RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 TMEM116Q8NCL8 245 aa9.17□□□□□ -0.94
SF3B2-213ENST00000533421 OR11H7Q8NGC8 314 aa9.17□□□□□ -0.94
SF3B2-213ENST00000533421 MUC7Q8TAX7 377 aa9.17□□□□□ -0.94
SF3B2-213ENST00000533421 NARS2Q96I59 477 aaKnown RBP9.17□□□□□ -0.94
SF3B2-213ENST00000533421 SLC35E1Q96K37 410 aa9.17□□□□□ -0.94
SF3B2-213ENST00000533421 CITED4Q96RK1 184 aa9.17□□□□□ -0.94
SF3B2-213ENST00000533421 TMEM231Q9H6L2 316 aa9.17□□□□□ -0.94
SF3B2-213ENST00000533421 IGKV1D-37A0A075B6S9 117 aa9.16□□□□□ -0.94
SF3B2-213ENST00000533421 IGSF23A1L1A6 192 aa9.16□□□□□ -0.94
SF3B2-213ENST00000533421 H0YIZ8 118 aa9.16□□□□□ -0.94
SF3B2-213ENST00000533421 APOHP02749 345 aaPredicted RBP9.16□□□□□ -0.94
SF3B2-213ENST00000533421 SLC25A4P12235 298 aa9.16□□□□□ -0.94
SF3B2-213ENST00000533421 CAV2P51636 162 aa9.16□□□□□ -0.94
SF3B2-213ENST00000533421 PAFAH1B2P68402 229 aa9.16□□□□□ -0.94
SF3B2-213ENST00000533421 RPP30P78346 268 aaKnown RBP9.16□□□□□ -0.94
SF3B2-213ENST00000533421 OR2F1Q13607 317 aa9.16□□□□□ -0.94
SF3B2-213ENST00000533421 TMEM14EPQ6UXP3 125 aa9.16□□□□□ -0.94
SF3B2-213ENST00000533421 IL17DQ8TAD2 202 aa9.16□□□□□ -0.94
SF3B2-213ENST00000533421 RAB40CQ96S21 281 aa9.16□□□□□ -0.94
SF3B2-213ENST00000533421 FAM110AQ9BQ89 295 aa9.16□□□□□ -0.94
SF3B2-213ENST00000533421 MED28Q9H204 178 aa9.16□□□□□ -0.94
SF3B2-213ENST00000533421 ZFAND3Q9H8U3 227 aa9.16□□□□□ -0.94
SF3B2-213ENST00000533421 SMPXQ9UHP9 88 aa9.16□□□□□ -0.94
SF3B2-213ENST00000533421 DNAH9Q9NYC9 4486 aa9.16□□□□□ -0.94
SF3B2-213ENST00000533421 IGKV1OR2-108A0A075B7D4 117 aa9.15□□□□□ -0.94
SF3B2-213ENST00000533421 LOC102724200A0A096LPH7 203 aaPredicted RBP9.15□□□□□ -0.94
SF3B2-213ENST00000533421 IGHV7-4-1A0A0J9YVY3 117 aa9.15□□□□□ -0.94
SF3B2-213ENST00000533421 A0A1W2PS18 150 aa9.15□□□□□ -0.94
SF3B2-213ENST00000533421 ZFP92A6NM28 416 aa9.15□□□□□ -0.94
SF3B2-213ENST00000533421 LYL1P12980 280 aa9.15□□□□□ -0.94
SF3B2-213ENST00000533421 TMEM217Q8N7C4 229 aa9.15□□□□□ -0.94
SF3B2-213ENST00000533421 OR1S2Q8NGQ3 325 aa9.15□□□□□ -0.94
SF3B2-213ENST00000533421 PPP1R1CQ8WVI7 109 aa9.15□□□□□ -0.94
SF3B2-213ENST00000533421 GGTLC1Q9BX51 225 aa9.15□□□□□ -0.94
SF3B2-213ENST00000533421 IGKV3-7A0A075B6H7 116 aa9.14□□□□□ -0.95
SF3B2-213ENST00000533421 TSC22D2O75157 780 aa9.14□□□□□ -0.95
SF3B2-213ENST00000533421 DEDDO75618 318 aa9.14□□□□□ -0.95
SF3B2-213ENST00000533421 GATA2P23769 480 aaPredicted RBP9.14□□□□□ -0.95
SF3B2-213ENST00000533421 GPX4P36969 197 aaPredicted RBP9.14□□□□□ -0.95
SF3B2-213ENST00000533421 EIF2B2P49770 351 aaKnown RBP9.14□□□□□ -0.95
SF3B2-213ENST00000533421 APOC4P55056 127 aa9.14□□□□□ -0.95
SF3B2-213ENST00000533421 ATP5IP56385 69 aaPredicted RBP9.14□□□□□ -0.95
SF3B2-213ENST00000533421 AKR1C1Q04828 323 aa9.14□□□□□ -0.95
SF3B2-213ENST00000533421 LINC00322Q6ZN03 302 aaPredicted RBP9.14□□□□□ -0.95
SF3B2-213ENST00000533421 TMEM182Q6ZP80 229 aaPredicted RBP9.14□□□□□ -0.95
SF3B2-213ENST00000533421 RHPN1-AS1Q9BWJ2 59 aa9.14□□□□□ -0.95
SF3B2-213ENST00000533421 NMES1Q9C002 83 aa9.14□□□□□ -0.95
SF3B2-213ENST00000533421 CHEK1O14757 476 aa9.13□□□□□ -0.95
SF3B2-213ENST00000533421 PSG1P11464 419 aa9.13□□□□□ -0.95
SF3B2-213ENST00000533421 PVALBP20472 110 aaPredicted RBP9.13□□□□□ -0.95
SF3B2-213ENST00000533421 NPPCP23582 126 aa9.13□□□□□ -0.95
SF3B2-213ENST00000533421 TAS2R30P59541 319 aa9.13□□□□□ -0.95
SF3B2-213ENST00000533421 SLC38A11Q08AI6 406 aa9.13□□□□□ -0.95
SF3B2-213ENST00000533421 USF2Q15853 346 aaPredicted RBP9.13□□□□□ -0.95
SF3B2-213ENST00000533421 LILRB2Q8N423 598 aa9.13□□□□□ -0.95
SF3B2-213ENST00000533421 OR51G1Q8NGK1 321 aa9.13□□□□□ -0.95
SF3B2-213ENST00000533421 ST8SIA2Q92186 375 aa9.13□□□□□ -0.95
SF3B2-213ENST00000533421 GRAMD2BQ96HH9 432 aa9.13□□□□□ -0.95
SF3B2-213ENST00000533421 METTL26Q96S19 204 aa9.13□□□□□ -0.95
SF3B2-213ENST00000533421 RNF126Q9BV68 326 aa9.13□□□□□ -0.95
SF3B2-213ENST00000533421 PBDC1Q9BVG4 233 aa9.13□□□□□ -0.95
SF3B2-213ENST00000533421 TENM3Q9P273 2699 aa9.13□□□□□ -0.95
SF3B2-213ENST00000533421 RBMY1BA6NDE4 496 aaKnown RBP9.12□□□□□ -0.95
SF3B2-213ENST00000533421 RBMY1EA6NEQ0 496 aaKnown RBP9.12□□□□□ -0.95
SF3B2-213ENST00000533421 UBE2CO00762 179 aa9.12□□□□□ -0.95
SF3B2-213ENST00000533421 MPC2O95563 127 aa9.12□□□□□ -0.95
SF3B2-213ENST00000533421 TOMM40O96008 361 aa9.12□□□□□ -0.95
SF3B2-213ENST00000533421 IL4P05112 153 aa9.12□□□□□ -0.95
SF3B2-213ENST00000533421 RBMY1DP0C7P1 496 aaKnown RBP9.12□□□□□ -0.95
SF3B2-213ENST00000533421 RD3LP0DJH9 198 aa9.12□□□□□ -0.95
SF3B2-213ENST00000533421 LYZP61626 148 aa9.12□□□□□ -0.95
SF3B2-213ENST00000533421 NHLH2Q02577 135 aa9.12□□□□□ -0.95
SF3B2-213ENST00000533421 Q5BKY6 102 aa9.12□□□□□ -0.95
SF3B2-213ENST00000533421 TMEM252Q8N6L7 170 aa9.12□□□□□ -0.95
SF3B2-213ENST00000533421 THAP8Q8NA92 274 aa9.12□□□□□ -0.95
SF3B2-213ENST00000533421 OR10P1Q8NGE3 313 aa9.12□□□□□ -0.95
SF3B2-213ENST00000533421 Q8WTZ3 238 aa9.12□□□□□ -0.95
SF3B2-213ENST00000533421 RNF2Q99496 336 aa9.12□□□□□ -0.95
SF3B2-213ENST00000533421 WFDC10AQ9H1F0 79 aa9.12□□□□□ -0.95
SF3B2-213ENST00000533421 LYRM2Q9NU23 88 aaPredicted RBP9.12□□□□□ -0.95
SF3B2-213ENST00000533421 MBD2Q9UBB5 411 aa9.12□□□□□ -0.95
SF3B2-213ENST00000533421 DNASE2O00115 360 aaPredicted RBP9.11□□□□□ -0.95
SF3B2-213ENST00000533421 TFPI2P48307 235 aa9.11□□□□□ -0.95
SF3B2-213ENST00000533421 YPEL3P61236 119 aaPredicted RBP9.11□□□□□ -0.95
SF3B2-213ENST00000533421 RPL11P62913 178 aaKnown RBP9.11□□□□□ -0.95
SF3B2-213ENST00000533421 DLK1P80370 383 aa9.11□□□□□ -0.95
SF3B2-213ENST00000533421 GBGT1Q8N5D6 347 aa9.11□□□□□ -0.95
SF3B2-213ENST00000533421 DOK5Q9P104 306 aa9.11□□□□□ -0.95
SF3B2-213ENST00000533421 PFDN2Q9UHV9 154 aa9.11□□□□□ -0.95
SF3B2-213ENST00000533421 STAB2Q8WWQ8 2551 aa9.1□□□□□ -0.95
SF3B2-213ENST00000533421 TRAV2A0A0B4J234 112 aa9.1□□□□□ -0.95
SF3B2-213ENST00000533421 KIR2DL5BA0A0G2JN68 375 aa9.1□□□□□ -0.95
SF3B2-213ENST00000533421 KIR2DL5BA0A0G2JPC4 375 aa9.1□□□□□ -0.95
SF3B2-213ENST00000533421 UBE2L5PA0A1B0GUS4 154 aa9.1□□□□□ -0.95
SF3B2-213ENST00000533421 E5RGE8 158 aa9.1□□□□□ -0.95
SF3B2-213ENST00000533421 SMLR1H3BR10 107 aa9.1□□□□□ -0.95
SF3B2-213ENST00000533421 DFFBO76075 338 aa9.1□□□□□ -0.95
SF3B2-213ENST00000533421 RLN2P04090 185 aa9.1□□□□□ -0.95
SF3B2-213ENST00000533421 FABP1P07148 127 aa9.1□□□□□ -0.95
SF3B2-213ENST00000533421 NUP62P37198 522 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms