RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 GPX4P36969 197 aaPredicted RBP7.6□□□□□ -1.19
PRPF40B-204ENST00000527253 ZNF90Q03938 601 aa7.6□□□□□ -1.19
PRPF40B-204ENST00000527253 LINC00476Q8WZB0 136 aa7.6□□□□□ -1.19
PRPF40B-204ENST00000527253 RAB40CQ96S21 281 aa7.6□□□□□ -1.19
PRPF40B-204ENST00000527253 MAGT1Q9H0U3 335 aa7.6□□□□□ -1.19
PRPF40B-204ENST00000527253 IGKV1OR2-108A0A075B7D4 117 aa7.59□□□□□ -1.19
PRPF40B-204ENST00000527253 HELTA6NFD8 242 aa7.59□□□□□ -1.19
PRPF40B-204ENST00000527253 FAM90A26D6RGX4 464 aa7.59□□□□□ -1.19
PRPF40B-204ENST00000527253 PRSS46E5RG02 174 aa7.59□□□□□ -1.19
PRPF40B-204ENST00000527253 HOXB5P09067 269 aa7.59□□□□□ -1.19
PRPF40B-204ENST00000527253 SLC25A6P12236 298 aa7.59□□□□□ -1.19
PRPF40B-204ENST00000527253 ATP5IP56385 69 aaPredicted RBP7.59□□□□□ -1.19
PRPF40B-204ENST00000527253 NANOS2P60321 138 aaKnown RBP7.59□□□□□ -1.19
PRPF40B-204ENST00000527253 PSMG4Q5JS54 123 aa7.59□□□□□ -1.19
PRPF40B-204ENST00000527253 ACTL10Q5JWF8 245 aa7.59□□□□□ -1.19
PRPF40B-204ENST00000527253 GGNBP1Q5YKI7 109 aa7.59□□□□□ -1.19
PRPF40B-204ENST00000527253 STHQ8IWL8 128 aa7.59□□□□□ -1.19
PRPF40B-204ENST00000527253 DEDD2Q8WXF8 326 aa7.59□□□□□ -1.19
PRPF40B-204ENST00000527253 NARS2Q96I59 477 aaKnown RBP7.59□□□□□ -1.19
PRPF40B-204ENST00000527253 FLVCR2Q9UPI3 526 aa7.59□□□□□ -1.19
PRPF40B-204ENST00000527253 C9orf170A2RU37 121 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 NUPR2A6NF83 97 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 ADAP1O75689 374 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 NDUFB6O95139 128 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 RBMY1A1P0DJD3 496 aaKnown RBP7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 RBMY1CP0DJD4 496 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 BTCP35070 178 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 EIF2B2P49770 351 aaKnown RBP7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 DEFB1P60022 68 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 OR2F1Q13607 317 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 RBMY1FQ15415 496 aaKnown RBP7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 SPANXN2Q5MJ10 180 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 CENPSQ8N2Z9 138 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 TMEM217Q8N7C4 229 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 Q8NAQ8 132 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 CSNK1G2-AS1Q8NCQ2 148 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 PHLDA1Q8WV24 401 aaPredicted RBP7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 RNF125Q96EQ8 232 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 SLC35E1Q96K37 410 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 C11orf68Q9H3H3 251 aaKnown RBP7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 CLEC5AQ9NY25 188 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 TMED3Q9Y3Q3 217 aa7.58□□□□□ -1.2
PRPF40B-204ENST00000527253 LINC00854A0A1B0GVQ3 168 aa7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 ZFP92A6NM28 416 aa7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 WRBO00258 174 aa7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 SYNGR2O43760 224 aa7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 LY6G6CO95867 125 aa7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 AP2S1P53680 142 aaPredicted RBP7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 ID3Q02535 119 aa7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 MORN3Q6PF18 240 aaPredicted RBP7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 SIGLEC15Q6ZMC9 328 aa7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 TMEM182Q6ZP80 229 aaPredicted RBP7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 THAP8Q8NA92 274 aa7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 C11orf45Q8TAV5 145 aa7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 C17orf77Q96MU5 243 aa7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 TRGV9Q99603 122 aa7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 PBDC1Q9BVG4 233 aa7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 WDR12Q9GZL7 423 aaKnown RBP7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 NRN1Q9NPD7 142 aa7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 PAIP2BQ9ULR5 123 aaKnown RBP7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 X6R8D5 127 aa7.57□□□□□ -1.2
PRPF40B-204ENST00000527253 IGHV4-28A0A0C4DH34 117 aa7.56□□□□□ -1.2
PRPF40B-204ENST00000527253 NAP1L6A6NFF2 107 aa7.56□□□□□ -1.2
PRPF40B-204ENST00000527253 ZNF705EA8MWA4 302 aaPredicted RBP7.56□□□□□ -1.2
PRPF40B-204ENST00000527253 H3BMM0 161 aa7.56□□□□□ -1.2
PRPF40B-204ENST00000527253 SOCS3O14543 225 aa7.56□□□□□ -1.2
PRPF40B-204ENST00000527253 MED6O75586 246 aa7.56□□□□□ -1.2
PRPF40B-204ENST00000527253 SPP1P10451 314 aa7.56□□□□□ -1.2
PRPF40B-204ENST00000527253 LYZP61626 148 aa7.56□□□□□ -1.2
PRPF40B-204ENST00000527253 OR8G2PQ6IF36 304 aa7.56□□□□□ -1.2
PRPF40B-204ENST00000527253 SEPSECSQ9HD40 501 aaKnown RBP7.56□□□□□ -1.2
PRPF40B-204ENST00000527253 FBXL17Q9UF56 701 aa7.56□□□□□ -1.2
PRPF40B-204ENST00000527253 ELOA3CA0A087WX78 387 aaPredicted RBP7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 PIGBOS1A0A0B4J2F0 54 aa7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 SNRPGP15A8MWD9 76 aa7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 H3BP45 60 aa7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 OR4E1P0C645 316 aa7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 ANXA7P20073 488 aaKnown RBP7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 GATA2P23769 480 aaPredicted RBP7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 UBE2MP61081 183 aaKnown RBP7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 POLR2GP62487 172 aaKnown RBP eCLIP7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 RAB11AP62491 216 aa7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 SPANXN5Q5MJ07 72 aa7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 GDF5OSQ5U4N7 250 aa7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 TRIQKQ629K1 86 aa7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 OR4D5Q8NGN0 318 aa7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 CIB3Q96Q77 187 aaPredicted RBP7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 KLK5Q9Y337 293 aaPredicted RBP7.55□□□□□ -1.2
PRPF40B-204ENST00000527253 PMS2P5A8MQ11 134 aa7.54□□□□□ -1.2
PRPF40B-204ENST00000527253 PLA2G10O15496 165 aa7.54□□□□□ -1.2
PRPF40B-204ENST00000527253 CCNKO75909 580 aa7.54□□□□□ -1.2
PRPF40B-204ENST00000527253 IL7P13232 177 aa7.54□□□□□ -1.2
PRPF40B-204ENST00000527253 NKX2-1P43699 371 aaPredicted RBP7.54□□□□□ -1.2
PRPF40B-204ENST00000527253 PAX9P55771 341 aa7.54□□□□□ -1.2
PRPF40B-204ENST00000527253 SNRPD3P62318 126 aaKnown RBP7.54□□□□□ -1.2
PRPF40B-204ENST00000527253 TMEM41BQ5BJD5 291 aa7.54□□□□□ -1.2
PRPF40B-204ENST00000527253 C1orf194Q5T5A4 169 aa7.54□□□□□ -1.2
PRPF40B-204ENST00000527253 FABP1P07148 127 aa7.53□□□□□ -1.2
PRPF40B-204ENST00000527253 HLA-DRB4P13762 266 aa7.53□□□□□ -1.2
PRPF40B-204ENST00000527253 MIFP14174 115 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms