535094 SYS1-DBNDD2H3BUS1 97 aa12.87□□□□□ -0.35
MCF2L-232ENST00000535094 IGHV1-46P01743 117 aa12.87□□□□□ -0.35
MCF2L-232ENST00000535094 RPL27AP46776 148 aaKnown RBP12.87□□□□□ -0.35
MCF2L-232ENST00000535094 DDB2Q92466 427 aa12.87□□□□□ -0.35
MCF2L-232ENST00000535094 AP5S1Q9NUS5 200 aa12.87□□□□□ -0.35
MCF2L-232ENST00000535094 HLA-DRB1P01911 266 aa12.86□□□□□ -0.35
MCF2L-232ENST00000535094 CTRLP40313 264 aa12.86□□□□□ -0.35
MCF2L-232ENST00000535094 MRPL52Q86TS9 123 aaKnown RBP12.86□□□□□ -0.35
MCF2L-232ENST00000535094 CACNG8Q8WXS5 425 aa12.86□□□□□ -0.35
MCF2L-232ENST00000535094 MRPL27Q9P0M9 148 aaKnown RBP12.86□□□□□ -0.35
MCF2L-232ENST00000535094 IGHV1-69-2A0A0G2JMI3 117 aa12.86□□□□□ -0.35
MCF2L-232ENST00000535094 VSTM5A8MXK1 200 aa12.86□□□□□ -0.35
MCF2L-232ENST00000535094 CRYABP02511 175 aaKnown RBP12.86□□□□□ -0.35
MCF2L-232ENST00000535094 MBNL2Q5VZF2 373 aaKnown RBP12.86□□□□□ -0.35
MCF2L-232ENST00000535094 C12orf54Q6X4T0 127 aa12.86□□□□□ -0.35
MCF2L-232ENST00000535094 OSR1Q8TAX0 266 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-232ENST00000535094 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-232ENST00000535094 HSPB8Q9UJY1 196 aa12.86□□□□□ -0.35
MCF2L-232ENST00000535094 MRPS16Q9Y3D3 137 aaKnown RBP12.86□□□□□ -0.35
MCF2L-232ENST00000535094 GAGE10A6NGK3 116 aa12.85□□□□□ -0.35
MCF2L-232ENST00000535094 HIGD1AQ9Y241 93 aa12.85□□□□□ -0.35
MCF2L-232ENST00000535094 SLC25A15Q9Y619 301 aa12.85□□□□□ -0.35
MCF2L-232ENST00000535094 OTOGLQ3ZCN5 2332 aa12.85□□□□□ -0.35
MCF2L-232ENST00000535094 STXBP6Q8NFX7 210 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms