RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	PSENEN	Q9NZ42	101 aa		12.94	□□□□□ -0.34
CTSB-223	ENST00000532370	STRAP	Q9Y3F4	350 aa	Known RBP	12.94	□□□□□ -0.34
CTSB-223	ENST00000532370		U3KQE9	123 aa		12.94	□□□□□ -0.34
CTSB-223	ENST00000532370	FAM25E	A8MYX2	175 aa		12.93	□□□□□ -0.34
CTSB-223	ENST00000532370	MBP	P02686	304 aa	Predicted RBP	12.93	□□□□□ -0.34
CTSB-223	ENST00000532370	P2RY1	P47900	373 aa		12.93	□□□□□ -0.34
CTSB-223	ENST00000532370	APRG1	Q8IVJ8	170 aa		12.93	□□□□□ -0.34
CTSB-223	ENST00000532370	C12orf45	Q8N5I9	185 aa	Predicted RBP	12.93	□□□□□ -0.34
CTSB-223	ENST00000532370	OR51G1	Q8NGK1	321 aa		12.93	□□□□□ -0.34
CTSB-223	ENST00000532370	SPATA25	Q9BR10	227 aa		12.93	□□□□□ -0.34
CTSB-223	ENST00000532370		A0A1W2PS18	150 aa		12.92	□□□□□ -0.34
CTSB-223	ENST00000532370	CCNK	O75909	580 aa		12.92	□□□□□ -0.34
CTSB-223	ENST00000532370	PTTG1	O95997	202 aa		12.92	□□□□□ -0.34
CTSB-223	ENST00000532370	HNRNPC	P07910	306 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
CTSB-223	ENST00000532370	OR2F1	Q13607	317 aa		12.92	□□□□□ -0.34
CTSB-223	ENST00000532370	FAM24B	Q8N5W8	94 aa		12.92	□□□□□ -0.34
CTSB-223	ENST00000532370	SMIM8	Q96KF7	97 aa		12.92	□□□□□ -0.34
CTSB-223	ENST00000532370	FAM110A	Q9BQ89	295 aa		12.92	□□□□□ -0.34
CTSB-223	ENST00000532370	GGTLC1	Q9BX51	225 aa		12.92	□□□□□ -0.34
CTSB-223	ENST00000532370	TMEM231	Q9H6L2	316 aa		12.92	□□□□□ -0.34
CTSB-223	ENST00000532370	RCL1	Q9Y2P8	373 aa	Known RBP	12.92	□□□□□ -0.34
CTSB-223	ENST00000532370	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	12.91	□□□□□ -0.34
CTSB-223	ENST00000532370	DNASE2	O00115	360 aa	Predicted RBP	12.91	□□□□□ -0.34
CTSB-223	ENST00000532370	CD5	P06127	495 aa		12.91	□□□□□ -0.34
CTSB-223	ENST00000532370	PAFAH1B2	P68402	229 aa		12.91	□□□□□ -0.34
CTSB-223	ENST00000532370	OR8G2P	Q6IF36	304 aa		12.91	□□□□□ -0.34
CTSB-223	ENST00000532370	ACOT7L	Q6ZUV0	252 aa		12.91	□□□□□ -0.34
CTSB-223	ENST00000532370	THAP8	Q8NA92	274 aa		12.91	□□□□□ -0.34
CTSB-223	ENST00000532370	RNF125	Q96EQ8	232 aa		12.91	□□□□□ -0.34
CTSB-223	ENST00000532370	NARS2	Q96I59	477 aa	Known RBP	12.91	□□□□□ -0.34
CTSB-223	ENST00000532370	MARVELD1	Q9BSK0	173 aa		12.91	□□□□□ -0.34
CTSB-223	ENST00000532370	PBDC1	Q9BVG4	233 aa		12.91	□□□□□ -0.34
CTSB-223	ENST00000532370	RABAC1	Q9UI14	185 aa		12.91	□□□□□ -0.34
CTSB-223	ENST00000532370	C5orf51	A6NDU8	294 aa		12.9	□□□□□ -0.34
CTSB-223	ENST00000532370	PMS2P5	A8MQ11	134 aa		12.9	□□□□□ -0.34
CTSB-223	ENST00000532370	IL5	P05113	134 aa		12.9	□□□□□ -0.34
CTSB-223	ENST00000532370	C16orf54	Q6UWD8	224 aa		12.9	□□□□□ -0.34
CTSB-223	ENST00000532370	STXBP6	Q8NFX7	210 aa		12.9	□□□□□ -0.34
CTSB-223	ENST00000532370	GLMP	Q8WWB7	406 aa		12.9	□□□□□ -0.34
CTSB-223	ENST00000532370	TRGV9	Q99603	122 aa		12.9	□□□□□ -0.34
CTSB-223	ENST00000532370	MAP6D1	Q9H9H5	199 aa		12.9	□□□□□ -0.34
CTSB-223	ENST00000532370	C7orf66	A4D0T2	115 aa		12.89	□□□□□ -0.35
CTSB-223	ENST00000532370	METTL15P1	P0C7V9	234 aa		12.89	□□□□□ -0.35
CTSB-223	ENST00000532370	RPL35A	P18077	110 aa	Known RBP	12.89	□□□□□ -0.35
CTSB-223	ENST00000532370	TMEM14EP	Q6UXP3	125 aa		12.89	□□□□□ -0.35
CTSB-223	ENST00000532370	TMEM182	Q6ZP80	229 aa	Predicted RBP	12.89	□□□□□ -0.35
CTSB-223	ENST00000532370	STPG3	Q8N7X2	389 aa		12.89	□□□□□ -0.35
CTSB-223	ENST00000532370	GRAMD2B	Q96HH9	432 aa		12.89	□□□□□ -0.35
CTSB-223	ENST00000532370	RAB40C	Q96S21	281 aa		12.89	□□□□□ -0.35
CTSB-223	ENST00000532370	SNRPGP15	A8MWD9	76 aa		12.88	□□□□□ -0.35
CTSB-223	ENST00000532370	INMT-MINDY4	F8WBC2	141 aa		12.88	□□□□□ -0.35
CTSB-223	ENST00000532370	BUB3	O43684	328 aa		12.88	□□□□□ -0.35
CTSB-223	ENST00000532370	PRAF2	O60831	178 aa		12.88	□□□□□ -0.35
CTSB-223	ENST00000532370	GATA2	P23769	480 aa	Predicted RBP	12.88	□□□□□ -0.35
CTSB-223	ENST00000532370	LYZ	P61626	148 aa		12.88	□□□□□ -0.35
CTSB-223	ENST00000532370	RRAS2	P62070	204 aa	Predicted RBP	12.88	□□□□□ -0.35
CTSB-223	ENST00000532370	AKR1C1	Q04828	323 aa		12.88	□□□□□ -0.35
CTSB-223	ENST00000532370	LSM5	Q9Y4Y9	91 aa	Known RBP	12.88	□□□□□ -0.35
CTSB-223	ENST00000532370	TRAV2	A0A0B4J234	112 aa		12.87	□□□□□ -0.35
CTSB-223	ENST00000532370	SMCO3	A2RU48	225 aa		12.87	□□□□□ -0.35
CTSB-223	ENST00000532370		K7EPK0	472 aa		12.87	□□□□□ -0.35
CTSB-223	ENST00000532370		K7EQG2	157 aa		12.87	□□□□□ -0.35
CTSB-223	ENST00000532370	EIF2B2	P49770	351 aa	Known RBP	12.87	□□□□□ -0.35
CTSB-223	ENST00000532370	TAS2R30	P59541	319 aa		12.87	□□□□□ -0.35
CTSB-223	ENST00000532370	DEFB131A	P59861	70 aa		12.87	□□□□□ -0.35
CTSB-223	ENST00000532370	ARL16	Q0P5N6	197 aa		12.87	□□□□□ -0.35
CTSB-223	ENST00000532370	LEMD1	Q68G75	181 aa		12.87	□□□□□ -0.35
CTSB-223	ENST00000532370	DCANP1	Q8TF63	244 aa		12.87	□□□□□ -0.35
CTSB-223	ENST00000532370	C2orf50	Q96LR7	162 aa		12.87	□□□□□ -0.35
CTSB-223	ENST00000532370	STARD9	Q9P2P6	4700 aa		12.87	□□□□□ -0.35
CTSB-223	ENST00000532370	TSC22D2	O75157	780 aa		12.86	□□□□□ -0.35
CTSB-223	ENST00000532370	FABP1	P07148	127 aa		12.86	□□□□□ -0.35
CTSB-223	ENST00000532370	CMC4	P56277	68 aa	Predicted RBP	12.86	□□□□□ -0.35
CTSB-223	ENST00000532370	RGS21	Q2M5E4	152 aa		12.86	□□□□□ -0.35
CTSB-223	ENST00000532370	GSG1L	Q6UXU4	331 aa		12.86	□□□□□ -0.35
CTSB-223	ENST00000532370	TMEM144	Q7Z5S9	345 aa		12.86	□□□□□ -0.35
CTSB-223	ENST00000532370	EDA2R	Q9HAV5	297 aa		12.86	□□□□□ -0.35
CTSB-223	ENST00000532370	HELT	A6NFD8	242 aa		12.85	□□□□□ -0.35
CTSB-223	ENST00000532370	ZNF688	P0C7X2	276 aa		12.85	□□□□□ -0.35
CTSB-223	ENST00000532370	IL15RA	Q13261	267 aa		12.85	□□□□□ -0.35
CTSB-223	ENST00000532370	SIGLEC15	Q6ZMC9	328 aa		12.85	□□□□□ -0.35
CTSB-223	ENST00000532370	OVOL2	Q9BRP0	275 aa		12.85	□□□□□ -0.35
CTSB-223	ENST00000532370	C11orf1	Q9H5F2	150 aa		12.85	□□□□□ -0.35
CTSB-223	ENST00000532370	GPN1	Q9HCN4	374 aa	Predicted RBP	12.85	□□□□□ -0.35
CTSB-223	ENST00000532370		L7N2F9	121 aa		12.84	□□□□□ -0.35
CTSB-223	ENST00000532370	SIX6	O95475	246 aa		12.84	□□□□□ -0.35
CTSB-223	ENST00000532370	APOC4	P55056	127 aa		12.84	□□□□□ -0.35
CTSB-223	ENST00000532370	S100A10	P60903	97 aa		12.84	□□□□□ -0.35
CTSB-223	ENST00000532370	VAMP2	P63027	116 aa		12.84	□□□□□ -0.35
CTSB-223	ENST00000532370	DLK1	P80370	383 aa		12.84	□□□□□ -0.35
CTSB-223	ENST00000532370	OXA1L	Q15070	435 aa		12.84	□□□□□ -0.35
CTSB-223	ENST00000532370	OR10P1	Q8NGE3	313 aa		12.84	□□□□□ -0.35
CTSB-223	ENST00000532370	FAM24A	A6NFZ4	105 aa		12.83	□□□□□ -0.36
CTSB-223	ENST00000532370	ORM2	P19652	201 aa		12.83	□□□□□ -0.36
CTSB-223	ENST00000532370	BCAP31	P51572	246 aa		12.83	□□□□□ -0.36
CTSB-223	ENST00000532370	AP2S1	P53680	142 aa	Predicted RBP	12.83	□□□□□ -0.36
CTSB-223	ENST00000532370	RAB32	Q13637	225 aa		12.83	□□□□□ -0.36
CTSB-223	ENST00000532370	CYP2G1P	Q6ZSU1	146 aa		12.83	□□□□□ -0.36
CTSB-223	ENST00000532370	MUC7	Q8TAX7	377 aa		12.83	□□□□□ -0.36
CTSB-223	ENST00000532370	CSMD3	Q7Z407	3707 aa		12.82	□□□□□ -0.36

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