RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 RER1O15258 196 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 LDB3O75112 727 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 TMEM50AO95807 157 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 CA2P00918 260 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 TTRP02766 147 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 SERPINE2P07093 398 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 FAM90A15PP0C7V4 464 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 FAM90A14PP0C7W9 464 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 FABP6P51161 128 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 CTXN1P60606 82 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 CX3CL1P78423 397 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 ID2Q02363 134 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 TGFBR3Q03167 851 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 ZP4Q12836 540 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 UNC119Q13432 240 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 KLF5Q13887 457 aaPredicted RBP4.11□□□□□ -1.75
CD44-218ENST00000525469 RNPS1Q15287 305 aaKnown RBP4.11□□□□□ -1.75
CD44-218ENST00000525469 ZNF672Q499Z4 452 aaPredicted RBP4.11□□□□□ -1.75
CD44-218ENST00000525469 DGAT2L7PQ6IED9 249 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 SLC25A47Q6Q0C1 308 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 LCN15Q6UWW0 184 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 ASCL4Q6XD76 172 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 Q6ZS49 121 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 ATP5L2Q7Z4Y8 100 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 PRR22Q8IZ63 422 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 ZNF525Q8N782 197 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 ZNF645Q8N7E2 425 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 Q8N976 141 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 ZNF439Q8NDP4 499 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 ZNF740Q8NDX6 193 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 OR5D13Q8NGL4 314 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 OR10G7Q8NGN6 311 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 OR10AC1Q8NH08 325 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 OR4A5Q8NH83 315 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 OR9G1Q8NH87 305 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 TM4SF19Q96DZ7 209 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 ANAPC13Q9BS18 74 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 SLC25A33Q9BSK2 321 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 MLST8Q9BVC4 326 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 GTSF1LQ9H1H1 148 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 PRTFDC1Q9NRG1 225 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 PROCRQ9UNN8 238 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 MUC21A0A0G2JKD1 596 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 MUC21A0A140T8X8 626 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 TEX50A0A1B0GTY4 177 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 GAGE12JA6NER3 117 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 FAM24AA6NFZ4 105 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 OOEPA6NGQ2 149 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 OR4C46A6NHA9 309 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 FAM90A20PA6NIJ5 464 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 ZNF850A8MQ14 1090 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 XRCC2O43543 280 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 SYNGR1O43759 233 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 SSSCA1O60232 199 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 SLC16A7O60669 478 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 FOXH1O75593 365 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 GAGE7O76087 117 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 IGHMP01871 453 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 APOA2P02652 100 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 GRPP07492 148 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 GAGE12FP0CL80 117 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 GAGE12GP0CL81 117 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 GAGE12IP0CL82 117 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 SMIM13P0DJ93 91 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 CT45A10P0DMU9 189 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 COX8AP10176 69 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 IGLL1P15814 213 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 ZNF17P17021 662 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 KIR2DS4P43632 304 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 HERV-K104P63124 156 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 SLC35B1P78383 322 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 PLCXD2Q0VAA5 305 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 GAGE4Q13068 117 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 FHL1Q13642 323 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 ZNF141Q15928 474 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 BEAN1Q3B7T3 259 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 MUC21Q5SSG8 566 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 ZFAND6Q6FIF0 208 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 GLIPR1L1Q6UWM5 242 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 TMEM136Q6ZRR5 245 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 SPATA12Q7Z6I5 190 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 YRDCQ86U90 279 aaKnown RBP4.1□□□□□ -1.75
CD44-218ENST00000525469 TEX29Q8N6K0 151 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 OR1L1Q8NH94 360 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 C10orf105Q8TEF2 133 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 ZNRF4Q8WWF5 429 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 CNRIP1Q96F85 164 aaPredicted RBP4.1□□□□□ -1.75
CD44-218ENST00000525469 PIMREGQ9BSJ6 248 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 FAM103A1Q9BTL3 118 aaKnown RBP4.1□□□□□ -1.75
CD44-218ENST00000525469 ST6GALNAC5Q9BVH7 336 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 HINT2Q9BX68 163 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 C1QTNF4Q9BXJ3 329 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 RSPO3Q9BXY4 272 aaPredicted RBP4.1□□□□□ -1.75
CD44-218ENST00000525469 TTTY10Q9BZA0 68 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 NPVFQ9HCQ7 196 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 OSTCQ9NRP0 149 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.1□□□□□ -1.75
CD44-218ENST00000525469 CLCF1Q9UBD9 225 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 PLCE1Q9P212 2302 aa4.1□□□□□ -1.75
CD44-218ENST00000525469 ARFGEF3Q5TH69 2177 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms