RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 AREGP15514 252 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 PTBP1P26599 531 aaKnown RBP eCLIP5.15□□□□□ -1.59
SDCBP-208ENST00000520228 AP3S2P59780 193 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 OR2B8PP59922 312 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 SRPXP78539 464 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 RHOGP84095 191 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 ATP5G2Q06055 141 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 SURF2Q15527 256 aaPredicted RBP5.15□□□□□ -1.59
SDCBP-208ENST00000520228 LCE1EQ5T753 118 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 CCDC71LQ8N9Z2 235 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 NECAP1Q8NC96 275 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 OR51S1Q8NGJ8 323 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 OR6Q1Q8NGQ2 317 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 MRGPRFQ96AM1 343 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 TSC22D3Q99576 134 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 PRRT1Q99946 306 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 CHCHD5Q9BSY4 110 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 PLEKHA3Q9HB20 300 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 MCUBQ9NWR8 336 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 SCP2D1Q9UJQ7 156 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 PRNDQ9UKY0 176 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 C14orf166Q9Y224 244 aaKnown RBP5.15□□□□□ -1.59
SDCBP-208ENST00000520228 ZNF257Q9Y2Q1 563 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 V9GYH0 126 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 TRBV9A0A0B4J1U6 114 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 TEX50A0A1B0GTY4 177 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 FAM223BA6NKX1 122 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 SEC14L6B5MCN3 397 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 B3GALNT1O75752 331 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 ATG12O94817 140 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 IGKV1-39P01597 117 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 PRB2P02812 416 aaPredicted RBP5.14□□□□□ -1.59
SDCBP-208ENST00000520228 IGKV1D-39P04432 117 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 REG1AP05451 166 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 CRYGCP07315 174 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 TRAPPC2P0DI81 140 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 TRAPPC2BP0DI82 140 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 DEFA4P12838 97 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 GATA2P23769 480 aaPredicted RBP5.14□□□□□ -1.59
SDCBP-208ENST00000520228 PSMB6P28072 239 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 FAUP35544 74 aaKnown RBP5.14□□□□□ -1.59
SDCBP-208ENST00000520228 ETV6P41212 452 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 DEFA5Q01523 94 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 ZNF45Q02386 682 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 ZNF79Q15937 498 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 TRIM16LQ309B1 348 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 SP6Q3SY56 376 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 CD164L2Q6UWJ8 174 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 H2BFWTQ7Z2G1 175 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 HSD17B13Q7Z5P4 300 aaPredicted RBP5.14□□□□□ -1.59
SDCBP-208ENST00000520228 FAM223AQ8IWN6 122 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 TOMM5Q8N4H5 51 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 OR1L8Q8NGR8 309 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 OR4A16Q8NH70 328 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 DCUN1D4Q92564 292 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 RASL10AQ92737 203 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 DLX4Q92988 240 aaPredicted RBP5.14□□□□□ -1.59
SDCBP-208ENST00000520228 SEC22AQ96IW7 307 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 SCGB3A2Q96PL1 93 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 TP53RKQ96S44 253 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 RTBDNQ9BSG5 229 aaPredicted RBP5.14□□□□□ -1.59
SDCBP-208ENST00000520228 HINT2Q9BX68 163 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 OCR1Q9BZK8 76 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 SLC2A8Q9NY64 477 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 FKBP11Q9NYL4 201 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 PEF1Q9UBV8 284 aaKnown RBP5.14□□□□□ -1.59
SDCBP-208ENST00000520228 OR51B2Q9Y5P1 312 aa5.14□□□□□ -1.59
SDCBP-208ENST00000520228 IGLC7A0M8Q6 106 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 OVOL1O14753 267 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 CYB5BO43169 146 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 OR2J3O76001 311 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 OR13C7P0DN81 318 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 HIST1H1BP16401 226 aaKnown RBP5.13□□□□□ -1.59
SDCBP-208ENST00000520228 CTRB1P17538 263 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 ZP3P21754 424 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 C15orf32Q32M92 178 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 C9orf66Q5T8R8 295 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 CTRB2Q6GPI1 263 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 THOC7Q6I9Y2 204 aaKnown RBP5.13□□□□□ -1.59
SDCBP-208ENST00000520228 C19orf35Q6ZS72 473 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 GDPD1Q8N9F7 314 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 OR10W1Q8NGF6 305 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 OR5B3Q8NH48 314 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 RNASE8Q8TDE3 154 aaKnown RBP5.13□□□□□ -1.59
SDCBP-208ENST00000520228 LSM10Q969L4 123 aaKnown RBP5.13□□□□□ -1.59
SDCBP-208ENST00000520228 SRRQ9GZT4 340 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 NAA60Q9H7X0 242 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 NDUFA4L2Q9NRX3 87 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 TMEM14BQ9NUH8 114 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 THYN1Q9P016 225 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 ZMAT5Q9UDW3 170 aaKnown RBP5.13□□□□□ -1.59
SDCBP-208ENST00000520228 KCNIP3Q9Y2W7 256 aa5.13□□□□□ -1.59
SDCBP-208ENST00000520228 IGLV11-55A0A075B6I3 123 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.12□□□□□ -1.59
SDCBP-208ENST00000520228 C5orf51A6NDU8 294 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 CRYM-AS1A6NIL9 109 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 CDS2O95674 445 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 IGKV1-5P01602 117 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 TRBV12-3P01733 135 aa5.12□□□□□ -1.59
SDCBP-208ENST00000520228 OR5AC1P0C628 307 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms