RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 C2orf83Q53S99 150 aa11.34□□□□□ -0.59
CTSB-215ENST00000528965 CCDC190Q86UF4 302 aa11.34□□□□□ -0.59
CTSB-215ENST00000528965 IL22RA2Q969J5 263 aa11.34□□□□□ -0.59
CTSB-215ENST00000528965 RBM38Q9H0Z9 239 aaKnown RBP11.34□□□□□ -0.59
CTSB-215ENST00000528965 NXPH3O95157 252 aa11.33□□□□□ -0.6
CTSB-215ENST00000528965 VAMP1P23763 118 aa11.33□□□□□ -0.6
CTSB-215ENST00000528965 KLF9Q13886 244 aaPredicted RBP11.33□□□□□ -0.6
CTSB-215ENST00000528965 MLANAQ16655 118 aa11.33□□□□□ -0.6
CTSB-215ENST00000528965 PRSS54Q6PEW0 395 aa11.33□□□□□ -0.6
CTSB-215ENST00000528965 C16orf54Q6UWD8 224 aa11.33□□□□□ -0.6
CTSB-215ENST00000528965 Q6ZTC4 211 aa11.33□□□□□ -0.6
CTSB-215ENST00000528965 OR1S1Q8NH92 325 aa11.33□□□□□ -0.6
CTSB-215ENST00000528965 GLMPQ8WWB7 406 aa11.33□□□□□ -0.6
CTSB-215ENST00000528965 DEDD2Q8WXF8 326 aa11.33□□□□□ -0.6
CTSB-215ENST00000528965 SLC25A21Q9BQT8 299 aaPredicted RBP11.33□□□□□ -0.6
CTSB-215ENST00000528965 RNF126Q9BV68 326 aa11.33□□□□□ -0.6
CTSB-215ENST00000528965 SEPSECSQ9HD40 501 aaKnown RBP11.33□□□□□ -0.6
CTSB-215ENST00000528965 PFDN2Q9UHV9 154 aa11.33□□□□□ -0.6
CTSB-215ENST00000528965 TMEM56-RWDD3S4R434 201 aa11.33□□□□□ -0.6
CTSB-215ENST00000528965 U3KQE9 123 aa11.33□□□□□ -0.6
CTSB-215ENST00000528965 V9GYH0 126 aa11.33□□□□□ -0.6
CTSB-215ENST00000528965 X6R8D5 127 aa11.33□□□□□ -0.6
CTSB-215ENST00000528965 IGHV4-4A0A075B6R2 117 aa11.32□□□□□ -0.6
CTSB-215ENST00000528965 LINC00854A0A1B0GVQ3 168 aa11.32□□□□□ -0.6
CTSB-215ENST00000528965 IL4P05112 153 aa11.32□□□□□ -0.6
CTSB-215ENST00000528965 NPY1RP25929 384 aa11.32□□□□□ -0.6
CTSB-215ENST00000528965 SIGLEC15Q6ZMC9 328 aa11.32□□□□□ -0.6
CTSB-215ENST00000528965 Q6ZRM9 215 aa11.32□□□□□ -0.6
CTSB-215ENST00000528965 LHFPL5Q8TAF8 219 aa11.32□□□□□ -0.6
CTSB-215ENST00000528965 RAB40CQ96S21 281 aa11.32□□□□□ -0.6
CTSB-215ENST00000528965 NRN1Q9NPD7 142 aa11.32□□□□□ -0.6
CTSB-215ENST00000528965 CLEC5AQ9NY25 188 aa11.32□□□□□ -0.6
CTSB-215ENST00000528965 PRR13Q9NZ81 148 aa11.32□□□□□ -0.6
CTSB-215ENST00000528965 A0A0B4J2A0 478 aa11.31□□□□□ -0.6
CTSB-215ENST00000528965 NAP1L6A6NFF2 107 aa11.31□□□□□ -0.6
CTSB-215ENST00000528965 FAM90A26D6RGX4 464 aa11.31□□□□□ -0.6
CTSB-215ENST00000528965 TOMM40O96008 361 aa11.31□□□□□ -0.6
CTSB-215ENST00000528965 IFNA10P01566 189 aa11.31□□□□□ -0.6
CTSB-215ENST00000528965 CCR6P51684 374 aa11.31□□□□□ -0.6
CTSB-215ENST00000528965 SMCO1Q147U7 214 aa11.31□□□□□ -0.6
CTSB-215ENST00000528965 TMEM128Q5BJH2 165 aa11.31□□□□□ -0.6
CTSB-215ENST00000528965 ACY3Q96HD9 319 aa11.31□□□□□ -0.6
CTSB-215ENST00000528965 SHPKQ9UHJ6 478 aa11.31□□□□□ -0.6
CTSB-215ENST00000528965 ELOA3CA0A087WX78 387 aaPredicted RBP11.3□□□□□ -0.6
CTSB-215ENST00000528965 AMBPP02760 352 aa11.3□□□□□ -0.6
CTSB-215ENST00000528965 RD3LP0DJH9 198 aa11.3□□□□□ -0.6
CTSB-215ENST00000528965 ZNF79Q15937 498 aa11.3□□□□□ -0.6
CTSB-215ENST00000528965 LYZL2Q7Z4W2 148 aa11.3□□□□□ -0.6
CTSB-215ENST00000528965 CSNK1G2-AS1Q8NCQ2 148 aa11.3□□□□□ -0.6
CTSB-215ENST00000528965 TRIM63Q969Q1 353 aa11.3□□□□□ -0.6
CTSB-215ENST00000528965 DEFB131BA0A096LNP1 70 aa11.29□□□□□ -0.6
CTSB-215ENST00000528965 USF2Q15853 346 aaPredicted RBP11.29□□□□□ -0.6
CTSB-215ENST00000528965 LINC00336Q6ZUF6 198 aa11.29□□□□□ -0.6
CTSB-215ENST00000528965 NPIPB3Q92617 1050 aa11.29□□□□□ -0.6
CTSB-215ENST00000528965 SRRQ9GZT4 340 aa11.29□□□□□ -0.6
CTSB-215ENST00000528965 PAIP2BQ9ULR5 123 aaKnown RBP11.29□□□□□ -0.6
CTSB-215ENST00000528965 AGRNO00468 2067 aa11.28□□□□□ -0.6
CTSB-215ENST00000528965 HECTD4Q9Y4D8 3996 aa11.28□□□□□ -0.6
CTSB-215ENST00000528965 DUXBA0A1W2PPF3 345 aa11.28□□□□□ -0.6
CTSB-215ENST00000528965 BUB3O43684 328 aa11.28□□□□□ -0.6
CTSB-215ENST00000528965 P0DMU3 169 aa11.28□□□□□ -0.6
CTSB-215ENST00000528965 FAM231AP0DMU4 169 aa11.28□□□□□ -0.6
CTSB-215ENST00000528965 FAM231CP0DMU5 169 aa11.28□□□□□ -0.6
CTSB-215ENST00000528965 HLA-DRB4P13762 266 aa11.28□□□□□ -0.6
CTSB-215ENST00000528965 NMSQ5H8A3 153 aa11.28□□□□□ -0.6
CTSB-215ENST00000528965 DTD1Q8TEA8 209 aa11.28□□□□□ -0.6
CTSB-215ENST00000528965 NDUFAF3Q9BU61 184 aa11.28□□□□□ -0.6
CTSB-215ENST00000528965 XCL2Q9UBD3 114 aa11.28□□□□□ -0.6
CTSB-215ENST00000528965 U3KQ87 197 aa11.28□□□□□ -0.6
CTSB-215ENST00000528965 HLA-DRB4X5D2U9 266 aa11.28□□□□□ -0.6
CTSB-215ENST00000528965 TEX48A0A1B0GUV7 120 aa11.27□□□□□ -0.61
CTSB-215ENST00000528965 TMEM189A5PLL7 270 aa11.27□□□□□ -0.61
CTSB-215ENST00000528965 H3BMM0 161 aa11.27□□□□□ -0.61
CTSB-215ENST00000528965 MED6O75586 246 aa11.27□□□□□ -0.61
CTSB-215ENST00000528965 SFT2D2O95562 160 aa11.27□□□□□ -0.61
CTSB-215ENST00000528965 FABP1P07148 127 aa11.27□□□□□ -0.61
CTSB-215ENST00000528965 ID1P41134 155 aa11.27□□□□□ -0.61
CTSB-215ENST00000528965 NKX2-1P43699 371 aaPredicted RBP11.27□□□□□ -0.61
CTSB-215ENST00000528965 SUPT4H1P63272 117 aaKnown RBP11.27□□□□□ -0.61
CTSB-215ENST00000528965 OR8G2PQ6IF36 304 aa11.27□□□□□ -0.61
CTSB-215ENST00000528965 OR51G1Q8NGK1 321 aa11.27□□□□□ -0.61
CTSB-215ENST00000528965 RNF125Q96EQ8 232 aa11.27□□□□□ -0.61
CTSB-215ENST00000528965 RBKSQ9H477 322 aa11.27□□□□□ -0.61
CTSB-215ENST00000528965 CELA1Q9UNI1 258 aa11.27□□□□□ -0.61
CTSB-215ENST00000528965 DNAH6Q9C0G6 4158 aa11.26□□□□□ -0.61
CTSB-215ENST00000528965 HOXB5P09067 269 aa11.26□□□□□ -0.61
CTSB-215ENST00000528965 PSG1P11464 419 aa11.26□□□□□ -0.61
CTSB-215ENST00000528965 ATP5IP56385 69 aaPredicted RBP11.26□□□□□ -0.61
CTSB-215ENST00000528965 RPP30P78346 268 aaKnown RBP11.26□□□□□ -0.61
CTSB-215ENST00000528965 BAK1Q16611 211 aa11.26□□□□□ -0.61
CTSB-215ENST00000528965 C12orf74Q32Q52 190 aa11.26□□□□□ -0.61
CTSB-215ENST00000528965 TMEM170AQ8WVE7 144 aa11.26□□□□□ -0.61
CTSB-215ENST00000528965 SLC35E1Q96K37 410 aa11.26□□□□□ -0.61
CTSB-215ENST00000528965 PBDC1Q9BVG4 233 aa11.26□□□□□ -0.61
CTSB-215ENST00000528965 DNAH10Q8IVF4 4471 aa11.26□□□□□ -0.61
CTSB-215ENST00000528965 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
CTSB-215ENST00000528965 ZFP92A6NM28 416 aa11.25□□□□□ -0.61
CTSB-215ENST00000528965 IFNA21P01568 189 aa11.25□□□□□ -0.61
CTSB-215ENST00000528965 RAB11AP62491 216 aa11.25□□□□□ -0.61
CTSB-215ENST00000528965 PPP1R1AQ13522 171 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms