RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 DUX3Q96PT4 197 aa10.86□□□□□ -0.67
SDC2-203ENST00000519587 GINS3Q9BRX5 216 aa10.86□□□□□ -0.67
SDC2-203ENST00000519587 NPCDR1Q9BY65 106 aa10.86□□□□□ -0.67
SDC2-203ENST00000519587 WDR61Q9GZS3 305 aaKnown RBP10.86□□□□□ -0.67
SDC2-203ENST00000519587 UFC1Q9Y3C8 167 aa10.86□□□□□ -0.67
SDC2-203ENST00000519587 PUS1Q9Y606 427 aaKnown RBP eCLIP10.86□□□□□ -0.67
SDC2-203ENST00000519587 LGALS9O00182 355 aa10.85□□□□□ -0.67
SDC2-203ENST00000519587 AGPAT2O15120 278 aa10.85□□□□□ -0.67
SDC2-203ENST00000519587 JTBO76095 146 aa10.85□□□□□ -0.67
SDC2-203ENST00000519587 CXCL2P19875 107 aa10.85□□□□□ -0.67
SDC2-203ENST00000519587 S100A7P31151 101 aa10.85□□□□□ -0.67
SDC2-203ENST00000519587 SLURP1P55000 103 aa10.85□□□□□ -0.67
SDC2-203ENST00000519587 TMUB2Q71RG4 321 aa10.85□□□□□ -0.67
SDC2-203ENST00000519587 REC114Q7Z4M0 266 aa10.85□□□□□ -0.67
SDC2-203ENST00000519587 TMEM190Q8WZ59 177 aa10.85□□□□□ -0.67
SDC2-203ENST00000519587 MGST2Q99735 147 aa10.85□□□□□ -0.67
SDC2-203ENST00000519587 GGTLC1Q9BX51 225 aa10.85□□□□□ -0.67
SDC2-203ENST00000519587 PEMTQ9UBM1 199 aa10.85□□□□□ -0.67
SDC2-203ENST00000519587 IGHV3-35A0A0C4DH35 117 aa10.84□□□□□ -0.67
SDC2-203ENST00000519587 ZNF320A2RRD8 509 aa10.84□□□□□ -0.67
SDC2-203ENST00000519587 PSG1P11464 419 aa10.84□□□□□ -0.67
SDC2-203ENST00000519587 BMI1P35226 326 aa10.84□□□□□ -0.67
SDC2-203ENST00000519587 SYNJ2BPP57105 145 aa10.84□□□□□ -0.67
SDC2-203ENST00000519587 ZNF90Q03938 601 aa10.84□□□□□ -0.67
SDC2-203ENST00000519587 KLF5Q13887 457 aaPredicted RBP10.84□□□□□ -0.67
SDC2-203ENST00000519587 OPCMLQ14982 345 aa10.84□□□□□ -0.67
SDC2-203ENST00000519587 PXDC1Q5TGL8 231 aa10.84□□□□□ -0.67
SDC2-203ENST00000519587 S100A7AQ86SG5 101 aa10.84□□□□□ -0.67
SDC2-203ENST00000519587 PPP1R14BQ96C90 147 aa10.84□□□□□ -0.67
SDC2-203ENST00000519587 GNPNAT1Q96EK6 184 aaPredicted RBP10.84□□□□□ -0.67
SDC2-203ENST00000519587 RNF125Q96EQ8 232 aa10.84□□□□□ -0.67
SDC2-203ENST00000519587 NARS2Q96I59 477 aaKnown RBP10.84□□□□□ -0.67
SDC2-203ENST00000519587 C20orf24Q9BUV8 137 aa10.84□□□□□ -0.67
SDC2-203ENST00000519587 WFDC1Q9HC57 220 aa10.84□□□□□ -0.67
SDC2-203ENST00000519587 DAZ1Q9NQZ3 744 aaKnown RBP10.84□□□□□ -0.67
SDC2-203ENST00000519587 PFDN2Q9UHV9 154 aa10.84□□□□□ -0.67
SDC2-203ENST00000519587 A8MWP6 167 aa10.83□□□□□ -0.68
SDC2-203ENST00000519587 OVOL1O14753 267 aa10.83□□□□□ -0.68
SDC2-203ENST00000519587 TSPAN15O95858 294 aa10.83□□□□□ -0.68
SDC2-203ENST00000519587 IL4P05112 153 aa10.83□□□□□ -0.68
SDC2-203ENST00000519587 HNRNPCP07910 306 aaKnown RBP eCLIP10.83□□□□□ -0.681e-6■■■■□ 19.7
SDC2-203ENST00000519587 LINC00869P0C866 280 aa10.83□□□□□ -0.68
SDC2-203ENST00000519587 RPL29P47914 159 aaKnown RBP10.83□□□□□ -0.68
SDC2-203ENST00000519587 ELLP55199 621 aaPredicted RBP10.83□□□□□ -0.68
SDC2-203ENST00000519587 LYZP61626 148 aa10.83□□□□□ -0.68
SDC2-203ENST00000519587 LGALSLQ3ZCW2 172 aaPredicted RBP10.83□□□□□ -0.68
SDC2-203ENST00000519587 RPL7L1Q6DKI1 246 aaKnown RBP10.83□□□□□ -0.68
SDC2-203ENST00000519587 TOMM20LQ6UXN7 152 aa10.83□□□□□ -0.68
SDC2-203ENST00000519587 C9orf62Q8N4C0 152 aa10.83□□□□□ -0.68
SDC2-203ENST00000519587 STPG3Q8N7X2 389 aa10.83□□□□□ -0.68
SDC2-203ENST00000519587 METTL26Q96S19 204 aa10.83□□□□□ -0.68
SDC2-203ENST00000519587 ELOVL1Q9BW60 279 aa10.83□□□□□ -0.68
SDC2-203ENST00000519587 ZNF471Q9BX82 626 aaPredicted RBP10.83□□□□□ -0.68
SDC2-203ENST00000519587 SLC45A2Q9UMX9 530 aa10.83□□□□□ -0.68
SDC2-203ENST00000519587 TIMM9Q9Y5J7 89 aa10.83□□□□□ -0.68
SDC2-203ENST00000519587 B2MP61769 119 aa10.82□□□□□ -0.68
SDC2-203ENST00000519587 Q6ZRG5 221 aa10.82□□□□□ -0.68
SDC2-203ENST00000519587 LINC00482Q8N8I6 264 aa10.82□□□□□ -0.68
SDC2-203ENST00000519587 HSD17B11Q8NBQ5 300 aa10.82□□□□□ -0.68
SDC2-203ENST00000519587 OR9G4Q8NGQ1 327 aa10.82□□□□□ -0.68
SDC2-203ENST00000519587 DLX4Q92988 240 aaPredicted RBP10.82□□□□□ -0.68
SDC2-203ENST00000519587 MARC2Q969Z3 335 aa10.82□□□□□ -0.68
SDC2-203ENST00000519587 PSMG3Q9BT73 122 aaPredicted RBP10.82□□□□□ -0.68
SDC2-203ENST00000519587 PBDC1Q9BVG4 233 aa10.82□□□□□ -0.68
SDC2-203ENST00000519587 ZFAND3Q9H8U3 227 aa10.82□□□□□ -0.68
SDC2-203ENST00000519587 PXMP4Q9Y6I8 212 aa10.82□□□□□ -0.68
SDC2-203ENST00000519587 MGAM2Q2M2H8 2515 aa10.81□□□□□ -0.68
SDC2-203ENST00000519587 WI2-2373I1.2A0A1W2PRP0 233 aa10.81□□□□□ -0.68
SDC2-203ENST00000519587 BOLA2-SMG1P6H3BVE0 249 aa10.81□□□□□ -0.68
SDC2-203ENST00000519587 K7EMT4 169 aa10.81□□□□□ -0.68
SDC2-203ENST00000519587 COX7A2P2O60397 106 aa10.81□□□□□ -0.68
SDC2-203ENST00000519587 TPT1P13693 172 aaKnown RBP10.81□□□□□ -0.68
SDC2-203ENST00000519587 NKX2-5P52952 324 aaPredicted RBP10.81□□□□□ -0.68
SDC2-203ENST00000519587 MIC13Q5XKP0 118 aa10.81□□□□□ -0.68
SDC2-203ENST00000519587 UNQ9165/PRO28630Q6UXU0 137 aa10.81□□□□□ -0.68
SDC2-203ENST00000519587 OR1L4Q8NGR5 311 aa10.81□□□□□ -0.68
SDC2-203ENST00000519587 RCC1LQ96I51 464 aaKnown RBP10.81□□□□□ -0.68
SDC2-203ENST00000519587 PFDN5Q99471 154 aa10.81□□□□□ -0.68
SDC2-203ENST00000519587 RSG1Q9BU20 258 aa10.81□□□□□ -0.68
SDC2-203ENST00000519587 TMEM231Q9H6L2 316 aa10.81□□□□□ -0.68
SDC2-203ENST00000519587 SLC39A9Q9NUM3 307 aa10.81□□□□□ -0.68
SDC2-203ENST00000519587 RABAC1Q9UI14 185 aa10.81□□□□□ -0.68
SDC2-203ENST00000519587 RNF24Q9Y225 148 aa10.81□□□□□ -0.68
SDC2-203ENST00000519587 ELOA3CA0A087WX78 387 aaPredicted RBP10.8□□□□□ -0.68
SDC2-203ENST00000519587 HYPMO75409 117 aa10.8□□□□□ -0.68
SDC2-203ENST00000519587 CD33P20138 364 aa10.8□□□□□ -0.68
SDC2-203ENST00000519587 NPPCP23582 126 aa10.8□□□□□ -0.68
SDC2-203ENST00000519587 PRR20EP86478 221 aa10.8□□□□□ -0.68
SDC2-203ENST00000519587 PRR20CP86479 221 aa10.8□□□□□ -0.68
SDC2-203ENST00000519587 PRR20DP86480 221 aa10.8□□□□□ -0.68
SDC2-203ENST00000519587 PRR20BP86481 221 aa10.8□□□□□ -0.68
SDC2-203ENST00000519587 PRR20AP86496 221 aa10.8□□□□□ -0.68
SDC2-203ENST00000519587 SLC51BQ86UW2 128 aa10.8□□□□□ -0.68
SDC2-203ENST00000519587 OR1B1Q8NGR6 318 aa10.8□□□□□ -0.68
SDC2-203ENST00000519587 STOML3Q8TAV4 291 aa10.8□□□□□ -0.68
SDC2-203ENST00000519587 GRAMD2BQ96HH9 432 aa10.8□□□□□ -0.68
SDC2-203ENST00000519587 MCRIP2Q9BUT9 160 aaKnown RBP10.8□□□□□ -0.68
SDC2-203ENST00000519587 CYTL1Q9NRR1 136 aa10.8□□□□□ -0.68
SDC2-203ENST00000519587 HIGD1AQ9Y241 93 aa10.8□□□□□ -0.68
SDC2-203ENST00000519587 IGHV3OR16-8A0A075B7F1 116 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms