RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 NUP35Q8NFH5 326 aa11.91□□□□□ -0.5
SSH3-210ENST00000532881 TMEM68Q96MH6 324 aa11.91□□□□□ -0.5
SSH3-210ENST00000532881 TMEM133Q9H2Q1 129 aa11.91□□□□□ -0.5
SSH3-210ENST00000532881 KIR2DL5BA0A0G2JN68 375 aa11.91□□□□□ -0.5
SSH3-210ENST00000532881 KIR2DL5BA0A0G2JPC4 375 aa11.91□□□□□ -0.5
SSH3-210ENST00000532881 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.91□□□□□ -0.5
SSH3-210ENST00000532881 FOXC1Q12948 553 aa11.91□□□□□ -0.5
SSH3-210ENST00000532881 BATFQ16520 125 aa11.91□□□□□ -0.5
SSH3-210ENST00000532881 MAJINQ3KP22 176 aa11.91□□□□□ -0.5
SSH3-210ENST00000532881 FBLN7Q53RD9 439 aa11.91□□□□□ -0.5
SSH3-210ENST00000532881 LDLRAD2Q5SZI1 272 aa11.91□□□□□ -0.5
SSH3-210ENST00000532881 KIR2DL5AQ8N109 375 aa11.91□□□□□ -0.5
SSH3-210ENST00000532881 MRPL32Q9BYC8 188 aaKnown RBP11.91□□□□□ -0.5
SSH3-210ENST00000532881 NRN1Q9NPD7 142 aa11.91□□□□□ -0.5
SSH3-210ENST00000532881 COL6A6A6NMZ7 2263 aa11.91□□□□□ -0.5
SSH3-210ENST00000532881 ANKHD1Q8IWZ3 2542 aaKnown RBP11.9□□□□□ -0.5
SSH3-210ENST00000532881 IGHV2-26A0A0B4J1V2 119 aa11.9□□□□□ -0.5
SSH3-210ENST00000532881 M0QZ24 198 aa11.9□□□□□ -0.5
SSH3-210ENST00000532881 Q0VG73 95 aa11.9□□□□□ -0.5
SSH3-210ENST00000532881 CDSNQ15517 529 aa11.9□□□□□ -0.5
SSH3-210ENST00000532881 VMA21Q3ZAQ7 101 aa11.9□□□□□ -0.5
SSH3-210ENST00000532881 PNKDQ8N490 385 aa11.9□□□□□ -0.5
SSH3-210ENST00000532881 BEND2Q8NDZ0 799 aa11.9□□□□□ -0.5
SSH3-210ENST00000532881 VSTM2AQ8TAG5 236 aa11.9□□□□□ -0.5
SSH3-210ENST00000532881 JKAMPQ9P055 326 aa11.9□□□□□ -0.5
SSH3-210ENST00000532881 FAM90A27PA6NNH2 459 aa11.9□□□□□ -0.5
SSH3-210ENST00000532881 AMY1AP04745 511 aa11.9□□□□□ -0.5
SSH3-210ENST00000532881 Q8N976 141 aa11.9□□□□□ -0.5
SSH3-210ENST00000532881 C19orf24Q9BVV8 132 aa11.9□□□□□ -0.5
SSH3-210ENST00000532881 CHODLQ9H9P2 273 aa11.9□□□□□ -0.5
SSH3-210ENST00000532881 APCSP02743 223 aa11.89□□□□□ -0.51
SSH3-210ENST00000532881 PAFAH1B2P68402 229 aa11.89□□□□□ -0.51
SSH3-210ENST00000532881 LCN12Q6JVE5 192 aa11.89□□□□□ -0.51
SSH3-210ENST00000532881 INSIG2Q9Y5U4 225 aa11.89□□□□□ -0.51
SSH3-210ENST00000532881 TRAV9-1A0A075B6T8 112 aa11.89□□□□□ -0.51
SSH3-210ENST00000532881 HIGD1CA8MV81 97 aa11.89□□□□□ -0.51
SSH3-210ENST00000532881 BRS3P32247 399 aa11.89□□□□□ -0.51
SSH3-210ENST00000532881 RPL27AP46776 148 aaKnown RBP11.89□□□□□ -0.51
SSH3-210ENST00000532881 SUB1P53999 127 aaKnown RBP eCLIP11.89□□□□□ -0.51
SSH3-210ENST00000532881 NEU1Q99519 415 aa11.89□□□□□ -0.51
SSH3-210ENST00000532881 ARL2-SNX15V9GYD0 113 aa11.89□□□□□ -0.51
SSH3-210ENST00000532881 AKAP6Q13023 2319 aa11.89□□□□□ -0.51
SSH3-210ENST00000532881 IZUMO1RA6ND01 250 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 SIAH2O43255 324 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 BPIFB3P59826 476 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 PMCHL1Q16048 86 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 TMEM30BQ3MIR4 351 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 KLF17Q5JT82 389 aaPredicted RBP11.88□□□□□ -0.51
SSH3-210ENST00000532881 SPACA3Q8IXA5 215 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 EXOC3-AS1Q8N2X6 119 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 ZNF331Q9NQX6 463 aaPredicted RBP11.88□□□□□ -0.51
SSH3-210ENST00000532881 WNK2Q9Y3S1 2297 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 IGHV1-3A0A0C4DH29 117 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 SH2D7A6NKC9 451 aaPredicted RBP11.88□□□□□ -0.51
SSH3-210ENST00000532881 DIRC3C9JPN6 131 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 TCAPO15273 167 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 NBEAP1P0C6P0 100 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 ESDP10768 282 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 LYZP61626 148 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 NUTF2P61970 127 aaKnown RBP11.88□□□□□ -0.51
SSH3-210ENST00000532881 TBR1Q16650 682 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 TEX43Q6ZNM6 134 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 THAP8Q8NA92 274 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 OR1L4Q8NGR5 311 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 TSKUQ8WUA8 353 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 C17orf77Q96MU5 243 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 EPDR1Q9UM22 224 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 SIGLEC9Q9Y336 463 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 CACNA1BQ00975 2339 aa11.88□□□□□ -0.51
SSH3-210ENST00000532881 UBE2G1P62253 170 aa11.87□□□□□ -0.51
SSH3-210ENST00000532881 NIT1Q86X76 327 aa11.87□□□□□ -0.51
SSH3-210ENST00000532881 BCL6BQ8N143 479 aaPredicted RBP11.87□□□□□ -0.51
SSH3-210ENST00000532881 LINC00311Q8N616 119 aa11.87□□□□□ -0.51
SSH3-210ENST00000532881 OR2D3Q8NGH3 330 aa11.87□□□□□ -0.51
SSH3-210ENST00000532881 VAMP8Q9BV40 100 aa11.87□□□□□ -0.51
SSH3-210ENST00000532881 ZNF835Q9Y2P0 537 aa11.87□□□□□ -0.51
SSH3-210ENST00000532881 FOXA3P55318 350 aaPredicted RBP11.87□□□□□ -0.51
SSH3-210ENST00000532881 MAP1AP78559 2803 aaPredicted RBP11.87□□□□□ -0.51
SSH3-210ENST00000532881 CYB5R2Q6BCY4 276 aa11.87□□□□□ -0.51
SSH3-210ENST00000532881 ZNF596Q8TC21 504 aa11.87□□□□□ -0.51
SSH3-210ENST00000532881 C18orf32Q8TCD1 76 aa11.87□□□□□ -0.51
SSH3-210ENST00000532881 MBD6Q96DN6 1003 aa11.87□□□□□ -0.51
SSH3-210ENST00000532881 KCNS1Q96KK3 526 aa11.87□□□□□ -0.51
SSH3-210ENST00000532881 HILPDAQ9Y5L2 63 aa11.87□□□□□ -0.51
SSH3-210ENST00000532881 IGLV1-47P01700 117 aa11.86□□□□□ -0.51
SSH3-210ENST00000532881 C3orf79P0CE67 100 aa11.86□□□□□ -0.51
SSH3-210ENST00000532881 PSG1P11464 419 aa11.86□□□□□ -0.51
SSH3-210ENST00000532881 MYCNOSP40205 109 aa11.86□□□□□ -0.51
SSH3-210ENST00000532881 SSTP61278 116 aa11.86□□□□□ -0.51
SSH3-210ENST00000532881 C7orf69Q9H7B7 122 aa11.86□□□□□ -0.51
SSH3-210ENST00000532881 BUB1B-PAK6H3BSN5 160 aa11.86□□□□□ -0.51
SSH3-210ENST00000532881 RBP4P02753 201 aa11.86□□□□□ -0.51
SSH3-210ENST00000532881 ZNF137PP52743 207 aa11.86□□□□□ -0.51
SSH3-210ENST00000532881 ATP5IP56385 69 aaPredicted RBP11.86□□□□□ -0.51
SSH3-210ENST00000532881 PLGLAQ15195 96 aa11.86□□□□□ -0.51
SSH3-210ENST00000532881 WDR73Q6P4I2 378 aa11.86□□□□□ -0.51
SSH3-210ENST00000532881 PPP1R27Q86WC6 154 aa11.86□□□□□ -0.51
SSH3-210ENST00000532881 OR4A5Q8NH83 315 aa11.86□□□□□ -0.51
SSH3-210ENST00000532881 ONECUT1Q9UBC0 465 aa11.86□□□□□ -0.51
SSH3-210ENST00000532881 TP73-AS1Q9UF72 201 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms