RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 SCGB2A1O75556 95 aa10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 ATG12O94817 140 aa10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 C2orf83Q53S99 150 aa10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 RNASE10Q5GAN6 216 aaKnown RBP10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 ZNF709Q8N972 641 aa10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 OR52I2Q8NH67 350 aa10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 NPIPB3Q92617 1050 aa10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 WDR12Q9GZL7 423 aaKnown RBP10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 SEPSECSQ9HD40 501 aaKnown RBP10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 COPZ2Q9P299 210 aa10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 DKK2Q9UBU2 259 aa10.85□□□□□ -0.67
TRAPPC9-213ENST00000522504 IFNA21P01568 189 aa10.84□□□□□ -0.67
TRAPPC9-213ENST00000522504 SLC25A4P12235 298 aa10.84□□□□□ -0.67
TRAPPC9-213ENST00000522504 NKX2-1P43699 371 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC9-213ENST00000522504 FAM222AQ5U5X8 452 aa10.84□□□□□ -0.67
TRAPPC9-213ENST00000522504 UBE2DNLQ8IWF7 75 aa10.84□□□□□ -0.67
TRAPPC9-213ENST00000522504 ARRDC1Q8N5I2 433 aa10.84□□□□□ -0.67
TRAPPC9-213ENST00000522504 OR52E5Q8NH55 327 aa10.84□□□□□ -0.67
TRAPPC9-213ENST00000522504 RNASE11Q8TAA1 199 aaKnown RBP10.84□□□□□ -0.67
TRAPPC9-213ENST00000522504 RNASEH2CQ8TDP1 164 aaKnown RBP10.84□□□□□ -0.67
TRAPPC9-213ENST00000522504 MIXL1Q9H2W2 232 aa10.84□□□□□ -0.67
TRAPPC9-213ENST00000522504 HEYLQ9NQ87 328 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC9-213ENST00000522504 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC9-213ENST00000522504 CDS2O95674 445 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 TOMM40O96008 361 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 OR5AC1P0C628 307 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 RD3LP0DJH9 198 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 PSG1P11464 419 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 S100A5P33763 92 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 MEF2DQ14814 521 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 SLC24A4Q8NFF2 622 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 OR51G1Q8NGK1 321 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 TERB2Q8NHR7 220 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 MARCH1Q8TCQ1 289 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 GLYATL2Q8WU03 294 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 GPR146Q96CH1 333 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 ACY3Q96HD9 319 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 TMEM222Q9H0R3 208 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 CACNG5Q9UF02 275 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 RFNGQ9Y644 331 aa10.83□□□□□ -0.68
TRAPPC9-213ENST00000522504 TMEM189A5PLL7 270 aa10.82□□□□□ -0.68
TRAPPC9-213ENST00000522504 SMIM9A6NGZ8 99 aa10.82□□□□□ -0.68
TRAPPC9-213ENST00000522504 HTN3P15516 51 aa10.82□□□□□ -0.68
TRAPPC9-213ENST00000522504 SELENOHQ8IZQ5 122 aaKnown RBP10.82□□□□□ -0.68
TRAPPC9-213ENST00000522504 CCDC71LQ8N9Z2 235 aa10.82□□□□□ -0.68
TRAPPC9-213ENST00000522504 ZFAND1Q8TCF1 268 aa10.82□□□□□ -0.68
TRAPPC9-213ENST00000522504 FAM210BQ96KR6 192 aa10.82□□□□□ -0.68
TRAPPC9-213ENST00000522504 LINC00052Q96N35 136 aa10.82□□□□□ -0.68
TRAPPC9-213ENST00000522504 ABHD1Q96SE0 405 aa10.82□□□□□ -0.68
TRAPPC9-213ENST00000522504 NIPSNAP3BQ9BS92 247 aa10.82□□□□□ -0.68
TRAPPC9-213ENST00000522504 RTBDNQ9BSG5 229 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC9-213ENST00000522504 SLC35B3Q9H1N7 401 aa10.82□□□□□ -0.68
TRAPPC9-213ENST00000522504 SAV1Q9H4B6 383 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC9-213ENST00000522504 EXTL2Q9UBQ6 330 aa10.82□□□□□ -0.68
TRAPPC9-213ENST00000522504 MTFP1Q9UDX5 166 aa10.82□□□□□ -0.68
TRAPPC9-213ENST00000522504 CEBPZOSA8MTT3 80 aa10.81□□□□□ -0.68
TRAPPC9-213ENST00000522504 SOCS3O14543 225 aa10.81□□□□□ -0.68
TRAPPC9-213ENST00000522504 SCGB2B2Q4G0G5 96 aa10.81□□□□□ -0.68
TRAPPC9-213ENST00000522504 C1orf134Q5TEV5 83 aa10.81□□□□□ -0.68
TRAPPC9-213ENST00000522504 FAAP20Q6NZ36 180 aa10.81□□□□□ -0.68
TRAPPC9-213ENST00000522504 TMEM88Q6PEY1 159 aa10.81□□□□□ -0.68
TRAPPC9-213ENST00000522504 FAM219AQ8IW50 185 aa10.81□□□□□ -0.68
TRAPPC9-213ENST00000522504 C1orf158Q8N1D5 194 aa10.81□□□□□ -0.68
TRAPPC9-213ENST00000522504 NACAE9PAV3 2078 aa10.8□□□□□ -0.68
TRAPPC9-213ENST00000522504 TEX13DA0A0J9YY54 714 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC9-213ENST00000522504 F6UB75 175 aa10.8□□□□□ -0.68
TRAPPC9-213ENST00000522504 TBPP20226 339 aa10.8□□□□□ -0.68
TRAPPC9-213ENST00000522504 TNFSF8P32971 234 aa10.8□□□□□ -0.68
TRAPPC9-213ENST00000522504 ZNF79Q15937 498 aa10.8□□□□□ -0.68
TRAPPC9-213ENST00000522504 RNF212Q495C1 297 aa10.8□□□□□ -0.68
TRAPPC9-213ENST00000522504 FOXI2Q6ZQN5 318 aa10.8□□□□□ -0.68
TRAPPC9-213ENST00000522504 RBPMSQ93062 196 aaKnown RBP10.8□□□□□ -0.68
TRAPPC9-213ENST00000522504 RNF125Q96EQ8 232 aa10.8□□□□□ -0.68
TRAPPC9-213ENST00000522504 DIRAS2Q96HU8 199 aa10.8□□□□□ -0.68
TRAPPC9-213ENST00000522504 PBDC1Q9BVG4 233 aa10.8□□□□□ -0.68
TRAPPC9-213ENST00000522504 YTHDF2Q9Y5A9 579 aaKnown RBP10.8□□□□□ -0.68
TRAPPC9-213ENST00000522504 GSTZ1O43708 216 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC9-213ENST00000522504 B3GALNT1O75752 331 aa10.79□□□□□ -0.68
TRAPPC9-213ENST00000522504 RAB3DO95716 219 aa10.79□□□□□ -0.68
TRAPPC9-213ENST00000522504 ZNF90Q03938 601 aa10.79□□□□□ -0.68
TRAPPC9-213ENST00000522504 TNP2Q05952 138 aa10.79□□□□□ -0.68
TRAPPC9-213ENST00000522504 NMSQ5H8A3 153 aa10.79□□□□□ -0.68
TRAPPC9-213ENST00000522504 TMEM229BQ8NBD8 167 aa10.79□□□□□ -0.68
TRAPPC9-213ENST00000522504 OR4B1Q8NGF8 309 aa10.79□□□□□ -0.68
TRAPPC9-213ENST00000522504 CLUHP3Q96NS8 147 aa10.79□□□□□ -0.68
TRAPPC9-213ENST00000522504 NAA60Q9H7X0 242 aa10.79□□□□□ -0.68
TRAPPC9-213ENST00000522504 PRR13Q9NZ81 148 aa10.79□□□□□ -0.68
TRAPPC9-213ENST00000522504 IGKV1D-37A0A075B6S9 117 aa10.78□□□□□ -0.68
TRAPPC9-213ENST00000522504 LOC102723971A0A1B0GUV8 181 aa10.78□□□□□ -0.68
TRAPPC9-213ENST00000522504 PRM2P04554 102 aa10.78□□□□□ -0.68
TRAPPC9-213ENST00000522504 IL18Q14116 193 aa10.78□□□□□ -0.68
TRAPPC9-213ENST00000522504 OXA1LQ15070 435 aa10.78□□□□□ -0.68
TRAPPC9-213ENST00000522504 SOHLH1Q5JUK2 328 aa10.78□□□□□ -0.68
TRAPPC9-213ENST00000522504 FAM78BQ5VT40 261 aa10.78□□□□□ -0.68
TRAPPC9-213ENST00000522504 TMEM268Q5VZI3 342 aa10.78□□□□□ -0.68
TRAPPC9-213ENST00000522504 ETFRF1Q6IPR1 90 aa10.78□□□□□ -0.68
TRAPPC9-213ENST00000522504 STEAP1BQ6NZ63 245 aa10.78□□□□□ -0.68
TRAPPC9-213ENST00000522504 C20orf173Q96LM9 149 aa10.78□□□□□ -0.68
TRAPPC9-213ENST00000522504 FABP12A6NFH5 140 aa10.77□□□□□ -0.69
TRAPPC9-213ENST00000522504 PSMB3P49720 205 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms