RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 PBDC1Q9BVG4 233 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 MAGT1Q9H0U3 335 aa7.67□□□□□ -1.18
CAPN1-225ENST00000533704 MED6O75586 246 aa7.66□□□□□ -1.18
CAPN1-225ENST00000533704 TOMM40O96008 361 aa7.66□□□□□ -1.18
CAPN1-225ENST00000533704 PSG1P11464 419 aa7.66□□□□□ -1.18
CAPN1-225ENST00000533704 S100A1P23297 94 aa7.66□□□□□ -1.18
CAPN1-225ENST00000533704 OR2F1Q13607 317 aa7.66□□□□□ -1.18
CAPN1-225ENST00000533704 PSMG4Q5JS54 123 aa7.66□□□□□ -1.18
CAPN1-225ENST00000533704 ACTL10Q5JWF8 245 aa7.66□□□□□ -1.18
CAPN1-225ENST00000533704 C16orf54Q6UWD8 224 aa7.66□□□□□ -1.18
CAPN1-225ENST00000533704 GLMPQ8WWB7 406 aa7.66□□□□□ -1.18
CAPN1-225ENST00000533704 SRRQ9GZT4 340 aa7.66□□□□□ -1.18
CAPN1-225ENST00000533704 U3KQE9 123 aa7.66□□□□□ -1.18
CAPN1-225ENST00000533704 NUPR2A6NF83 97 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 WRBO00258 174 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 DEFB4AO15263 64 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 PITX3O75364 302 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 GPX4P36969 197 aaPredicted RBP7.65□□□□□ -1.18
CAPN1-225ENST00000533704 LYZP61626 148 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 RAB11AP62491 216 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 GAMTQ14353 236 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 BAK1Q16611 211 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 NDUFA5Q16718 116 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 GGNBP1Q5YKI7 109 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 DCANP1Q8TF63 244 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 GATAD1Q8WUU5 269 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 RNF125Q96EQ8 232 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 FBXL17Q9UF56 701 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 FLVCR2Q9UPI3 526 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 TMED3Q9Y3Q3 217 aa7.65□□□□□ -1.18
CAPN1-225ENST00000533704 SACSQ9NZJ4 4579 aa7.64□□□□□ -1.19
CAPN1-225ENST00000533704 H3BP45 60 aa7.64□□□□□ -1.19
CAPN1-225ENST00000533704 AP2S1P53680 142 aaPredicted RBP7.64□□□□□ -1.19
CAPN1-225ENST00000533704 ATP5IP56385 69 aaPredicted RBP7.64□□□□□ -1.19
CAPN1-225ENST00000533704 ZNF90Q03938 601 aa7.64□□□□□ -1.19
CAPN1-225ENST00000533704 RGS21Q2M5E4 152 aa7.64□□□□□ -1.19
CAPN1-225ENST00000533704 SPANXN5Q5MJ07 72 aa7.64□□□□□ -1.19
CAPN1-225ENST00000533704 SIGLEC15Q6ZMC9 328 aa7.64□□□□□ -1.19
CAPN1-225ENST00000533704 LRTM2Q8N967 370 aa7.64□□□□□ -1.19
CAPN1-225ENST00000533704 DEDD2Q8WXF8 326 aa7.64□□□□□ -1.19
CAPN1-225ENST00000533704 CIB3Q96Q77 187 aaPredicted RBP7.64□□□□□ -1.19
CAPN1-225ENST00000533704 IGKV1D-37A0A075B6S9 117 aa7.63□□□□□ -1.19
CAPN1-225ENST00000533704 C9orf170A2RU37 121 aa7.63□□□□□ -1.19
CAPN1-225ENST00000533704 NAP1L6A6NFF2 107 aa7.63□□□□□ -1.19
CAPN1-225ENST00000533704 CENPXA8MT69 81 aa7.63□□□□□ -1.19
CAPN1-225ENST00000533704 FAM90A26D6RGX4 464 aa7.63□□□□□ -1.19
CAPN1-225ENST00000533704 BUB3O43684 328 aa7.63□□□□□ -1.19
CAPN1-225ENST00000533704 SYNGR2O43760 224 aa7.63□□□□□ -1.19
CAPN1-225ENST00000533704 ADAP1O75689 374 aa7.63□□□□□ -1.19
CAPN1-225ENST00000533704 LY6G6CO95867 125 aa7.63□□□□□ -1.19
CAPN1-225ENST00000533704 FABP1P07148 127 aa7.63□□□□□ -1.19
CAPN1-225ENST00000533704 SLC25A6P12236 298 aa7.63□□□□□ -1.19
CAPN1-225ENST00000533704 NANOS2P60321 138 aaKnown RBP7.63□□□□□ -1.19
CAPN1-225ENST00000533704 UBE2MP61081 183 aaKnown RBP7.63□□□□□ -1.19
CAPN1-225ENST00000533704 SNRPD3P62318 126 aaKnown RBP7.63□□□□□ -1.19
CAPN1-225ENST00000533704 RPP30P78346 268 aaKnown RBP7.63□□□□□ -1.19
CAPN1-225ENST00000533704 CEMP1Q6PRD7 247 aaPredicted RBP7.63□□□□□ -1.19
CAPN1-225ENST00000533704 TRPT1Q86TN4 253 aaKnown RBP7.63□□□□□ -1.19
CAPN1-225ENST00000533704 NRN1Q9NPD7 142 aa7.63□□□□□ -1.19
CAPN1-225ENST00000533704 CLEC5AQ9NY25 188 aa7.63□□□□□ -1.19
CAPN1-225ENST00000533704 PFDN2Q9UHV9 154 aa7.63□□□□□ -1.19
CAPN1-225ENST00000533704 KLK5Q9Y337 293 aaPredicted RBP7.63□□□□□ -1.19
CAPN1-225ENST00000533704 SNRPGP15A8MWD9 76 aa7.62□□□□□ -1.19
CAPN1-225ENST00000533704 NDUFB6O95139 128 aa7.62□□□□□ -1.19
CAPN1-225ENST00000533704 IFNA21P01568 189 aa7.62□□□□□ -1.19
CAPN1-225ENST00000533704 SPP1P10451 314 aa7.62□□□□□ -1.19
CAPN1-225ENST00000533704 ANXA7P20073 488 aaKnown RBP7.62□□□□□ -1.19
CAPN1-225ENST00000533704 C4BPBP20851 252 aa7.62□□□□□ -1.19
CAPN1-225ENST00000533704 NUP62P37198 522 aaPredicted RBP7.62□□□□□ -1.19
CAPN1-225ENST00000533704 AKR1C1Q04828 323 aa7.62□□□□□ -1.19
CAPN1-225ENST00000533704 C4orf46Q504U0 113 aa7.62□□□□□ -1.19
CAPN1-225ENST00000533704 OR8G2PQ6IF36 304 aa7.62□□□□□ -1.19
CAPN1-225ENST00000533704 MORN3Q6PF18 240 aaPredicted RBP7.62□□□□□ -1.19
CAPN1-225ENST00000533704 GSG1LQ6UXU4 331 aa7.62□□□□□ -1.19
CAPN1-225ENST00000533704 COQ8AQ8NI60 647 aa7.62□□□□□ -1.19
CAPN1-225ENST00000533704 C11orf45Q8TAV5 145 aa7.62□□□□□ -1.19
CAPN1-225ENST00000533704 PHLDA1Q8WV24 401 aaPredicted RBP7.62□□□□□ -1.19
CAPN1-225ENST00000533704 LINC00052Q96N35 136 aa7.62□□□□□ -1.19
CAPN1-225ENST00000533704 RAB40CQ96S21 281 aa7.62□□□□□ -1.19
CAPN1-225ENST00000533704 LYSTQ99698 3801 aa7.62□□□□□ -1.19
CAPN1-225ENST00000533704 WDR12Q9GZL7 423 aaKnown RBP7.62□□□□□ -1.19
CAPN1-225ENST00000533704 STRAPQ9Y3F4 350 aaKnown RBP7.62□□□□□ -1.19
CAPN1-225ENST00000533704 ALMS1Q8TCU4 4167 aa7.62□□□□□ -1.19
CAPN1-225ENST00000533704 RYR2Q92736 4967 aa7.61□□□□□ -1.19
CAPN1-225ENST00000533704 SMCO3A2RU48 225 aa7.61□□□□□ -1.19
CAPN1-225ENST00000533704 SCGB1D2O95969 90 aa7.61□□□□□ -1.19
CAPN1-225ENST00000533704 IGKV3-20P01619 116 aa7.61□□□□□ -1.19
CAPN1-225ENST00000533704 OR4E1P0C645 316 aa7.61□□□□□ -1.19
CAPN1-225ENST00000533704 ATF4P18848 351 aaPredicted RBP7.61□□□□□ -1.19
CAPN1-225ENST00000533704 POLR2GP62487 172 aaKnown RBP eCLIP7.61□□□□□ -1.19
CAPN1-225ENST00000533704 ZNF846Q147U1 533 aa7.61□□□□□ -1.19
CAPN1-225ENST00000533704 OR8I2Q8N0Y5 310 aa7.61□□□□□ -1.19
CAPN1-225ENST00000533704 LINC00476Q8WZB0 136 aa7.61□□□□□ -1.19
CAPN1-225ENST00000533704 TRGV9Q99603 122 aa7.61□□□□□ -1.19
CAPN1-225ENST00000533704 SDHCQ99643 169 aaPredicted RBP7.61□□□□□ -1.19
CAPN1-225ENST00000533704 C11orf68Q9H3H3 251 aaKnown RBP7.61□□□□□ -1.19
CAPN1-225ENST00000533704 DNAH1Q9P2D7 4330 aa7.61□□□□□ -1.19
CAPN1-225ENST00000533704 IGKV1OR2-108A0A075B7D4 117 aa7.6□□□□□ -1.19
CAPN1-225ENST00000533704 IGHV4-28A0A0C4DH34 117 aa7.6□□□□□ -1.19
CAPN1-225ENST00000533704 SSSCA1O60232 199 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms