RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 PRR20AP86496 221 aa9.43□□□□□ -0.9
CPSF1-204ENST00000529288 ZNF767PQ75MW2 155 aa9.43□□□□□ -0.9
CPSF1-204ENST00000529288 LYZL2Q7Z4W2 148 aa9.43□□□□□ -0.9
CPSF1-204ENST00000529288 DTD1Q8TEA8 209 aa9.43□□□□□ -0.9
CPSF1-204ENST00000529288 SCGB3A2Q96PL1 93 aa9.43□□□□□ -0.9
CPSF1-204ENST00000529288 SRRQ9GZT4 340 aa9.43□□□□□ -0.9
CPSF1-204ENST00000529288 RBKSQ9H477 322 aa9.43□□□□□ -0.9
CPSF1-204ENST00000529288 XCL2Q9UBD3 114 aa9.43□□□□□ -0.9
CPSF1-204ENST00000529288 PAIP2BQ9ULR5 123 aaKnown RBP9.43□□□□□ -0.9
CPSF1-204ENST00000529288 ELOA3CA0A087WX78 387 aaPredicted RBP9.42□□□□□ -0.9
CPSF1-204ENST00000529288 ZFP92A6NM28 416 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 C11orf94C9JXX5 98 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 FAM90A26D6RGX4 464 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 IGKV3-20P01619 116 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 PSG1P11464 419 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 SMCO1Q147U7 214 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 NMSQ5H8A3 153 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 SIGLEC15Q6ZMC9 328 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 Q6ZTC4 211 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 LGI3Q8N145 548 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 OR1S1Q8NH92 325 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 IL22RA2Q969J5 263 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 LINC00052Q96N35 136 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 SDHCQ99643 169 aaPredicted RBP9.42□□□□□ -0.9
CPSF1-204ENST00000529288 APLNQ9ULZ1 77 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 X6R8D5 127 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 DNAH10Q8IVF4 4471 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 KMT2AQ03164 3969 aa9.42□□□□□ -0.9
CPSF1-204ENST00000529288 TRAV10A0A0B4J240 114 aa9.41□□□□□ -0.9
CPSF1-204ENST00000529288 ANXA3P12429 323 aa9.41□□□□□ -0.9
CPSF1-204ENST00000529288 S100A5P33763 92 aa9.41□□□□□ -0.9
CPSF1-204ENST00000529288 CCR6P51684 374 aa9.41□□□□□ -0.9
CPSF1-204ENST00000529288 TCTAP57738 103 aa9.41□□□□□ -0.9
CPSF1-204ENST00000529288 FXYD7P58549 80 aa9.41□□□□□ -0.9
CPSF1-204ENST00000529288 NUTF2P61970 127 aaKnown RBP9.41□□□□□ -0.9
CPSF1-204ENST00000529288 PYDC2Q56P42 97 aa9.41□□□□□ -0.9
CPSF1-204ENST00000529288 GSG1LQ6UXU4 331 aa9.41□□□□□ -0.9
CPSF1-204ENST00000529288 TMED4Q7Z7H5 227 aa9.41□□□□□ -0.9
CPSF1-204ENST00000529288 PPP1R14BQ96C90 147 aa9.41□□□□□ -0.9
CPSF1-204ENST00000529288 SLC35E1Q96K37 410 aa9.41□□□□□ -0.9
CPSF1-204ENST00000529288 NRN1Q9NPD7 142 aa9.41□□□□□ -0.9
CPSF1-204ENST00000529288 CACFD1Q9UGQ2 172 aa9.41□□□□□ -0.9
CPSF1-204ENST00000529288 U3KQ87 197 aa9.41□□□□□ -0.9
CPSF1-204ENST00000529288 IGHV3OR16-12A0A075B7B8 117 aa9.4□□□□□ -0.9
CPSF1-204ENST00000529288 A0A0B4J2A0 478 aa9.4□□□□□ -0.9
CPSF1-204ENST00000529288 ZNF705EA8MWA4 302 aaPredicted RBP9.4□□□□□ -0.9
CPSF1-204ENST00000529288 BUB3O43684 328 aa9.4□□□□□ -0.9
CPSF1-204ENST00000529288 IAPPP10997 89 aa9.4□□□□□ -0.9
CPSF1-204ENST00000529288 DEFB1P60022 68 aa9.4□□□□□ -0.9
CPSF1-204ENST00000529288 LYZP61626 148 aa9.4□□□□□ -0.9
CPSF1-204ENST00000529288 ZNF90Q03938 601 aa9.4□□□□□ -0.9
CPSF1-204ENST00000529288 OR2F1Q13607 317 aa9.4□□□□□ -0.9
CPSF1-204ENST00000529288 RNF125Q96EQ8 232 aa9.4□□□□□ -0.9
CPSF1-204ENST00000529288 HRH4Q9H3N8 390 aa9.4□□□□□ -0.9
CPSF1-204ENST00000529288 NDUFA13Q9P0J0 144 aa9.4□□□□□ -0.9
CPSF1-204ENST00000529288 HSPB7Q9UBY9 170 aa9.4□□□□□ -0.9
CPSF1-204ENST00000529288 SHPKQ9UHJ6 478 aa9.4□□□□□ -0.9
CPSF1-204ENST00000529288 CELA1Q9UNI1 258 aa9.4□□□□□ -0.9
CPSF1-204ENST00000529288 IGHV4-4A0A075B6R2 117 aa9.39□□□□□ -0.91
CPSF1-204ENST00000529288 H3BMM0 161 aa9.39□□□□□ -0.91
CPSF1-204ENST00000529288 EMP1P54849 157 aa9.39□□□□□ -0.91
CPSF1-204ENST00000529288 SUPT4H1P63272 117 aaKnown RBP9.39□□□□□ -0.91
CPSF1-204ENST00000529288 BAK1Q16611 211 aa9.39□□□□□ -0.91
CPSF1-204ENST00000529288 CSNK1G2-AS1Q8NCQ2 148 aa9.39□□□□□ -0.91
CPSF1-204ENST00000529288 C1QTNF4Q9BXJ3 329 aa9.39□□□□□ -0.91
CPSF1-204ENST00000529288 PFDN2Q9UHV9 154 aa9.39□□□□□ -0.91
CPSF1-204ENST00000529288 VPS13DQ5THJ4 4388 aa9.39□□□□□ -0.91
CPSF1-204ENST00000529288 FRAS1Q86XX4 4008 aa9.38□□□□□ -0.91
CPSF1-204ENST00000529288 DEFB131BA0A096LNP1 70 aa9.38□□□□□ -0.91
CPSF1-204ENST00000529288 ID1P41134 155 aa9.38□□□□□ -0.91
CPSF1-204ENST00000529288 SRPXP78539 464 aa9.38□□□□□ -0.91
CPSF1-204ENST00000529288 GAMTQ14353 236 aa9.38□□□□□ -0.91
CPSF1-204ENST00000529288 SPANXN2Q5MJ10 180 aa9.38□□□□□ -0.91
CPSF1-204ENST00000529288 TOMM5Q8N4H5 51 aa9.38□□□□□ -0.91
CPSF1-204ENST00000529288 OR4B1Q8NGF8 309 aa9.38□□□□□ -0.91
CPSF1-204ENST00000529288 COQ8AQ8NI60 647 aa9.38□□□□□ -0.91
CPSF1-204ENST00000529288 DEDD2Q8WXF8 326 aa9.38□□□□□ -0.91
CPSF1-204ENST00000529288 A6NHS1 94 aa9.37□□□□□ -0.91
CPSF1-204ENST00000529288 SNRPGP15A8MWD9 76 aa9.37□□□□□ -0.91
CPSF1-204ENST00000529288 FABP1P07148 127 aa9.37□□□□□ -0.91
CPSF1-204ENST00000529288 VAMP1P23763 118 aa9.37□□□□□ -0.91
CPSF1-204ENST00000529288 FAUP35544 74 aaKnown RBP9.37□□□□□ -0.91
CPSF1-204ENST00000529288 GPX4P36969 197 aaPredicted RBP9.37□□□□□ -0.91
CPSF1-204ENST00000529288 NUP62P37198 522 aaPredicted RBP9.37□□□□□ -0.91
CPSF1-204ENST00000529288 NKX2-1P43699 371 aaPredicted RBP9.37□□□□□ -0.91
CPSF1-204ENST00000529288 RAB11AP62491 216 aa9.37□□□□□ -0.91
CPSF1-204ENST00000529288 C12orf74Q32Q52 190 aa9.37□□□□□ -0.91
CPSF1-204ENST00000529288 GDF5OSQ5U4N7 250 aa9.37□□□□□ -0.91
CPSF1-204ENST00000529288 KRTAP17-1Q9BYP8 105 aa9.37□□□□□ -0.91
CPSF1-204ENST00000529288 WDR12Q9GZL7 423 aaKnown RBP9.37□□□□□ -0.91
CPSF1-204ENST00000529288 IGKV1D-37A0A075B6S9 117 aa9.36□□□□□ -0.91
CPSF1-204ENST00000529288 HLA-DRB4P13762 266 aa9.36□□□□□ -0.91
CPSF1-204ENST00000529288 AP3S2P59780 193 aa9.36□□□□□ -0.91
CPSF1-204ENST00000529288 OR8G2PQ6IF36 304 aa9.36□□□□□ -0.91
CPSF1-204ENST00000529288 OR8I2Q8N0Y5 310 aa9.36□□□□□ -0.91
CPSF1-204ENST00000529288 MAGT1Q9H0U3 335 aa9.36□□□□□ -0.91
CPSF1-204ENST00000529288 SEPSECSQ9HD40 501 aaKnown RBP9.36□□□□□ -0.91
CPSF1-204ENST00000529288 HLA-DRB4X5D2U9 266 aa9.36□□□□□ -0.91
CPSF1-204ENST00000529288 WRBO00258 174 aa9.35□□□□□ -0.91
CPSF1-204ENST00000529288 BTCP35070 178 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms