RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 MPDU1O75352 247 aa13.22□□□□□ -0.29
TRAM1-203ENST00000520700 FOLR2P14207 255 aa13.22□□□□□ -0.29
TRAM1-203ENST00000520700 NUP62P37198 522 aaPredicted RBP13.22□□□□□ -0.29
TRAM1-203ENST00000520700 TM4SF20Q53R12 229 aa13.22□□□□□ -0.29
TRAM1-203ENST00000520700 TCTE3Q8IZS6 198 aa13.22□□□□□ -0.29
TRAM1-203ENST00000520700 TECRQ9NZ01 308 aaKnown RBP13.22□□□□□ -0.29
TRAM1-203ENST00000520700 HMSDA8MTL9 139 aa13.21□□□□□ -0.29
TRAM1-203ENST00000520700 DFFBO76075 338 aa13.21□□□□□ -0.29
TRAM1-203ENST00000520700 IGLV1-51P01701 117 aa13.21□□□□□ -0.29
TRAM1-203ENST00000520700 CRYBB3P26998 211 aa13.21□□□□□ -0.29
TRAM1-203ENST00000520700 PLP1P60201 277 aa13.21□□□□□ -0.29
TRAM1-203ENST00000520700 RAB31Q13636 194 aa13.21□□□□□ -0.29
TRAM1-203ENST00000520700 CYP2G1PQ6ZSU1 146 aa13.21□□□□□ -0.29
TRAM1-203ENST00000520700 INO80EQ8NBZ0 244 aaPredicted RBP13.21□□□□□ -0.29
TRAM1-203ENST00000520700 OR2K2Q8NGT1 345 aa13.21□□□□□ -0.29
TRAM1-203ENST00000520700 C20orf24Q9BUV8 137 aa13.21□□□□□ -0.29
TRAM1-203ENST00000520700 PARD6GQ9BYG4 376 aaPredicted RBP13.21□□□□□ -0.29
TRAM1-203ENST00000520700 ZMAT5Q9UDW3 170 aaKnown RBP13.21□□□□□ -0.29
TRAM1-203ENST00000520700 SMPXQ9UHP9 88 aa13.21□□□□□ -0.29
TRAM1-203ENST00000520700 SLC45A2Q9UMX9 530 aa13.21□□□□□ -0.29
TRAM1-203ENST00000520700 U3KQE9 123 aa13.21□□□□□ -0.29
TRAM1-203ENST00000520700 A0A1B0GVG6 124 aa13.2□□□□□ -0.3
TRAM1-203ENST00000520700 RNF222A6NCQ9 220 aa13.2□□□□□ -0.3
TRAM1-203ENST00000520700 SAP30O75446 220 aa13.2□□□□□ -0.3
TRAM1-203ENST00000520700 NPPCP23582 126 aa13.2□□□□□ -0.3
TRAM1-203ENST00000520700 EGFEM1PQ0D2K5 195 aa13.2□□□□□ -0.3
TRAM1-203ENST00000520700 OXLD1Q5BKU9 147 aa13.2□□□□□ -0.3
TRAM1-203ENST00000520700 KPRPQ5T749 579 aaPredicted RBP13.2□□□□□ -0.3
TRAM1-203ENST00000520700 BPIFCQ8NFQ6 507 aa13.2□□□□□ -0.3
TRAM1-203ENST00000520700 RNF125Q96EQ8 232 aa13.2□□□□□ -0.3
TRAM1-203ENST00000520700 ATP5SQ99766 215 aa13.2□□□□□ -0.3
TRAM1-203ENST00000520700 FXYD6-FXYD2A0A087WZ82 144 aa13.19□□□□□ -0.3
TRAM1-203ENST00000520700 IGHV7-4-1A0A0J9YVY3 117 aa13.19□□□□□ -0.3
TRAM1-203ENST00000520700 AGPAT2O15120 278 aa13.19□□□□□ -0.3
TRAM1-203ENST00000520700 IL4P05112 153 aa13.19□□□□□ -0.3
TRAM1-203ENST00000520700 DEFB114Q30KQ6 69 aa13.19□□□□□ -0.3
TRAM1-203ENST00000520700 PXDC1Q5TGL8 231 aa13.19□□□□□ -0.3
TRAM1-203ENST00000520700 BTNL8Q6UX41 500 aa13.19□□□□□ -0.3
TRAM1-203ENST00000520700 TMEM182Q6ZP80 229 aaPredicted RBP13.19□□□□□ -0.3
TRAM1-203ENST00000520700 METTL26Q96S19 204 aa13.19□□□□□ -0.3
TRAM1-203ENST00000520700 MGST2Q99735 147 aa13.19□□□□□ -0.3
TRAM1-203ENST00000520700 NEURL2Q9BR09 285 aa13.19□□□□□ -0.3
TRAM1-203ENST00000520700 VSIRQ9H7M9 311 aa13.19□□□□□ -0.3
TRAM1-203ENST00000520700 hCG_2014768A0A024R1R8 64 aa13.18□□□□□ -0.3
TRAM1-203ENST00000520700 BMI1P35226 326 aa13.18□□□□□ -0.3
TRAM1-203ENST00000520700 RPL29P47914 159 aaKnown RBP13.18□□□□□ -0.3
TRAM1-203ENST00000520700 CAMLGP49069 296 aa13.18□□□□□ -0.3
TRAM1-203ENST00000520700 CLINT1Q14677 625 aa13.18□□□□□ -0.3
TRAM1-203ENST00000520700 USF2Q15853 346 aaPredicted RBP13.18□□□□□ -0.3
TRAM1-203ENST00000520700 WDR61Q9GZS3 305 aaKnown RBP13.18□□□□□ -0.3
TRAM1-203ENST00000520700 IGHV3OR16-8A0A075B7F1 116 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 TRAV25A0A0B4J276 109 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 UBE2L5PA0A1B0GUS4 154 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 A0A1W2PS18 150 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 SMLR1H3BR10 107 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 CHEK1O14757 476 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 CD5P06127 495 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 HNRNPCP07910 306 aaKnown RBP eCLIP13.17□□□□□ -0.34e-6■□□□□ 8.4
TRAM1-203ENST00000520700 PRR20EP86478 221 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 PRR20CP86479 221 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 PRR20DP86480 221 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 PRR20BP86481 221 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 PRR20AP86496 221 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 OR2F1Q13607 317 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 AKAP14Q86UN6 197 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 OR11H4Q8NGC9 324 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 RHPN1-AS1Q9BWJ2 59 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 GGTLC1Q9BX51 225 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 WFDC1Q9HC57 220 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 PFDN2Q9UHV9 154 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 RABAC1Q9UI14 185 aa13.17□□□□□ -0.3
TRAM1-203ENST00000520700 NBEAL1Q6ZS30 2694 aa13.16□□□□□ -0.3
TRAM1-203ENST00000520700 G3V4G9 280 aa13.16□□□□□ -0.3
TRAM1-203ENST00000520700 ZNF207O43670 478 aaKnown RBP13.16□□□□□ -0.3
TRAM1-203ENST00000520700 IFNA5P01569 189 aa13.16□□□□□ -0.3
TRAM1-203ENST00000520700 LINC00869P0C866 280 aa13.16□□□□□ -0.3
TRAM1-203ENST00000520700 EDN2P20800 178 aa13.16□□□□□ -0.3
TRAM1-203ENST00000520700 FGF7P21781 194 aa13.16□□□□□ -0.3
TRAM1-203ENST00000520700 GATA2P23769 480 aaPredicted RBP13.16□□□□□ -0.3
TRAM1-203ENST00000520700 S100A7P31151 101 aa13.16□□□□□ -0.3
TRAM1-203ENST00000520700 EIF2B2P49770 351 aaKnown RBP13.16□□□□□ -0.3
TRAM1-203ENST00000520700 ZNF345Q14585 488 aa13.16□□□□□ -0.3
TRAM1-203ENST00000520700 OPCMLQ14982 345 aa13.16□□□□□ -0.3
TRAM1-203ENST00000520700 BEAN1Q3B7T3 259 aa13.16□□□□□ -0.3
TRAM1-203ENST00000520700 MFFQ9GZY8 342 aa13.16□□□□□ -0.3
TRAM1-203ENST00000520700 TMEM231Q9H6L2 316 aa13.16□□□□□ -0.3
TRAM1-203ENST00000520700 FBXL17Q9UF56 701 aa13.16□□□□□ -0.3
TRAM1-203ENST00000520700 MLXQ9UH92 298 aa13.16□□□□□ -0.3
TRAM1-203ENST00000520700 TAAR5O14804 337 aa13.15□□□□□ -0.3
TRAM1-203ENST00000520700 C1QBP02746 253 aa13.15□□□□□ -0.3
TRAM1-203ENST00000520700 AP2S1P53680 142 aaPredicted RBP13.15□□□□□ -0.3
TRAM1-203ENST00000520700 ZNF266Q14584 549 aa13.15□□□□□ -0.3
TRAM1-203ENST00000520700 NARS2Q96I59 477 aaKnown RBP13.15□□□□□ -0.3
TRAM1-203ENST00000520700 NPCDR1Q9BY65 106 aa13.15□□□□□ -0.3
TRAM1-203ENST00000520700 ARPC5O15511 151 aa13.14□□□□□ -0.31
TRAM1-203ENST00000520700 BUB3O43684 328 aa13.14□□□□□ -0.31
TRAM1-203ENST00000520700 HYPMO75409 117 aa13.14□□□□□ -0.31
TRAM1-203ENST00000520700 APOHP02749 345 aaPredicted RBP13.14□□□□□ -0.31
TRAM1-203ENST00000520700 LYZP61626 148 aa13.14□□□□□ -0.31
TRAM1-203ENST00000520700 CD300EQ496F6 205 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms