RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 FSHBP01225 129 aa16.28■□□□□ 0.2
SQLE-206ENST00000523430 C9orf152Q5JTZ5 239 aa16.28■□□□□ 0.2
SQLE-206ENST00000523430 TVP23CQ96ET8 276 aa16.28■□□□□ 0.2
SQLE-206ENST00000523430 C21orf62Q9NYP8 219 aa16.28■□□□□ 0.2
SQLE-206ENST00000523430 ZANQ9Y493 2812 aa16.28■□□□□ 0.2
SQLE-206ENST00000523430 ZNF469Q96JG9 3925 aaPredicted RBP16.28■□□□□ 0.2
SQLE-206ENST00000523430 ZNF727A8MUV8 499 aa16.27■□□□□ 0.2
SQLE-206ENST00000523430 GNG7O60262 68 aa16.27■□□□□ 0.2
SQLE-206ENST00000523430 PYYP10082 97 aa16.27■□□□□ 0.2
SQLE-206ENST00000523430 PLP1P60201 277 aa16.27■□□□□ 0.2
SQLE-206ENST00000523430 RHEBQ15382 184 aa16.27■□□□□ 0.2
SQLE-206ENST00000523430 Q56UQ5 140 aa16.27■□□□□ 0.2
SQLE-206ENST00000523430 SMIM7Q9BQ49 75 aa16.27■□□□□ 0.2
SQLE-206ENST00000523430 TMEM167BQ9NRX6 74 aa16.27■□□□□ 0.2
SQLE-206ENST00000523430 LINC00527Q9UJ94 153 aa16.27■□□□□ 0.2
SQLE-206ENST00000523430 PDE6DO43924 150 aa16.27■□□□□ 0.19
SQLE-206ENST00000523430 NDUFS6O75380 124 aaKnown RBP16.27■□□□□ 0.19
SQLE-206ENST00000523430 HYPMO75409 117 aa16.27■□□□□ 0.19
SQLE-206ENST00000523430 RD3LP0DJH9 198 aa16.27■□□□□ 0.19
SQLE-206ENST00000523430 MFAP4P55083 255 aa16.27■□□□□ 0.19
SQLE-206ENST00000523430 UBE2L3P68036 154 aaKnown RBP16.27■□□□□ 0.19
SQLE-206ENST00000523430 CIARTQ8N365 385 aaPredicted RBP16.27■□□□□ 0.19
SQLE-206ENST00000523430 ZNF48Q96MX3 618 aaPredicted RBP16.27■□□□□ 0.19
SQLE-206ENST00000523430 IGHV4-59P01825 116 aa16.26■□□□□ 0.19
SQLE-206ENST00000523430 C19orf54Q5BKX5 351 aa16.26■□□□□ 0.19
SQLE-206ENST00000523430 C16orf82Q7Z2V1 217 aa16.26■□□□□ 0.19
SQLE-206ENST00000523430 SCO2A0A1W2PP80 73 aa16.25■□□□□ 0.19
SQLE-206ENST00000523430 TOMM40O96008 361 aa16.25■□□□□ 0.19
SQLE-206ENST00000523430 HIST1H1BP16401 226 aaKnown RBP16.25■□□□□ 0.19
SQLE-206ENST00000523430 RHOGP84095 191 aa16.25■□□□□ 0.19
SQLE-206ENST00000523430 DERL1Q9BUN8 251 aa16.25■□□□□ 0.19
SQLE-206ENST00000523430 TRAV41A0A0B4J266 112 aa16.25■□□□□ 0.19
SQLE-206ENST00000523430 TSPAN4O14817 238 aa16.25■□□□□ 0.19
SQLE-206ENST00000523430 KLK9Q2XQG4 91 aa16.25■□□□□ 0.19
SQLE-206ENST00000523430 C15orf32Q32M92 178 aa16.25■□□□□ 0.19
SQLE-206ENST00000523430 LEMD1Q68G75 181 aa16.25■□□□□ 0.19
SQLE-206ENST00000523430 CYB5R2Q6BCY4 276 aa16.25■□□□□ 0.19
SQLE-206ENST00000523430 TMEM68Q96MH6 324 aa16.25■□□□□ 0.19
SQLE-206ENST00000523430 PAXXQ9BUH6 204 aa16.25■□□□□ 0.19
SQLE-206ENST00000523430 PITPNC1Q9UKF7 332 aa16.25■□□□□ 0.19
SQLE-206ENST00000523430 KLK9Q9UKQ9 250 aa16.25■□□□□ 0.19
SQLE-206ENST00000523430 HIGD1AQ9Y241 93 aa16.25■□□□□ 0.19
SQLE-206ENST00000523430 TRBV9A0A0B4J1U6 114 aa16.24■□□□□ 0.19
SQLE-206ENST00000523430 OR2T8A6NH00 312 aa16.24■□□□□ 0.19
SQLE-206ENST00000523430 F6UZH7 168 aa16.24■□□□□ 0.19
SQLE-206ENST00000523430 CRIP2P52943 208 aaPredicted RBP16.24■□□□□ 0.19
SQLE-206ENST00000523430 BLCAPP62952 87 aa16.24■□□□□ 0.19
SQLE-206ENST00000523430 TXNDC17Q9BRA2 123 aa16.24■□□□□ 0.19
SQLE-206ENST00000523430 SDF2L1Q9HCN8 221 aa16.24■□□□□ 0.19
SQLE-206ENST00000523430 ARL2-SNX15V9GYD0 113 aa16.24■□□□□ 0.19
SQLE-206ENST00000523430 GGTLC3B5MD39 225 aa16.23■□□□□ 0.19
SQLE-206ENST00000523430 FABP1P07148 127 aa16.23■□□□□ 0.19
SQLE-206ENST00000523430 Q6ZS46 218 aa16.23■□□□□ 0.19
SQLE-206ENST00000523430 FXYD5Q96DB9 178 aa16.23■□□□□ 0.19
SQLE-206ENST00000523430 MS4A10Q96PG2 267 aa16.23■□□□□ 0.19
SQLE-206ENST00000523430 OR51M1Q9H341 326 aa16.23■□□□□ 0.19
SQLE-206ENST00000523430 PRRC2AP48634 2157 aaKnown RBP16.23■□□□□ 0.19
SQLE-206ENST00000523430 TRAV30A0A087WSZ9 112 aa16.22■□□□□ 0.19
SQLE-206ENST00000523430 M0QZK8 103 aa16.22■□□□□ 0.19
SQLE-206ENST00000523430 NDUFB4O95168 129 aa16.22■□□□□ 0.19
SQLE-206ENST00000523430 SNRPCP09234 159 aaKnown RBP16.22■□□□□ 0.19
SQLE-206ENST00000523430 VN1R17PQ8TDU5 208 aa16.22■□□□□ 0.19
SQLE-206ENST00000523430 NAT8Q9UHE5 227 aa16.22■□□□□ 0.19
SQLE-206ENST00000523430 IL4P05112 153 aa16.22■□□□□ 0.19
SQLE-206ENST00000523430 YPEL3P61236 119 aaPredicted RBP16.22■□□□□ 0.19
SQLE-206ENST00000523430 ZNF491Q8N8L2 437 aa16.22■□□□□ 0.19
SQLE-206ENST00000523430 ZNF502Q8TBZ5 544 aa16.22■□□□□ 0.19
SQLE-206ENST00000523430 RNF125Q96EQ8 232 aa16.22■□□□□ 0.19
SQLE-206ENST00000523430 SMCO4Q9NRQ5 59 aa16.22■□□□□ 0.19
SQLE-206ENST00000523430 SMAD7O15105 426 aaKnown RBP16.21■□□□□ 0.19
SQLE-206ENST00000523430 IGHG2P01859 326 aa16.21■□□□□ 0.19
SQLE-206ENST00000523430 IGF1P05019 195 aa16.21■□□□□ 0.19
SQLE-206ENST00000523430 IER3P46695 156 aa16.21■□□□□ 0.19
SQLE-206ENST00000523430 PNRC1Q12796 327 aaPredicted RBP16.21■□□□□ 0.19
SQLE-206ENST00000523430 ISOC2Q96AB3 205 aa16.21■□□□□ 0.19
SQLE-206ENST00000523430 NOL4LQ96MY1 436 aaPredicted RBP16.21■□□□□ 0.19
SQLE-206ENST00000523430 SLC25A39Q9BZJ4 359 aaPredicted RBP16.21■□□□□ 0.19
SQLE-206ENST00000523430 MRPL27Q9P0M9 148 aaKnown RBP16.21■□□□□ 0.19
SQLE-206ENST00000523430 PDZD2O15018 2839 aa16.21■□□□□ 0.19
SQLE-206ENST00000523430 GP9P14770 177 aa16.2■□□□□ 0.18
SQLE-206ENST00000523430 FCGR2BP31994 310 aaPredicted RBP16.2■□□□□ 0.18
SQLE-206ENST00000523430 GPR183P32249 361 aa16.2■□□□□ 0.18
SQLE-206ENST00000523430 C9orf139Q6ZV77 190 aa16.2■□□□□ 0.18
SQLE-206ENST00000523430 NECAP1Q8NC96 275 aa16.2■□□□□ 0.18
SQLE-206ENST00000523430 CHRDL1Q9BU40 450 aa16.2■□□□□ 0.18
SQLE-206ENST00000523430 GCN1Q92616 2671 aaKnown RBP16.2■□□□□ 0.18
SQLE-206ENST00000523430 WI2-2373I1.2A0A1W2PRP0 233 aa16.2■□□□□ 0.18
SQLE-206ENST00000523430 CTSGP08311 255 aa16.2■□□□□ 0.18
SQLE-206ENST00000523430 ADMP35318 185 aa16.2■□□□□ 0.18
SQLE-206ENST00000523430 ADIRFQ15847 76 aa16.2■□□□□ 0.18
SQLE-206ENST00000523430 USF2Q15853 346 aaPredicted RBP16.2■□□□□ 0.18
SQLE-206ENST00000523430 TMEM241Q24JQ0 296 aa16.2■□□□□ 0.18
SQLE-206ENST00000523430 C11orf52Q96A22 123 aa16.2■□□□□ 0.18
SQLE-206ENST00000523430 CCDC140Q96MF4 163 aa16.2■□□□□ 0.18
SQLE-206ENST00000523430 RPL23P62829 140 aaKnown RBP16.19■□□□□ 0.18
SQLE-206ENST00000523430 TXN2Q99757 166 aa16.19■□□□□ 0.18
SQLE-206ENST00000523430 A0A1W2PRE2 83 aa16.18■□□□□ 0.18
SQLE-206ENST00000523430 OR2C1O95371 312 aa16.18■□□□□ 0.18
SQLE-206ENST00000523430 STXBP6Q8NFX7 210 aa16.18■□□□□ 0.18
SQLE-206ENST00000523430 CREBBPQ92793 2442 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms