RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 Q8WTZ3 238 aa12.56□□□□□ -0.4
SMCO4-204ENST00000527149 GINS3Q9BRX5 216 aa12.56□□□□□ -0.4
SMCO4-204ENST00000527149 SLC25A31Q9H0C2 315 aa12.56□□□□□ -0.4
SMCO4-204ENST00000527149 SMPXQ9UHP9 88 aa12.56□□□□□ -0.4
SMCO4-204ENST00000527149 DNAH9Q9NYC9 4486 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 WI2-2373I1.2A0A1W2PRP0 233 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 APOHP02749 345 aaPredicted RBP12.55□□□□□ -0.4
SMCO4-204ENST00000527149 IL4P05112 153 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 CRYBB3P26998 211 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 S100A11P31949 105 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 OR51G1Q8NGK1 321 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 OR2K2Q8NGT1 345 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 OR2T35Q8NGX2 323 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 DYNLRB2Q8TF09 96 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 RNF125Q96EQ8 232 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 TMEM147Q9BVK8 224 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 VSIRQ9H7M9 311 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 NPVFQ9HCQ7 196 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 UQCC1Q9NVA1 299 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 TECRQ9NZ01 308 aaKnown RBP12.55□□□□□ -0.4
SMCO4-204ENST00000527149 WDR83OSQ9Y284 106 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 SELENOKQ9Y6D0 94 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 U3KQE9 123 aa12.55□□□□□ -0.4
SMCO4-204ENST00000527149 IGHV3-49A0A0A0MS15 119 aa12.54□□□□□ -0.4
SMCO4-204ENST00000527149 CHEK1O14757 476 aa12.54□□□□□ -0.4
SMCO4-204ENST00000527149 PRB2P02812 416 aaPredicted RBP12.54□□□□□ -0.4
SMCO4-204ENST00000527149 GATA2P23769 480 aaPredicted RBP12.54□□□□□ -0.4
SMCO4-204ENST00000527149 HBG1P69891 147 aa12.54□□□□□ -0.4
SMCO4-204ENST00000527149 HBG2P69892 147 aa12.54□□□□□ -0.4
SMCO4-204ENST00000527149 OR2F1Q13607 317 aa12.54□□□□□ -0.4
SMCO4-204ENST00000527149 TMEM61Q8N0U2 210 aa12.54□□□□□ -0.4
SMCO4-204ENST00000527149 OR5C1Q8NGR4 320 aa12.54□□□□□ -0.4
SMCO4-204ENST00000527149 HSPB11Q9Y547 144 aa12.54□□□□□ -0.4
SMCO4-204ENST00000527149 IGHV3OR16-13A0A075B7E8 117 aa12.53□□□□□ -0.4
SMCO4-204ENST00000527149 IGHV3-74A0A0B4J1X5 117 aa12.53□□□□□ -0.4
SMCO4-204ENST00000527149 FABP1P07148 127 aa12.53□□□□□ -0.4
SMCO4-204ENST00000527149 RPL12P30050 165 aaKnown RBP12.53□□□□□ -0.4
SMCO4-204ENST00000527149 TEPPQ6URK8 271 aa12.53□□□□□ -0.4
SMCO4-204ENST00000527149 CYP2G1PQ6ZSU1 146 aa12.53□□□□□ -0.4
SMCO4-204ENST00000527149 LILRB2Q8N423 598 aa12.53□□□□□ -0.4
SMCO4-204ENST00000527149 STPG3Q8N7X2 389 aa12.53□□□□□ -0.4
SMCO4-204ENST00000527149 THAP6Q8TBB0 222 aa12.53□□□□□ -0.4
SMCO4-204ENST00000527149 ST8SIA2Q92186 375 aa12.53□□□□□ -0.4
SMCO4-204ENST00000527149 METTL26Q96S19 204 aa12.53□□□□□ -0.4
SMCO4-204ENST00000527149 MGST2Q99735 147 aa12.53□□□□□ -0.4
SMCO4-204ENST00000527149 RHPN1-AS1Q9BWJ2 59 aa12.53□□□□□ -0.4
SMCO4-204ENST00000527149 AURKAIP1Q9NWT8 199 aaPredicted RBP12.53□□□□□ -0.4
SMCO4-204ENST00000527149 ZNF256Q9Y2P7 627 aaPredicted RBP12.53□□□□□ -0.4
SMCO4-204ENST00000527149 UBE2L5PA0A1B0GUS4 154 aa12.52□□□□□ -0.41
SMCO4-204ENST00000527149 FGL1Q08830 312 aa12.52□□□□□ -0.41
SMCO4-204ENST00000527149 ATP6V1FQ16864 119 aa12.52□□□□□ -0.41
SMCO4-204ENST00000527149 FAM90A2PQ658T7 463 aa12.52□□□□□ -0.41
SMCO4-204ENST00000527149 LCN12Q6JVE5 192 aa12.52□□□□□ -0.41
SMCO4-204ENST00000527149 RNF2Q99496 336 aa12.52□□□□□ -0.41
SMCO4-204ENST00000527149 SLC45A2Q9UMX9 530 aa12.52□□□□□ -0.41
SMCO4-204ENST00000527149 RNF222A6NCQ9 220 aa12.51□□□□□ -0.41
SMCO4-204ENST00000527149 ZNF785A8K8V0 405 aa12.51□□□□□ -0.41
SMCO4-204ENST00000527149 AGPAT2O15120 278 aa12.51□□□□□ -0.41
SMCO4-204ENST00000527149 LYZP61626 148 aa12.51□□□□□ -0.41
SMCO4-204ENST00000527149 CLINT1Q14677 625 aa12.51□□□□□ -0.41
SMCO4-204ENST00000527149 AQP10Q96PS8 301 aa12.51□□□□□ -0.41
SMCO4-204ENST00000527149 PRR25Q96S07 402 aa12.51□□□□□ -0.41
SMCO4-204ENST00000527149 GGTLC1Q9BX51 225 aa12.51□□□□□ -0.41
SMCO4-204ENST00000527149 TRAV25A0A0B4J276 109 aa12.5□□□□□ -0.41
SMCO4-204ENST00000527149 IGHV3-66A0A0C4DH42 116 aa12.5□□□□□ -0.41
SMCO4-204ENST00000527149 SMLR1H3BR10 107 aa12.5□□□□□ -0.41
SMCO4-204ENST00000527149 CFDP00746 253 aaPredicted RBP12.5□□□□□ -0.41
SMCO4-204ENST00000527149 HNRNPCP07910 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMCO4-204ENST00000527149 GP9P14770 177 aa12.5□□□□□ -0.41
SMCO4-204ENST00000527149 NPPCP23582 126 aa12.5□□□□□ -0.41
SMCO4-204ENST00000527149 PLP1P60201 277 aa12.5□□□□□ -0.41
SMCO4-204ENST00000527149 SELENOTP62341 195 aa12.5□□□□□ -0.41
SMCO4-204ENST00000527149 DEFA6Q01524 100 aa12.5□□□□□ -0.41
SMCO4-204ENST00000527149 OPCMLQ14982 345 aa12.5□□□□□ -0.41
SMCO4-204ENST00000527149 ZNF546Q86UE3 836 aa12.5□□□□□ -0.41
SMCO4-204ENST00000527149 BPIFCQ8NFQ6 507 aa12.5□□□□□ -0.41
SMCO4-204ENST00000527149 GLMPQ8WWB7 406 aa12.5□□□□□ -0.41
SMCO4-204ENST00000527149 PBDC1Q9BVG4 233 aa12.5□□□□□ -0.41
SMCO4-204ENST00000527149 ZMAT5Q9UDW3 170 aaKnown RBP12.5□□□□□ -0.41
SMCO4-204ENST00000527149 RABAC1Q9UI14 185 aa12.5□□□□□ -0.41
SMCO4-204ENST00000527149 K7EIL1 84 aa12.49□□□□□ -0.41
SMCO4-204ENST00000527149 TSPAN4O14817 238 aa12.49□□□□□ -0.41
SMCO4-204ENST00000527149 BUB3O43684 328 aa12.49□□□□□ -0.41
SMCO4-204ENST00000527149 LINC00869P0C866 280 aa12.49□□□□□ -0.41
SMCO4-204ENST00000527149 EIF2B2P49770 351 aaKnown RBP12.49□□□□□ -0.41
SMCO4-204ENST00000527149 PRR20EP86478 221 aa12.49□□□□□ -0.41
SMCO4-204ENST00000527149 PRR20CP86479 221 aa12.49□□□□□ -0.41
SMCO4-204ENST00000527149 PRR20DP86480 221 aa12.49□□□□□ -0.41
SMCO4-204ENST00000527149 PRR20BP86481 221 aa12.49□□□□□ -0.41
SMCO4-204ENST00000527149 PRR20AP86496 221 aa12.49□□□□□ -0.41
SMCO4-204ENST00000527149 ST6GAL2Q96JF0 529 aa12.49□□□□□ -0.41
SMCO4-204ENST00000527149 ATP5SQ99766 215 aa12.49□□□□□ -0.41
SMCO4-204ENST00000527149 WFDC1Q9HC57 220 aa12.49□□□□□ -0.41
SMCO4-204ENST00000527149 TNFSF18Q9UNG2 199 aa12.49□□□□□ -0.41
SMCO4-204ENST00000527149 FXYD6-FXYD2A0A087WZ82 144 aa12.48□□□□□ -0.41
SMCO4-204ENST00000527149 FGF7P21781 194 aa12.48□□□□□ -0.41
SMCO4-204ENST00000527149 CAMLGP49069 296 aa12.48□□□□□ -0.41
SMCO4-204ENST00000527149 C16orf54Q6UWD8 224 aa12.48□□□□□ -0.41
SMCO4-204ENST00000527149 NPCDR1Q9BY65 106 aa12.48□□□□□ -0.41
SMCO4-204ENST00000527149 SMIM3Q9BZL3 60 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms