RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 OR51S1Q8NGJ8 323 aa11.06□□□□□ -0.64
MRPS28-209ENST00000522987 C1QTNF4Q9BXJ3 329 aa11.06□□□□□ -0.64
MRPS28-209ENST00000522987 WDR12Q9GZL7 423 aaKnown RBP11.06□□□□□ -0.64
MRPS28-209ENST00000522987 RBKSQ9H477 322 aa11.06□□□□□ -0.64
MRPS28-209ENST00000522987 GPR132Q9UNW8 380 aa11.06□□□□□ -0.64
MRPS28-209ENST00000522987 IGLV2-18A0A075B6J9 118 aa11.05□□□□□ -0.64
MRPS28-209ENST00000522987 AMBPP02760 352 aa11.05□□□□□ -0.64
MRPS28-209ENST00000522987 AKAIN1P0CW23 69 aa11.05□□□□□ -0.64
MRPS28-209ENST00000522987 HLA-DRB4P13762 266 aa11.05□□□□□ -0.64
MRPS28-209ENST00000522987 HTN3P15516 51 aa11.05□□□□□ -0.64
MRPS28-209ENST00000522987 NUTF2P61970 127 aaKnown RBP11.05□□□□□ -0.64
MRPS28-209ENST00000522987 ZNF90Q03938 601 aa11.05□□□□□ -0.64
MRPS28-209ENST00000522987 OR2F1Q13607 317 aa11.05□□□□□ -0.64
MRPS28-209ENST00000522987 IL18Q14116 193 aa11.05□□□□□ -0.64
MRPS28-209ENST00000522987 SPCS2Q15005 226 aa11.05□□□□□ -0.64
MRPS28-209ENST00000522987 NMSQ5H8A3 153 aa11.05□□□□□ -0.64
MRPS28-209ENST00000522987 CLVS1Q8IUQ0 354 aaPredicted RBP11.05□□□□□ -0.64
MRPS28-209ENST00000522987 OR4B1Q8NGF8 309 aa11.05□□□□□ -0.64
MRPS28-209ENST00000522987 RNF125Q96EQ8 232 aa11.05□□□□□ -0.64
MRPS28-209ENST00000522987 NDUFAF3Q9BU61 184 aa11.05□□□□□ -0.64
MRPS28-209ENST00000522987 HLA-DRB4X5D2U9 266 aa11.05□□□□□ -0.64
MRPS28-209ENST00000522987 ZFP92A6NM28 416 aa11.04□□□□□ -0.64
MRPS28-209ENST00000522987 F6UB75 175 aa11.04□□□□□ -0.64
MRPS28-209ENST00000522987 AKR1C4P17516 323 aa11.04□□□□□ -0.64
MRPS28-209ENST00000522987 LYZP61626 148 aa11.04□□□□□ -0.64
MRPS28-209ENST00000522987 LYZL2Q7Z4W2 148 aa11.04□□□□□ -0.64
MRPS28-209ENST00000522987 POM121L12Q8N7R1 296 aa11.04□□□□□ -0.64
MRPS28-209ENST00000522987 DTD1Q8TEA8 209 aa11.04□□□□□ -0.64
MRPS28-209ENST00000522987 C15orf40Q8WUR7 153 aa11.04□□□□□ -0.64
MRPS28-209ENST00000522987 SMIM4Q8WVI0 70 aa11.04□□□□□ -0.64
MRPS28-209ENST00000522987 SLC35B3Q9H1N7 401 aa11.04□□□□□ -0.64
MRPS28-209ENST00000522987 PAIP2BQ9ULR5 123 aaKnown RBP11.04□□□□□ -0.64
MRPS28-209ENST00000522987 TMEM56-RWDD3S4R434 201 aa11.04□□□□□ -0.64
MRPS28-209ENST00000522987 A0A1B0GVY2 172 aa11.03□□□□□ -0.64
MRPS28-209ENST00000522987 PRSS29PA6NIE9 313 aa11.03□□□□□ -0.64
MRPS28-209ENST00000522987 RTL8CO15255 209 aa11.03□□□□□ -0.64
MRPS28-209ENST00000522987 GSTZ1O43708 216 aaPredicted RBP11.03□□□□□ -0.64
MRPS28-209ENST00000522987 P0DMU3 169 aa11.03□□□□□ -0.64
MRPS28-209ENST00000522987 FAM231AP0DMU4 169 aa11.03□□□□□ -0.64
MRPS28-209ENST00000522987 FAM231CP0DMU5 169 aa11.03□□□□□ -0.64
MRPS28-209ENST00000522987 KLF9Q13886 244 aaPredicted RBP11.03□□□□□ -0.64
MRPS28-209ENST00000522987 SURF2Q15527 256 aaPredicted RBP11.03□□□□□ -0.64
MRPS28-209ENST00000522987 UBE2DNLQ8IWF7 75 aa11.03□□□□□ -0.64
MRPS28-209ENST00000522987 LGI3Q8N145 548 aa11.03□□□□□ -0.64
MRPS28-209ENST00000522987 COQ8AQ8NI60 647 aa11.03□□□□□ -0.64
MRPS28-209ENST00000522987 PPP1R14BQ96C90 147 aa11.03□□□□□ -0.64
MRPS28-209ENST00000522987 DIRAS2Q96HU8 199 aa11.03□□□□□ -0.64
MRPS28-209ENST00000522987 MCUBQ9NWR8 336 aa11.03□□□□□ -0.64
MRPS28-209ENST00000522987 DNAH17Q9UFH2 4485 aa11.02□□□□□ -0.65
MRPS28-209ENST00000522987 IGKV1D-37A0A075B6S9 117 aa11.02□□□□□ -0.65
MRPS28-209ENST00000522987 SPART-AS1P0CW21 52 aa11.02□□□□□ -0.65
MRPS28-209ENST00000522987 IAPPP10997 89 aa11.02□□□□□ -0.65
MRPS28-209ENST00000522987 NKX2-1P43699 371 aaPredicted RBP11.02□□□□□ -0.65
MRPS28-209ENST00000522987 SSBP1Q04837 148 aaKnown RBP11.02□□□□□ -0.65
MRPS28-209ENST00000522987 SMCO1Q147U7 214 aa11.02□□□□□ -0.65
MRPS28-209ENST00000522987 ZNF705AQ6ZN79 300 aaPredicted RBP11.02□□□□□ -0.65
MRPS28-209ENST00000522987 LINC00336Q6ZUF6 198 aa11.02□□□□□ -0.65
MRPS28-209ENST00000522987 OR1S1Q8NH92 325 aa11.02□□□□□ -0.65
MRPS28-209ENST00000522987 ZNF705FA8MVS1 300 aaPredicted RBP11.01□□□□□ -0.65
MRPS28-209ENST00000522987 ZNF705DP0CH99 300 aaPredicted RBP11.01□□□□□ -0.65
MRPS28-209ENST00000522987 ZNF705BP0CI00 300 aaPredicted RBP11.01□□□□□ -0.65
MRPS28-209ENST00000522987 MRPS10P82664 201 aaKnown RBP11.01□□□□□ -0.65
MRPS28-209ENST00000522987 GAMTQ14353 236 aa11.01□□□□□ -0.65
MRPS28-209ENST00000522987 FAM222AQ5U5X8 452 aa11.01□□□□□ -0.65
MRPS28-209ENST00000522987 NOXA1Q86UR1 476 aa11.01□□□□□ -0.65
MRPS28-209ENST00000522987 SLC35E1Q96K37 410 aa11.01□□□□□ -0.65
MRPS28-209ENST00000522987 PRRT1Q99946 306 aa11.01□□□□□ -0.65
MRPS28-209ENST00000522987 SAV1Q9H4B6 383 aaPredicted RBP11.01□□□□□ -0.65
MRPS28-209ENST00000522987 HSPB7Q9UBY9 170 aa11.01□□□□□ -0.65
MRPS28-209ENST00000522987 KCNIP3Q9Y2W7 256 aa11.01□□□□□ -0.65
MRPS28-209ENST00000522987 CCR6P51684 374 aa11□□□□□ -0.65
MRPS28-209ENST00000522987 SUPT4H1P63272 117 aaKnown RBP11□□□□□ -0.65
MRPS28-209ENST00000522987 GPR141Q7Z602 305 aa11□□□□□ -0.65
MRPS28-209ENST00000522987 ZNF709Q8N972 641 aa11□□□□□ -0.65
MRPS28-209ENST00000522987 C7orf50Q9BRJ6 194 aaKnown RBP11□□□□□ -0.65
MRPS28-209ENST00000522987 U3KQ87 197 aa11□□□□□ -0.65
MRPS28-209ENST00000522987 FAT2Q9NYQ8 4349 aa11□□□□□ -0.65
MRPS28-209ENST00000522987 ANKRD20A5PA0PJZ0 165 aa10.99□□□□□ -0.65
MRPS28-209ENST00000522987 SOCS3O14543 225 aa10.99□□□□□ -0.65
MRPS28-209ENST00000522987 PRM2P04554 102 aa10.99□□□□□ -0.65
MRPS28-209ENST00000522987 ID1P41134 155 aa10.99□□□□□ -0.65
MRPS28-209ENST00000522987 FAM78BQ5VT40 261 aa10.99□□□□□ -0.65
MRPS28-209ENST00000522987 FOXI2Q6ZQN5 318 aa10.99□□□□□ -0.65
MRPS28-209ENST00000522987 IL22RA2Q969J5 263 aa10.99□□□□□ -0.65
MRPS28-209ENST00000522987 C20orf173Q96LM9 149 aa10.99□□□□□ -0.65
MRPS28-209ENST00000522987 NIPSNAP3BQ9BS92 247 aa10.99□□□□□ -0.65
MRPS28-209ENST00000522987 SLC25A22Q9H936 323 aa10.99□□□□□ -0.65
MRPS28-209ENST00000522987 SEPSECSQ9HD40 501 aaKnown RBP10.99□□□□□ -0.65
MRPS28-209ENST00000522987 DKK2Q9UBU2 259 aa10.99□□□□□ -0.65
MRPS28-209ENST00000522987 RFNGQ9Y644 331 aa10.99□□□□□ -0.65
MRPS28-209ENST00000522987 DNAH2Q9P225 4427 aa10.99□□□□□ -0.65
MRPS28-209ENST00000522987 A0A0B4J2A0 478 aa10.98□□□□□ -0.65
MRPS28-209ENST00000522987 LOC102723971A0A1B0GUV8 181 aa10.98□□□□□ -0.65
MRPS28-209ENST00000522987 IFNA21P01568 189 aa10.98□□□□□ -0.65
MRPS28-209ENST00000522987 PRB4P10163 310 aaPredicted RBP10.98□□□□□ -0.65
MRPS28-209ENST00000522987 PSMB3P49720 205 aa10.98□□□□□ -0.65
MRPS28-209ENST00000522987 OR8G2PQ6IF36 304 aa10.98□□□□□ -0.65
MRPS28-209ENST00000522987 TMED4Q7Z7H5 227 aa10.98□□□□□ -0.65
MRPS28-209ENST00000522987 OR8I2Q8N0Y5 310 aa10.98□□□□□ -0.65
MRPS28-209ENST00000522987 C1orf158Q8N1D5 194 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms