RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 WDR12Q9GZL7 423 aaKnown RBP18.42■□□□□ 0.54
PVT1-219ENST00000523427 SLC35B3Q9H1N7 401 aa18.42■□□□□ 0.54
PVT1-219ENST00000523427 VBP1P61758 197 aa18.41■□□□□ 0.54
PVT1-219ENST00000523427 ETFRF1Q6IPR1 90 aa18.41■□□□□ 0.54
PVT1-219ENST00000523427 TMEM88Q6PEY1 159 aa18.41■□□□□ 0.54
PVT1-219ENST00000523427 TERB2Q8NHR7 220 aa18.41■□□□□ 0.54
PVT1-219ENST00000523427 LHFPL5Q8TAF8 219 aa18.41■□□□□ 0.54
PVT1-219ENST00000523427 GPR146Q96CH1 333 aa18.41■□□□□ 0.54
PVT1-219ENST00000523427 TEX13DA0A0J9YY54 714 aaPredicted RBP18.4■□□□□ 0.54
PVT1-219ENST00000523427 RNF212Q495C1 297 aa18.4■□□□□ 0.54
PVT1-219ENST00000523427 FAM219AQ8IW50 185 aa18.4■□□□□ 0.54
PVT1-219ENST00000523427 COQ8AQ8NI60 647 aa18.4■□□□□ 0.54
PVT1-219ENST00000523427 TMEM222Q9H0R3 208 aa18.4■□□□□ 0.54
PVT1-219ENST00000523427 SAV1Q9H4B6 383 aaPredicted RBP18.4■□□□□ 0.54
PVT1-219ENST00000523427 GOLT1BQ9Y3E0 138 aa18.4■□□□□ 0.54
PVT1-219ENST00000523427 YTHDF2Q9Y5A9 579 aaKnown RBP18.4■□□□□ 0.54
PVT1-219ENST00000523427 LOC102723971A0A1B0GUV8 181 aa18.39■□□□□ 0.53
PVT1-219ENST00000523427 TNFAIP8O95379 198 aa18.39■□□□□ 0.53
PVT1-219ENST00000523427 CDS2O95674 445 aa18.39■□□□□ 0.53
PVT1-219ENST00000523427 HBE1P02100 147 aa18.39■□□□□ 0.53
PVT1-219ENST00000523427 ID1P41134 155 aa18.39■□□□□ 0.53
PVT1-219ENST00000523427 VCX3AQ9NNX9 186 aa18.39■□□□□ 0.53
PVT1-219ENST00000523427 TMED3Q9Y3Q3 217 aa18.39■□□□□ 0.53
PVT1-219ENST00000523427 TEX48A0A1B0GUV7 120 aa18.38■□□□□ 0.53
PVT1-219ENST00000523427 F6UB75 175 aa18.38■□□□□ 0.53
PVT1-219ENST00000523427 RAB3DO95716 219 aa18.38■□□□□ 0.53
PVT1-219ENST00000523427 TMEM268Q5VZI3 342 aa18.38■□□□□ 0.53
PVT1-219ENST00000523427 FOXI2Q6ZQN5 318 aa18.38■□□□□ 0.53
PVT1-219ENST00000523427 SELENOHQ8IZQ5 122 aaKnown RBP18.38■□□□□ 0.53
PVT1-219ENST00000523427 ZNF709Q8N972 641 aa18.38■□□□□ 0.53
PVT1-219ENST00000523427 GLYATL2Q8WU03 294 aa18.38■□□□□ 0.53
PVT1-219ENST00000523427 RBPMSQ93062 196 aaKnown RBP18.38■□□□□ 0.53
PVT1-219ENST00000523427 RNF125Q96EQ8 232 aa18.38■□□□□ 0.53
PVT1-219ENST00000523427 MTFP1Q9UDX5 166 aa18.38■□□□□ 0.53
PVT1-219ENST00000523427 C14orf166Q9Y224 244 aaKnown RBP18.38■□□□□ 0.53
PVT1-219ENST00000523427 C16orf90A8MZG2 172 aa18.37■□□□□ 0.53
PVT1-219ENST00000523427 RORCP51449 518 aa18.37■□□□□ 0.53
PVT1-219ENST00000523427 AARDQ4LEZ3 155 aa18.37■□□□□ 0.53
PVT1-219ENST00000523427 B3GALNT1O75752 331 aa18.36■□□□□ 0.53
PVT1-219ENST00000523427 DAD1P61803 113 aa18.36■□□□□ 0.53
PVT1-219ENST00000523427 PSG9Q00887 426 aa18.36■□□□□ 0.53
PVT1-219ENST00000523427 TNP2Q05952 138 aa18.36■□□□□ 0.53
PVT1-219ENST00000523427 FAAP20Q6NZ36 180 aa18.36■□□□□ 0.53
PVT1-219ENST00000523427 C1orf158Q8N1D5 194 aa18.36■□□□□ 0.53
PVT1-219ENST00000523427 ATG101Q9BSB4 218 aa18.36■□□□□ 0.53
PVT1-219ENST00000523427 NAA60Q9H7X0 242 aa18.36■□□□□ 0.53
PVT1-219ENST00000523427 EXTL2Q9UBQ6 330 aa18.36■□□□□ 0.53
PVT1-219ENST00000523427 NACAE9PAV3 2078 aa18.35■□□□□ 0.53
PVT1-219ENST00000523427 TBPP20226 339 aa18.35■□□□□ 0.53
PVT1-219ENST00000523427 KLF9Q13886 244 aaPredicted RBP18.35■□□□□ 0.53
PVT1-219ENST00000523427 RRN3P1Q2M238 152 aa18.35■□□□□ 0.53
PVT1-219ENST00000523427 FAM78BQ5VT40 261 aa18.35■□□□□ 0.53
PVT1-219ENST00000523427 EBLN2Q6P2I7 272 aa18.35■□□□□ 0.53
PVT1-219ENST00000523427 RTBDNQ9BSG5 229 aaPredicted RBP18.35■□□□□ 0.53
PVT1-219ENST00000523427 MAGT1Q9H0U3 335 aa18.35■□□□□ 0.53
PVT1-219ENST00000523427 PFDN2Q9UHV9 154 aa18.35■□□□□ 0.53
PVT1-219ENST00000523427 ZFP92A6NM28 416 aa18.34■□□□□ 0.53
PVT1-219ENST00000523427 PSMB3P49720 205 aa18.34■□□□□ 0.53
PVT1-219ENST00000523427 LYZP61626 148 aa18.34■□□□□ 0.53
PVT1-219ENST00000523427 ZNF90Q03938 601 aa18.34■□□□□ 0.53
PVT1-219ENST00000523427 STEAP1BQ6NZ63 245 aa18.34■□□□□ 0.53
PVT1-219ENST00000523427 MZT2AQ6P582 158 aa18.34■□□□□ 0.53
PVT1-219ENST00000523427 NOXA1Q86UR1 476 aa18.34■□□□□ 0.53
PVT1-219ENST00000523427 TMEM229BQ8NBD8 167 aa18.34■□□□□ 0.53
PVT1-219ENST00000523427 PPP1R14BQ96C90 147 aa18.34■□□□□ 0.53
PVT1-219ENST00000523427 ABHD1Q96SE0 405 aa18.34■□□□□ 0.53
PVT1-219ENST00000523427 TMEM208Q9BTX3 173 aa18.34■□□□□ 0.53
PVT1-219ENST00000523427 FUNDC2Q9BWH2 189 aa18.34■□□□□ 0.53
PVT1-219ENST00000523427 HSPG2P98160 4391 aa18.34■□□□□ 0.53
PVT1-219ENST00000523427 A0A087WXM4 84 aa18.33■□□□□ 0.52
PVT1-219ENST00000523427 NUP62P37198 522 aaPredicted RBP18.33■□□□□ 0.52
PVT1-219ENST00000523427 TAS2R19P59542 299 aa18.33■□□□□ 0.52
PVT1-219ENST00000523427 MAPKAPK5-AS1Q8N8E1 139 aa18.33■□□□□ 0.52
PVT1-219ENST00000523427 PRR13Q9NZ81 148 aa18.33■□□□□ 0.52
PVT1-219ENST00000523427 OR2F1Q13607 317 aa18.32■□□□□ 0.52
PVT1-219ENST00000523427 OXA1LQ15070 435 aa18.32■□□□□ 0.52
PVT1-219ENST00000523427 NMSQ5H8A3 153 aa18.32■□□□□ 0.52
PVT1-219ENST00000523427 PRM2P04554 102 aa18.31■□□□□ 0.52
PVT1-219ENST00000523427 SULT1A3P0DMM9 295 aa18.31■□□□□ 0.52
PVT1-219ENST00000523427 SULT1A4P0DMN0 295 aa18.31■□□□□ 0.52
PVT1-219ENST00000523427 ZNF79Q15937 498 aa18.31■□□□□ 0.52
PVT1-219ENST00000523427 SOCS3O14543 225 aa18.3■□□□□ 0.52
PVT1-219ENST00000523427 OR8G2PQ6IF36 304 aa18.3■□□□□ 0.52
PVT1-219ENST00000523427 OR8I2Q8N0Y5 310 aa18.3■□□□□ 0.52
PVT1-219ENST00000523427 LGI3Q8N145 548 aa18.3■□□□□ 0.52
PVT1-219ENST00000523427 CLUHP3Q96NS8 147 aa18.3■□□□□ 0.52
PVT1-219ENST00000523427 SUPT4H1P63272 117 aaKnown RBP18.29■□□□□ 0.52
PVT1-219ENST00000523427 GPR107Q5VW38 600 aa18.29■□□□□ 0.52
PVT1-219ENST00000523427 A0A0J9YX75 114 aa18.28■□□□□ 0.52
PVT1-219ENST00000523427 SPATA31B1PQ5VZV4 182 aa18.28■□□□□ 0.52
PVT1-219ENST00000523427 C15orf53Q8NAA6 179 aa18.28■□□□□ 0.52
PVT1-219ENST00000523427 DTD1Q8TEA8 209 aa18.28■□□□□ 0.52
PVT1-219ENST00000523427 SLC35E1Q96K37 410 aa18.28■□□□□ 0.52
PVT1-219ENST00000523427 C20orf173Q96LM9 149 aa18.28■□□□□ 0.52
PVT1-219ENST00000523427 RBKSQ9H477 322 aa18.28■□□□□ 0.52
PVT1-219ENST00000523427 U3KQ87 197 aa18.28■□□□□ 0.52
PVT1-219ENST00000523427 IGKV1D-37A0A075B6S9 117 aa18.27■□□□□ 0.52
PVT1-219ENST00000523427 CRYM-AS1A6NIL9 109 aa18.27■□□□□ 0.52
PVT1-219ENST00000523427 ZNF705GA8MUZ8 300 aaPredicted RBP18.27■□□□□ 0.52
PVT1-219ENST00000523427 ISLRO14498 428 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 177.6 ms