RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 STAG3L2P0CL84 134 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 STAG3L3P0CL85 134 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 PF4V1P10720 104 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 THBS3P49746 956 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 LGALS4P56470 323 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 FAM3BP58499 235 aaPredicted RBP6.47□□□□□ -1.37
NEDD8-207ENST00000533242 EGFEM1PQ0D2K5 195 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 STPG3Q8N7X2 389 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 OR10D4PQ8NGN7 298 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 OR13D1Q8NGV5 346 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 MRPL20Q9BYC9 149 aaKnown RBP6.47□□□□□ -1.37
NEDD8-207ENST00000533242 CTDSP1Q9GZU7 261 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 OR51B2Q9Y5P1 312 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 NOTCH3Q9UM47 2321 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 A0A1W2PPQ1 181 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 ZNF729A6NN14 1252 aaPredicted RBP6.47□□□□□ -1.37
NEDD8-207ENST00000533242 SAA1P0DJI8 122 aaPredicted RBP6.47□□□□□ -1.37
NEDD8-207ENST00000533242 KIR2DS2P43631 304 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 POU2AF1Q16633 256 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 TMEM200BQ69YZ2 307 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.47□□□□□ -1.37
NEDD8-207ENST00000533242 OR10A7Q8NGE5 316 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 CORO2AQ92828 525 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 PITPNC1Q9UKF7 332 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 A0A1W2PRX2 142 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 J3QR06 171 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 MPDU1O75352 247 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 ACTL6BO94805 426 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 PF4P02776 101 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 LINC00869P0C866 280 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 RPL31P62899 125 aaKnown RBP6.46□□□□□ -1.38
NEDD8-207ENST00000533242 PRR20EP86478 221 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 PRR20CP86479 221 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 PRR20DP86480 221 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 PRR20BP86481 221 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 PRR20AP86496 221 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 OR5AU1Q8NGC0 362 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 TCEAL7Q9BRU2 100 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 OR51M1Q9H341 326 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 NPVFQ9HCQ7 196 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 SLC35D1Q9NTN3 355 aa6.46□□□□□ -1.38
NEDD8-207ENST00000533242 GAR1Q9NY12 217 aaKnown RBP6.46□□□□□ -1.38
NEDD8-207ENST00000533242 TBL2Q9Y4P3 447 aaKnown RBP6.46□□□□□ -1.38
NEDD8-207ENST00000533242 TEX50A0A1B0GTY4 177 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 UPK2O00526 184 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 PPP1R2P9O14990 202 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 HRASP01112 189 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 FABP4P15090 132 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 COX7A1P24310 79 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 S100A12P80511 92 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 C10orf55Q5SWW7 151 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 TEPPQ6URK8 271 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 MIR17HGQ75NE6 70 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 DYNAPQ8N1N2 210 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 C11orf42Q8N5U0 333 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 OR9G1Q8NH87 305 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 SRD5A3Q9H8P0 318 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 LINC00312Q9Y6C7 94 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 CGB1A6NKQ9 187 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 IGHV3-48P01763 117 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 NHLRC4P0CG21 123 aaPredicted RBP6.45□□□□□ -1.38
NEDD8-207ENST00000533242 GCHFRP30047 84 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 RPP30P78346 268 aaKnown RBP6.45□□□□□ -1.38
NEDD8-207ENST00000533242 SSBP2P81877 361 aaPredicted RBP6.45□□□□□ -1.38
NEDD8-207ENST00000533242 PRCDQ00LT1 54 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 MORN5Q5VZ52 161 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 ZNF833PQ6ZTB9 187 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 LHFPL4Q7Z7J7 247 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 TMEM219Q86XT9 240 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 DPF1Q92782 380 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 ZNF503Q96F45 646 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 RITA1Q96K30 269 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 HIST1H2BLQ99880 126 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 KCNIP2Q9NS61 270 aa6.45□□□□□ -1.38
NEDD8-207ENST00000533242 TSSC4Q9Y5U2 329 aaPredicted RBP6.45□□□□□ -1.38
NEDD8-207ENST00000533242 TCRBV4S1A1TA0A5B7 111 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 hADV38S2A0JD32 116 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 H0YJW9 148 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 K7EN84 100 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 GGCTO75223 188 aaKnown RBP6.44□□□□□ -1.38
NEDD8-207ENST00000533242 S100PP25815 95 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 IL3RAP26951 378 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 FAM78BQ5VT40 261 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 Q6ZS46 218 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 OR4P4Q8NGL7 312 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 TPSG1Q9NRR2 321 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 COL7A1Q02388 2944 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 ODF3BA8MYP8 253 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 C3orf84H3BNL1 204 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 PDE6DO43924 150 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 CXorf1O96002 111 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 FRMD6-AS1P0C7T7 363 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 RNASE2P10153 161 aaKnown RBP6.44□□□□□ -1.38
NEDD8-207ENST00000533242 RPL29P47914 159 aaKnown RBP6.44□□□□□ -1.38
NEDD8-207ENST00000533242 BLCAPP62952 87 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 GAMTQ14353 236 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 HLA-DRB5Q30154 266 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 TMEM95Q3KNT9 176 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 OCC1Q8TAD7 63 aa6.44□□□□□ -1.38
NEDD8-207ENST00000533242 TMEM37Q8WXS4 190 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms