RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 TMEM170AQ8WVE7 144 aa13.17□□□□□ -0.3
SSRP1-204ENST00000529002 C20orf173Q96LM9 149 aa13.17□□□□□ -0.3
SSRP1-204ENST00000529002 A0A0J9YX75 114 aa13.16□□□□□ -0.3
SSRP1-204ENST00000529002 GSTZ1O43708 216 aaPredicted RBP13.16□□□□□ -0.3
SSRP1-204ENST00000529002 TOMM40O96008 361 aa13.16□□□□□ -0.3
SSRP1-204ENST00000529002 RD3LP0DJH9 198 aa13.16□□□□□ -0.3
SSRP1-204ENST00000529002 AZU1P20160 251 aa13.16□□□□□ -0.3
SSRP1-204ENST00000529002 BTF3P20290 206 aaKnown RBP13.16□□□□□ -0.3
SSRP1-204ENST00000529002 ID1P41134 155 aa13.16□□□□□ -0.3
SSRP1-204ENST00000529002 PSMB3P49720 205 aa13.16□□□□□ -0.3
SSRP1-204ENST00000529002 PAX9P55771 341 aa13.16□□□□□ -0.3
SSRP1-204ENST00000529002 CLINT1Q14677 625 aa13.16□□□□□ -0.3
SSRP1-204ENST00000529002 SP6Q3SY56 376 aa13.16□□□□□ -0.3
SSRP1-204ENST00000529002 TMEM69Q5SWH9 247 aa13.16□□□□□ -0.3
SSRP1-204ENST00000529002 S100A16Q96FQ6 103 aaKnown RBP13.16□□□□□ -0.3
SSRP1-204ENST00000529002 ACY3Q96HD9 319 aa13.16□□□□□ -0.3
SSRP1-204ENST00000529002 C18orf15Q96N68 181 aa13.16□□□□□ -0.3
SSRP1-204ENST00000529002 PBDC1Q9BVG4 233 aa13.16□□□□□ -0.3
SSRP1-204ENST00000529002 PLAC8L1A1L4L8 177 aa13.15□□□□□ -0.3
SSRP1-204ENST00000529002 LYRM9A8MSI8 78 aa13.15□□□□□ -0.3
SSRP1-204ENST00000529002 SMR3BP02814 79 aaPredicted RBP13.15□□□□□ -0.3
SSRP1-204ENST00000529002 PGAM2P15259 253 aa13.15□□□□□ -0.3
SSRP1-204ENST00000529002 UCP3P55916 312 aa13.15□□□□□ -0.3
SSRP1-204ENST00000529002 EBLN2Q6P2I7 272 aa13.15□□□□□ -0.3
SSRP1-204ENST00000529002 AMTNQ6UX39 209 aa13.15□□□□□ -0.3
SSRP1-204ENST00000529002 SPARTQ8N0X7 666 aa13.15□□□□□ -0.3
SSRP1-204ENST00000529002 IGF2BP2-AS1Q96M15 143 aa13.15□□□□□ -0.3
SSRP1-204ENST00000529002 BLOC1S6Q9UL45 172 aa13.15□□□□□ -0.3
SSRP1-204ENST00000529002 ANKRD65E5RJM6 399 aa13.14□□□□□ -0.31
SSRP1-204ENST00000529002 SLC25A4P12235 298 aa13.14□□□□□ -0.31
SSRP1-204ENST00000529002 PRSS3P35030 304 aa13.14□□□□□ -0.31
SSRP1-204ENST00000529002 TGFBR1P36897 503 aa13.14□□□□□ -0.31
SSRP1-204ENST00000529002 FRZBQ92765 325 aa13.14□□□□□ -0.31
SSRP1-204ENST00000529002 RNF125Q96EQ8 232 aa13.14□□□□□ -0.31
SSRP1-204ENST00000529002 Q9H3A6 140 aa13.14□□□□□ -0.31
SSRP1-204ENST00000529002 HEYLQ9NQ87 328 aaPredicted RBP13.14□□□□□ -0.31
SSRP1-204ENST00000529002 ZNF586Q9NXT0 402 aa13.14□□□□□ -0.31
SSRP1-204ENST00000529002 SRRM2Q9UQ35 2752 aaKnown RBP13.13□□□□□ -0.31
SSRP1-204ENST00000529002 M0R2Z0 102 aa13.13□□□□□ -0.31
SSRP1-204ENST00000529002 CRXO43186 299 aaPredicted RBP13.13□□□□□ -0.31
SSRP1-204ENST00000529002 ATP5G1P05496 136 aa13.13□□□□□ -0.31
SSRP1-204ENST00000529002 HTR2BP41595 481 aa13.13□□□□□ -0.31
SSRP1-204ENST00000529002 ATP5G3P48201 142 aa13.13□□□□□ -0.31
SSRP1-204ENST00000529002 PIGPP57054 158 aa13.13□□□□□ -0.31
SSRP1-204ENST00000529002 SPINK13Q1W4C9 94 aa13.13□□□□□ -0.31
SSRP1-204ENST00000529002 C2orf83Q53S99 150 aa13.13□□□□□ -0.31
SSRP1-204ENST00000529002 TRIM16LQ309B1 348 aa13.12□□□□□ -0.31
SSRP1-204ENST00000529002 TTC32Q5I0X7 151 aa13.12□□□□□ -0.31
SSRP1-204ENST00000529002 UBE2NLQ5JXB2 153 aa13.12□□□□□ -0.31
SSRP1-204ENST00000529002 SAMD12Q8N8I0 201 aa13.12□□□□□ -0.31
SSRP1-204ENST00000529002 GPX8Q8TED1 209 aa13.12□□□□□ -0.31
SSRP1-204ENST00000529002 DOK5Q9P104 306 aa13.12□□□□□ -0.31
SSRP1-204ENST00000529002 C3orf85A0A1B0GTC6 90 aa13.11□□□□□ -0.31
SSRP1-204ENST00000529002 SPCS3P61009 180 aa13.11□□□□□ -0.31
SSRP1-204ENST00000529002 RND3P61587 244 aa13.11□□□□□ -0.31
SSRP1-204ENST00000529002 SPATA31B1PQ5VZV4 182 aa13.11□□□□□ -0.31
SSRP1-204ENST00000529002 BAP18Q8IXM2 172 aa13.11□□□□□ -0.31
SSRP1-204ENST00000529002 SLC24A4Q8NFF2 622 aa13.11□□□□□ -0.31
SSRP1-204ENST00000529002 OR4C16Q8NGL9 310 aa13.11□□□□□ -0.31
SSRP1-204ENST00000529002 RNASE11Q8TAA1 199 aaKnown RBP13.11□□□□□ -0.31
SSRP1-204ENST00000529002 A8MTW9 85 aa13.1□□□□□ -0.31
SSRP1-204ENST00000529002 LINC00315P59091 139 aa13.1□□□□□ -0.31
SSRP1-204ENST00000529002 KRTAP10-1P60331 282 aa13.1□□□□□ -0.31
SSRP1-204ENST00000529002 HAMPP81172 84 aa13.1□□□□□ -0.31
SSRP1-204ENST00000529002 ZNF90Q03938 601 aa13.1□□□□□ -0.31
SSRP1-204ENST00000529002 ESRGQ1W209 222 aa13.1□□□□□ -0.31
SSRP1-204ENST00000529002 Q6ZRN7 208 aaPredicted RBP13.1□□□□□ -0.31
SSRP1-204ENST00000529002 OR11H7Q8NGC8 314 aa13.1□□□□□ -0.31
SSRP1-204ENST00000529002 RNASEH2CQ8TDP1 164 aaKnown RBP13.1□□□□□ -0.31
SSRP1-204ENST00000529002 RRNAD1Q96FB5 475 aaKnown RBP13.1□□□□□ -0.31
SSRP1-204ENST00000529002 ABHD1Q96SE0 405 aa13.1□□□□□ -0.31
SSRP1-204ENST00000529002 TRAV12-2A0A075B6T6 113 aa13.09□□□□□ -0.31
SSRP1-204ENST00000529002 A0A0J9YY99 117 aa13.09□□□□□ -0.31
SSRP1-204ENST00000529002 CBY3A6NI87 242 aa13.09□□□□□ -0.31
SSRP1-204ENST00000529002 ISLRO14498 428 aa13.09□□□□□ -0.31
SSRP1-204ENST00000529002 GABARAPL2P60520 117 aa13.09□□□□□ -0.31
SSRP1-204ENST00000529002 IGFL4Q6B9Z1 124 aa13.09□□□□□ -0.31
SSRP1-204ENST00000529002 FCGR1BQ92637 280 aa13.09□□□□□ -0.31
SSRP1-204ENST00000529002 C17orf77Q96MU5 243 aa13.09□□□□□ -0.31
SSRP1-204ENST00000529002 RPRMQ9NS64 109 aa13.09□□□□□ -0.31
SSRP1-204ENST00000529002 CEBPZOSA8MTT3 80 aa13.08□□□□□ -0.32
SSRP1-204ENST00000529002 INSP01308 110 aa13.08□□□□□ -0.32
SSRP1-204ENST00000529002 PRB4P10163 310 aaPredicted RBP13.08□□□□□ -0.32
SSRP1-204ENST00000529002 RCVRNP35243 200 aa13.08□□□□□ -0.32
SSRP1-204ENST00000529002 LYZP61626 148 aa13.08□□□□□ -0.32
SSRP1-204ENST00000529002 SUPT4H1P63272 117 aaKnown RBP13.08□□□□□ -0.32
SSRP1-204ENST00000529002 OR5I1Q13606 314 aa13.08□□□□□ -0.32
SSRP1-204ENST00000529002 IZUMO2Q6UXV1 221 aa13.08□□□□□ -0.32
SSRP1-204ENST00000529002 SNX29P2Q8IUI4 249 aa13.08□□□□□ -0.32
SSRP1-204ENST00000529002 C16orf92Q96LL3 132 aa13.08□□□□□ -0.32
SSRP1-204ENST00000529002 IGKV1D-37A0A075B6S9 117 aa13.07□□□□□ -0.32
SSRP1-204ENST00000529002 TRAV26-1A0A087WT03 109 aa13.07□□□□□ -0.32
SSRP1-204ENST00000529002 ATG12O94817 140 aa13.07□□□□□ -0.32
SSRP1-204ENST00000529002 CNN1P51911 297 aaKnown RBP13.07□□□□□ -0.32
SSRP1-204ENST00000529002 OR2F1Q13607 317 aa13.07□□□□□ -0.32
SSRP1-204ENST00000529002 MEF2DQ14814 521 aa13.07□□□□□ -0.32
SSRP1-204ENST00000529002 AARDQ4LEZ3 155 aa13.07□□□□□ -0.32
SSRP1-204ENST00000529002 RNASE12Q5GAN4 147 aaKnown RBP13.07□□□□□ -0.32
SSRP1-204ENST00000529002 LHFPL5Q8TAF8 219 aa13.07□□□□□ -0.32
SSRP1-204ENST00000529002 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms