RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 FAM24AA6NFZ4 105 aa13.35□□□□□ -0.27
PACSIN3-202ENST00000524509 CXCL3P19876 107 aa13.35□□□□□ -0.27
PACSIN3-202ENST00000524509 SLC38A11Q08AI6 406 aa13.35□□□□□ -0.27
PACSIN3-202ENST00000524509 TEPPQ6URK8 271 aa13.35□□□□□ -0.27
PACSIN3-202ENST00000524509 OR11H7Q8NGC8 314 aa13.35□□□□□ -0.27
PACSIN3-202ENST00000524509 TM4SF20Q53R12 229 aa13.34□□□□□ -0.27
PACSIN3-202ENST00000524509 BPIFCQ8NFQ6 507 aa13.34□□□□□ -0.27
PACSIN3-202ENST00000524509 GRAMD2BQ96HH9 432 aa13.34□□□□□ -0.27
PACSIN3-202ENST00000524509 UQCC1Q9NVA1 299 aa13.34□□□□□ -0.27
PACSIN3-202ENST00000524509 RNF24Q9Y225 148 aa13.34□□□□□ -0.27
PACSIN3-202ENST00000524509 CST7O76096 145 aa13.33□□□□□ -0.28
PACSIN3-202ENST00000524509 PSG1P11464 419 aa13.33□□□□□ -0.28
PACSIN3-202ENST00000524509 EIF2B2P49770 351 aaKnown RBP13.33□□□□□ -0.28
PACSIN3-202ENST00000524509 DEFB114Q30KQ6 69 aa13.33□□□□□ -0.28
PACSIN3-202ENST00000524509 TMEM217Q8N7C4 229 aa13.33□□□□□ -0.28
PACSIN3-202ENST00000524509 WWC2-AS2Q96NR7 200 aa13.33□□□□□ -0.28
PACSIN3-202ENST00000524509 TMEM147Q9BVK8 224 aa13.33□□□□□ -0.28
PACSIN3-202ENST00000524509 OR5AC2Q9NZP5 309 aa13.33□□□□□ -0.28
PACSIN3-202ENST00000524509 SMPXQ9UHP9 88 aa13.33□□□□□ -0.28
PACSIN3-202ENST00000524509 ZNF256Q9Y2P7 627 aaPredicted RBP13.33□□□□□ -0.28
PACSIN3-202ENST00000524509 IGHV7-4-1A0A0J9YVY3 117 aa13.32□□□□□ -0.28
PACSIN3-202ENST00000524509 K7EIL1 84 aa13.32□□□□□ -0.28
PACSIN3-202ENST00000524509 MPDU1O75352 247 aa13.32□□□□□ -0.28
PACSIN3-202ENST00000524509 IL4P05112 153 aa13.32□□□□□ -0.28
PACSIN3-202ENST00000524509 LYL1P12980 280 aa13.32□□□□□ -0.28
PACSIN3-202ENST00000524509 PXDC1Q5TGL8 231 aa13.32□□□□□ -0.28
PACSIN3-202ENST00000524509 RBPMS2Q6ZRY4 209 aaKnown RBP13.32□□□□□ -0.28
PACSIN3-202ENST00000524509 RNF126Q9BV68 326 aa13.32□□□□□ -0.28
PACSIN3-202ENST00000524509 ZFAND3Q9H8U3 227 aa13.32□□□□□ -0.28
PACSIN3-202ENST00000524509 RABAC1Q9UI14 185 aa13.32□□□□□ -0.28
PACSIN3-202ENST00000524509 SLC45A2Q9UMX9 530 aa13.32□□□□□ -0.28
PACSIN3-202ENST00000524509 DNAH9Q9NYC9 4486 aa13.31□□□□□ -0.28
PACSIN3-202ENST00000524509 H0YIZ8 118 aa13.31□□□□□ -0.28
PACSIN3-202ENST00000524509 DFFBO76075 338 aa13.31□□□□□ -0.28
PACSIN3-202ENST00000524509 HNRNPCP07910 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
PACSIN3-202ENST00000524509 CRYBB3P26998 211 aa13.31□□□□□ -0.28
PACSIN3-202ENST00000524509 RPL12P30050 165 aaKnown RBP13.31□□□□□ -0.28
PACSIN3-202ENST00000524509 EWSR1Q01844 656 aaKnown RBP eCLIP13.31□□□□□ -0.28
PACSIN3-202ENST00000524509 ZNF546Q86UE3 836 aa13.31□□□□□ -0.28
PACSIN3-202ENST00000524509 RNF125Q96EQ8 232 aa13.31□□□□□ -0.28
PACSIN3-202ENST00000524509 RHPN1-AS1Q9BWJ2 59 aa13.31□□□□□ -0.28
PACSIN3-202ENST00000524509 MBD2Q9UBB5 411 aa13.31□□□□□ -0.28
PACSIN3-202ENST00000524509 IGKV1D-37A0A075B6S9 117 aa13.3□□□□□ -0.28
PACSIN3-202ENST00000524509 IGSF23A1L1A6 192 aa13.3□□□□□ -0.28
PACSIN3-202ENST00000524509 AP2S1P53680 142 aaPredicted RBP13.3□□□□□ -0.28
PACSIN3-202ENST00000524509 PAFAH1B2P68402 229 aa13.3□□□□□ -0.28
PACSIN3-202ENST00000524509 VWC2Q2TAL6 325 aa13.3□□□□□ -0.28
PACSIN3-202ENST00000524509 CYP2G1PQ6ZSU1 146 aa13.3□□□□□ -0.28
PACSIN3-202ENST00000524509 INO80EQ8NBZ0 244 aaPredicted RBP13.3□□□□□ -0.28
PACSIN3-202ENST00000524509 WI2-2373I1.2A0A1W2PRP0 233 aa13.29□□□□□ -0.28
PACSIN3-202ENST00000524509 CCNKO75909 580 aa13.29□□□□□ -0.28
PACSIN3-202ENST00000524509 ZNF90Q03938 601 aa13.29□□□□□ -0.28
PACSIN3-202ENST00000524509 ARL16Q0P5N6 197 aa13.29□□□□□ -0.28
PACSIN3-202ENST00000524509 CD300EQ496F6 205 aaPredicted RBP13.29□□□□□ -0.28
PACSIN3-202ENST00000524509 GTSCR1Q86UQ5 136 aa13.29□□□□□ -0.28
PACSIN3-202ENST00000524509 OR5C1Q8NGR4 320 aa13.29□□□□□ -0.28
PACSIN3-202ENST00000524509 OR2T35Q8NGX2 323 aa13.29□□□□□ -0.28
PACSIN3-202ENST00000524509 WDR89Q96FK6 387 aaPredicted RBP13.29□□□□□ -0.28
PACSIN3-202ENST00000524509 VSIRQ9H7M9 311 aa13.29□□□□□ -0.28
PACSIN3-202ENST00000524509 KCNIP2Q9NS61 270 aa13.29□□□□□ -0.28
PACSIN3-202ENST00000524509 IGKV1OR2-108A0A075B7D4 117 aa13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 IGHV3OR16-8A0A075B7F1 116 aa13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 HELTA6NFD8 242 aa13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 CHEK1O14757 476 aa13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 ZNF207O43670 478 aaKnown RBP13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 GP9P14770 177 aa13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 CMC4P56277 68 aaPredicted RBP13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 C1orf194Q5T5A4 169 aa13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 BTNL8Q6UX41 500 aa13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 ADAMTSL5Q6ZMM2 481 aa13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 HAPLN4Q86UW8 402 aa13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 CHAC2Q8WUX2 184 aa13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 SPAG8Q99932 426 aaPredicted RBP13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 PBDC1Q9BVG4 233 aa13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 FBXL17Q9UF56 701 aa13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 MLXQ9UH92 298 aa13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 LSM4Q9Y4Z0 139 aaKnown RBP13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 HSPB11Q9Y547 144 aa13.28□□□□□ -0.28
PACSIN3-202ENST00000524509 TSPAN4O14817 238 aa13.27□□□□□ -0.29
PACSIN3-202ENST00000524509 IFNA5P01569 189 aa13.27□□□□□ -0.29
PACSIN3-202ENST00000524509 CAMLGP49069 296 aa13.27□□□□□ -0.29
PACSIN3-202ENST00000524509 LYZP61626 148 aa13.27□□□□□ -0.29
PACSIN3-202ENST00000524509 NHLH2Q02577 135 aa13.27□□□□□ -0.29
PACSIN3-202ENST00000524509 DEFB121Q5J5C9 76 aa13.27□□□□□ -0.29
PACSIN3-202ENST00000524509 Q6ZNX1 250 aa13.27□□□□□ -0.29
PACSIN3-202ENST00000524509 Q6ZRG5 221 aa13.27□□□□□ -0.29
PACSIN3-202ENST00000524509 ZNF709Q8N972 641 aa13.27□□□□□ -0.29
PACSIN3-202ENST00000524509 PPP1R14BQ96C90 147 aa13.27□□□□□ -0.29
PACSIN3-202ENST00000524509 WDR83OSQ9Y284 106 aa13.27□□□□□ -0.29
PACSIN3-202ENST00000524509 AGPAT2O15120 278 aa13.26□□□□□ -0.29
PACSIN3-202ENST00000524509 PLP1P60201 277 aa13.26□□□□□ -0.29
PACSIN3-202ENST00000524509 KRTAP10-11P60412 298 aa13.26□□□□□ -0.29
PACSIN3-202ENST00000524509 OR2F1Q13607 317 aa13.26□□□□□ -0.29
PACSIN3-202ENST00000524509 GUCA2BQ16661 112 aa13.26□□□□□ -0.29
PACSIN3-202ENST00000524509 ZNF414Q96IQ9 312 aa13.26□□□□□ -0.29
PACSIN3-202ENST00000524509 ATP5SQ99766 215 aa13.26□□□□□ -0.29
PACSIN3-202ENST00000524509 U3KQE9 123 aa13.26□□□□□ -0.29
PACSIN3-202ENST00000524509 ELOA3CA0A087WX78 387 aaPredicted RBP13.25□□□□□ -0.29
PACSIN3-202ENST00000524509 UBE2L5PA0A1B0GUS4 154 aa13.25□□□□□ -0.29
PACSIN3-202ENST00000524509 OR4C46A6NHA9 309 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms