RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 FAM90A26D6RGX4 464 aa13.61□□□□□ -0.23
CAPN1-203ENST00000525013 MED6O75586 246 aa13.61□□□□□ -0.23
CAPN1-203ENST00000525013 SLC25A6P12236 298 aa13.61□□□□□ -0.23
CAPN1-203ENST00000525013 GAMTQ14353 236 aa13.61□□□□□ -0.23
CAPN1-203ENST00000525013 BAK1Q16611 211 aa13.61□□□□□ -0.23
CAPN1-203ENST00000525013 OR11H2Q8NH07 326 aa13.61□□□□□ -0.23
CAPN1-203ENST00000525013 GLMPQ8WWB7 406 aa13.61□□□□□ -0.23
CAPN1-203ENST00000525013 PBDC1Q9BVG4 233 aa13.61□□□□□ -0.23
CAPN1-203ENST00000525013 NAP1L6A6NFF2 107 aa13.6□□□□□ -0.23
CAPN1-203ENST00000525013 KNCNA6PVL3 124 aa13.6□□□□□ -0.23
CAPN1-203ENST00000525013 RNF125Q96EQ8 232 aa13.6□□□□□ -0.23
CAPN1-203ENST00000525013 WRBO00258 174 aa13.59□□□□□ -0.23
CAPN1-203ENST00000525013 UBE2MP61081 183 aaKnown RBP13.59□□□□□ -0.23
CAPN1-203ENST00000525013 ZNF90Q03938 601 aa13.59□□□□□ -0.23
CAPN1-203ENST00000525013 GGNBP1Q5YKI7 109 aa13.59□□□□□ -0.23
CAPN1-203ENST00000525013 SIGLEC15Q6ZMC9 328 aa13.59□□□□□ -0.23
CAPN1-203ENST00000525013 CIB3Q96Q77 187 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-203ENST00000525013 PFDN2Q9UHV9 154 aa13.59□□□□□ -0.23
CAPN1-203ENST00000525013 NUPR2A6NF83 97 aa13.58□□□□□ -0.24
CAPN1-203ENST00000525013 BUB3O43684 328 aa13.58□□□□□ -0.24
CAPN1-203ENST00000525013 SYNGR2O43760 224 aa13.58□□□□□ -0.24
CAPN1-203ENST00000525013 NDUFB6O95139 128 aa13.58□□□□□ -0.24
CAPN1-203ENST00000525013 FABP1P07148 127 aa13.58□□□□□ -0.24
CAPN1-203ENST00000525013 ATF4P18848 351 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-203ENST00000525013 RPP30P78346 268 aaKnown RBP13.58□□□□□ -0.24
CAPN1-203ENST00000525013 PSMG4Q5JS54 123 aa13.58□□□□□ -0.24
CAPN1-203ENST00000525013 ACTL10Q5JWF8 245 aa13.58□□□□□ -0.24
CAPN1-203ENST00000525013 FLVCR2Q9UPI3 526 aa13.58□□□□□ -0.24
CAPN1-203ENST00000525013 IGKV1D-37A0A075B6S9 117 aa13.57□□□□□ -0.24
CAPN1-203ENST00000525013 C9orf170A2RU37 121 aa13.57□□□□□ -0.24
CAPN1-203ENST00000525013 CENPXA8MT69 81 aa13.57□□□□□ -0.24
CAPN1-203ENST00000525013 NUP62P37198 522 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-203ENST00000525013 LYZP61626 148 aa13.57□□□□□ -0.24
CAPN1-203ENST00000525013 OR2F1Q13607 317 aa13.57□□□□□ -0.24
CAPN1-203ENST00000525013 TRPT1Q86TN4 253 aaKnown RBP13.57□□□□□ -0.24
CAPN1-203ENST00000525013 NRN1Q9NPD7 142 aa13.57□□□□□ -0.24
CAPN1-203ENST00000525013 SNRPGP15A8MWD9 76 aa13.56□□□□□ -0.24
CAPN1-203ENST00000525013 ADAP1O75689 374 aa13.56□□□□□ -0.24
CAPN1-203ENST00000525013 SNRPD3P62318 126 aaKnown RBP13.56□□□□□ -0.24
CAPN1-203ENST00000525013 SPANXN5Q5MJ07 72 aa13.56□□□□□ -0.24
CAPN1-203ENST00000525013 CEMP1Q6PRD7 247 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-203ENST00000525013 COQ8AQ8NI60 647 aa13.56□□□□□ -0.24
CAPN1-203ENST00000525013 PPP1R14BQ96C90 147 aa13.56□□□□□ -0.24
CAPN1-203ENST00000525013 SDHCQ99643 169 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-203ENST00000525013 DNAH1Q9P2D7 4330 aa13.56□□□□□ -0.24
CAPN1-203ENST00000525013 DEFB4AO15263 64 aa13.55□□□□□ -0.24
CAPN1-203ENST00000525013 SPP1P10451 314 aa13.55□□□□□ -0.24
CAPN1-203ENST00000525013 C4orf46Q504U0 113 aa13.55□□□□□ -0.24
CAPN1-203ENST00000525013 OR8G2PQ6IF36 304 aa13.55□□□□□ -0.24
CAPN1-203ENST00000525013 MORN3Q6PF18 240 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-203ENST00000525013 RAB40CQ96S21 281 aa13.55□□□□□ -0.24
CAPN1-203ENST00000525013 TRGV9Q99603 122 aa13.55□□□□□ -0.24
CAPN1-203ENST00000525013 KLK5Q9Y337 293 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-203ENST00000525013 H3BP45 60 aa13.54□□□□□ -0.24
CAPN1-203ENST00000525013 IFNA21P01568 189 aa13.54□□□□□ -0.24
CAPN1-203ENST00000525013 OR4E1P0C645 316 aa13.54□□□□□ -0.24
CAPN1-203ENST00000525013 ANXA7P20073 488 aaKnown RBP13.54□□□□□ -0.24
CAPN1-203ENST00000525013 STRAPQ9Y3F4 350 aaKnown RBP13.54□□□□□ -0.24
CAPN1-203ENST00000525013 PLECQ15149 4684 aaKnown RBP13.53□□□□□ -0.24
CAPN1-203ENST00000525013 GIG44P09565 113 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-203ENST00000525013 IL7P13232 177 aa13.53□□□□□ -0.24
CAPN1-203ENST00000525013 TMEM41BQ5BJD5 291 aa13.53□□□□□ -0.24
CAPN1-203ENST00000525013 THAP8Q8NA92 274 aa13.53□□□□□ -0.24
CAPN1-203ENST00000525013 C11orf45Q8TAV5 145 aa13.53□□□□□ -0.24
CAPN1-203ENST00000525013 PHLDA1Q8WV24 401 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-203ENST00000525013 C7orf50Q9BRJ6 194 aaKnown RBP13.53□□□□□ -0.24
CAPN1-203ENST00000525013 C11orf68Q9H3H3 251 aaKnown RBP13.53□□□□□ -0.24
CAPN1-203ENST00000525013 NDUFA13Q9P0J0 144 aa13.53□□□□□ -0.24
CAPN1-203ENST00000525013 ALMS1Q8TCU4 4167 aa13.53□□□□□ -0.24
CAPN1-203ENST00000525013 IGKV1OR2-108A0A075B7D4 117 aa13.52□□□□□ -0.25
CAPN1-203ENST00000525013 C4BPBP20851 252 aa13.52□□□□□ -0.25
CAPN1-203ENST00000525013 BTCP35070 178 aa13.52□□□□□ -0.25
CAPN1-203ENST00000525013 NKX2-1P43699 371 aaPredicted RBP13.52□□□□□ -0.25
CAPN1-203ENST00000525013 NANOS2P60321 138 aaKnown RBP13.52□□□□□ -0.25
CAPN1-203ENST00000525013 POLR2GP62487 172 aaKnown RBP eCLIP13.52□□□□□ -0.25
CAPN1-203ENST00000525013 AKR1C1Q04828 323 aa13.52□□□□□ -0.25
CAPN1-203ENST00000525013 SEPSECSQ9HD40 501 aaKnown RBP13.52□□□□□ -0.25
CAPN1-203ENST00000525013 CLEC5AQ9NY25 188 aa13.52□□□□□ -0.25
CAPN1-203ENST00000525013 FBXL17Q9UF56 701 aa13.52□□□□□ -0.25
CAPN1-203ENST00000525013 SSSCA1O60232 199 aa13.51□□□□□ -0.25
CAPN1-203ENST00000525013 LY6G6CO95867 125 aa13.51□□□□□ -0.25
CAPN1-203ENST00000525013 ID3Q02535 119 aa13.51□□□□□ -0.25
CAPN1-203ENST00000525013 C1orf194Q5T5A4 169 aa13.51□□□□□ -0.25
CAPN1-203ENST00000525013 OR8I2Q8N0Y5 310 aa13.51□□□□□ -0.25
CAPN1-203ENST00000525013 LINC00476Q8WZB0 136 aa13.51□□□□□ -0.25
CAPN1-203ENST00000525013 LINC00052Q96N35 136 aa13.51□□□□□ -0.25
CAPN1-203ENST00000525013 MFFQ9GZY8 342 aa13.51□□□□□ -0.25
CAPN1-203ENST00000525013 PSENENQ9NZ42 101 aa13.51□□□□□ -0.25
CAPN1-203ENST00000525013 PRSS46E5RG02 174 aa13.5□□□□□ -0.25
CAPN1-203ENST00000525013 CFDP00746 253 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-203ENST00000525013 ID1P41134 155 aa13.5□□□□□ -0.25
CAPN1-203ENST00000525013 ACOT7LQ6ZUV0 252 aa13.5□□□□□ -0.25
CAPN1-203ENST00000525013 WDR12Q9GZL7 423 aaKnown RBP13.5□□□□□ -0.25
CAPN1-203ENST00000525013 HYDINQ4G0P3 5121 aa13.5□□□□□ -0.25
CAPN1-203ENST00000525013 SMCO3A2RU48 225 aa13.49□□□□□ -0.25
CAPN1-203ENST00000525013 SCGB1D2O95969 90 aa13.49□□□□□ -0.25
CAPN1-203ENST00000525013 NUTF2P61970 127 aaKnown RBP13.49□□□□□ -0.25
CAPN1-203ENST00000525013 BPIFCQ8NFQ6 507 aa13.49□□□□□ -0.25
CAPN1-203ENST00000525013 OR4D5Q8NGN0 318 aa13.49□□□□□ -0.25
CAPN1-203ENST00000525013 IGHV4-28A0A0C4DH34 117 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms