RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 DNAH2Q9P225 4427 aa10.63□□□□□ -0.71
CAPN1-219ENST00000530495 RYR1P21817 5038 aa10.62□□□□□ -0.71
CAPN1-219ENST00000530495 IGLV2-18A0A075B6J9 118 aa10.62□□□□□ -0.71
CAPN1-219ENST00000530495 TEX48A0A1B0GUV7 120 aa10.62□□□□□ -0.71
CAPN1-219ENST00000530495 CEBPZOSA8MTT3 80 aa10.62□□□□□ -0.71
CAPN1-219ENST00000530495 RAB3DO95716 219 aa10.62□□□□□ -0.71
CAPN1-219ENST00000530495 TAS2R19P59542 299 aa10.62□□□□□ -0.71
CAPN1-219ENST00000530495 OXA1LQ15070 435 aa10.62□□□□□ -0.71
CAPN1-219ENST00000530495 UBE2DNLQ8IWF7 75 aa10.62□□□□□ -0.71
CAPN1-219ENST00000530495 OR51G1Q8NGK1 321 aa10.62□□□□□ -0.71
CAPN1-219ENST00000530495 C15orf40Q8WUR7 153 aa10.62□□□□□ -0.71
CAPN1-219ENST00000530495 ACY3Q96HD9 319 aa10.62□□□□□ -0.71
CAPN1-219ENST00000530495 NIPSNAP3BQ9BS92 247 aa10.62□□□□□ -0.71
CAPN1-219ENST00000530495 CACFD1Q9UGQ2 172 aa10.62□□□□□ -0.71
CAPN1-219ENST00000530495 PKD1P98161 4303 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 IGHV3OR16-12A0A075B7B8 117 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 IGKV3-20P01619 116 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 NUP62P37198 522 aaPredicted RBP10.61□□□□□ -0.71
CAPN1-219ENST00000530495 FXYD7P58549 80 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 DEFB1P60022 68 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 NMSQ5H8A3 153 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 SOHLH1Q5JUK2 328 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 FAM222AQ5U5X8 452 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 STEAP1BQ6NZ63 245 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 FOXI2Q6ZQN5 318 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 ZNF709Q8N972 641 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 RNF125Q96EQ8 232 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 WDR12Q9GZL7 423 aaKnown RBP10.61□□□□□ -0.71
CAPN1-219ENST00000530495 NAA60Q9H7X0 242 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 PLA2G2EQ9NZK7 142 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 EXTL2Q9UBQ6 330 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 PFDN2Q9UHV9 154 aa10.61□□□□□ -0.71
CAPN1-219ENST00000530495 C14orf166Q9Y224 244 aaKnown RBP10.61□□□□□ -0.71
CAPN1-219ENST00000530495 TNFAIP8O95379 198 aa10.6□□□□□ -0.71
CAPN1-219ENST00000530495 ID1P41134 155 aa10.6□□□□□ -0.71
CAPN1-219ENST00000530495 KLF9Q13886 244 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-219ENST00000530495 MEF2DQ14814 521 aa10.6□□□□□ -0.71
CAPN1-219ENST00000530495 SURF2Q15527 256 aaPredicted RBP10.6□□□□□ -0.71
CAPN1-219ENST00000530495 TMEM268Q5VZI3 342 aa10.6□□□□□ -0.71
CAPN1-219ENST00000530495 LINC00052Q96N35 136 aa10.6□□□□□ -0.71
CAPN1-219ENST00000530495 KRTAP4-5Q9BYR2 181 aa10.6□□□□□ -0.71
CAPN1-219ENST00000530495 TMEM56-RWDD3S4R434 201 aa10.6□□□□□ -0.71
CAPN1-219ENST00000530495 NACAE9PAV3 2078 aa10.59□□□□□ -0.71
CAPN1-219ENST00000530495 SOCS3O14543 225 aa10.59□□□□□ -0.71
CAPN1-219ENST00000530495 PSMB3P49720 205 aa10.59□□□□□ -0.71
CAPN1-219ENST00000530495 SSBP1Q04837 148 aaKnown RBP10.59□□□□□ -0.71
CAPN1-219ENST00000530495 ZNF79Q15937 498 aa10.59□□□□□ -0.71
CAPN1-219ENST00000530495 C1orf194Q5T5A4 169 aa10.59□□□□□ -0.71
CAPN1-219ENST00000530495 C1orf134Q5TEV5 83 aa10.59□□□□□ -0.71
CAPN1-219ENST00000530495 GPR107Q5VW38 600 aa10.59□□□□□ -0.71
CAPN1-219ENST00000530495 SPATA31B1PQ5VZV4 182 aa10.59□□□□□ -0.71
CAPN1-219ENST00000530495 OR8G2PQ6IF36 304 aa10.59□□□□□ -0.71
CAPN1-219ENST00000530495 ZNF575Q86XF7 245 aa10.59□□□□□ -0.71
CAPN1-219ENST00000530495 OR4B1Q8NGF8 309 aa10.59□□□□□ -0.71
CAPN1-219ENST00000530495 AP3S1Q92572 193 aa10.59□□□□□ -0.71
CAPN1-219ENST00000530495 U3KQ87 197 aa10.59□□□□□ -0.71
CAPN1-219ENST00000530495 CRYM-AS1A6NIL9 109 aa10.58□□□□□ -0.72
CAPN1-219ENST00000530495 GABARAPH6UMI1 98 aa10.58□□□□□ -0.72
CAPN1-219ENST00000530495 GABARAPO95166 117 aa10.58□□□□□ -0.72
CAPN1-219ENST00000530495 SULT1A3P0DMM9 295 aa10.58□□□□□ -0.72
CAPN1-219ENST00000530495 SULT1A4P0DMN0 295 aa10.58□□□□□ -0.72
CAPN1-219ENST00000530495 ZNF182P17025 639 aaPredicted RBP10.58□□□□□ -0.72
CAPN1-219ENST00000530495 PAX9P55771 341 aa10.58□□□□□ -0.72
CAPN1-219ENST00000530495 PSG9Q00887 426 aa10.58□□□□□ -0.72
CAPN1-219ENST00000530495 C1orf158Q8N1D5 194 aa10.58□□□□□ -0.72
CAPN1-219ENST00000530495 PBDC1Q9BVG4 233 aa10.58□□□□□ -0.72
CAPN1-219ENST00000530495 SLC35B3Q9H1N7 401 aa10.58□□□□□ -0.72
CAPN1-219ENST00000530495 GPR132Q9UNW8 380 aa10.58□□□□□ -0.72
CAPN1-219ENST00000530495 GOLT1BQ9Y3E0 138 aa10.58□□□□□ -0.72
CAPN1-219ENST00000530495 HBE1P02100 147 aa10.57□□□□□ -0.72
CAPN1-219ENST00000530495 HTN3P15516 51 aa10.57□□□□□ -0.72
CAPN1-219ENST00000530495 GPX4P36969 197 aaPredicted RBP10.57□□□□□ -0.72
CAPN1-219ENST00000530495 SUPT4H1P63272 117 aaKnown RBP10.57□□□□□ -0.72
CAPN1-219ENST00000530495 ZNF90Q03938 601 aa10.57□□□□□ -0.72
CAPN1-219ENST00000530495 GAMTQ14353 236 aa10.57□□□□□ -0.72
CAPN1-219ENST00000530495 FAM78BQ5VT40 261 aa10.57□□□□□ -0.72
CAPN1-219ENST00000530495 FAAP20Q6NZ36 180 aa10.57□□□□□ -0.72
CAPN1-219ENST00000530495 COQ8AQ8NI60 647 aa10.57□□□□□ -0.72
CAPN1-219ENST00000530495 IL22RA2Q969J5 263 aa10.57□□□□□ -0.72
CAPN1-219ENST00000530495 HSPB7Q9UBY9 170 aa10.57□□□□□ -0.72
CAPN1-219ENST00000530495 YTHDF2Q9Y5A9 579 aaKnown RBP10.57□□□□□ -0.72
CAPN1-219ENST00000530495 IGKV1D-37A0A075B6S9 117 aa10.56□□□□□ -0.72
CAPN1-219ENST00000530495 LOC102723971A0A1B0GUV8 181 aa10.56□□□□□ -0.72
CAPN1-219ENST00000530495 ZFP92A6NM28 416 aa10.56□□□□□ -0.72
CAPN1-219ENST00000530495 DISC1C4P0D8 188 aa10.56□□□□□ -0.72
CAPN1-219ENST00000530495 ISLRO14498 428 aa10.56□□□□□ -0.72
CAPN1-219ENST00000530495 ATP5IP56385 69 aaPredicted RBP10.56□□□□□ -0.72
CAPN1-219ENST00000530495 FAM3BP58499 235 aaPredicted RBP10.56□□□□□ -0.72
CAPN1-219ENST00000530495 CTF1Q16619 201 aa10.56□□□□□ -0.72
CAPN1-219ENST00000530495 EBLN2Q6P2I7 272 aa10.56□□□□□ -0.72
CAPN1-219ENST00000530495 TMEM88Q6PEY1 159 aa10.56□□□□□ -0.72
CAPN1-219ENST00000530495 LGI3Q8N145 548 aa10.56□□□□□ -0.72
CAPN1-219ENST00000530495 C7orf50Q9BRJ6 194 aaKnown RBP10.56□□□□□ -0.72
CAPN1-219ENST00000530495 KCNIP3Q9Y2W7 256 aa10.56□□□□□ -0.72
CAPN1-219ENST00000530495 A0A0J9YX75 114 aa10.55□□□□□ -0.72
CAPN1-219ENST00000530495 SNRPGP15A8MWD9 76 aa10.55□□□□□ -0.72
CAPN1-219ENST00000530495 F6UB75 175 aa10.55□□□□□ -0.72
CAPN1-219ENST00000530495 FABP1P07148 127 aa10.55□□□□□ -0.72
CAPN1-219ENST00000530495 CCR6P51684 374 aa10.55□□□□□ -0.72
CAPN1-219ENST00000530495 MRPS10P82664 201 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms