RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 PPP1R1CQ8WVI7 109 aa17.04■□□□□ 0.32
SKP1-206ENST00000519321 CRYBB3P26998 211 aa17.03■□□□□ 0.32
SKP1-206ENST00000519321 SULT1A1P50225 295 aa17.03■□□□□ 0.32
SKP1-206ENST00000519321 RRAS2P62070 204 aaPredicted RBP17.03■□□□□ 0.32
SKP1-206ENST00000519321 ZNF90Q03938 601 aa17.03■□□□□ 0.32
SKP1-206ENST00000519321 DEFB121Q5J5C9 76 aa17.03■□□□□ 0.32
SKP1-206ENST00000519321 TMEM252Q8N6L7 170 aa17.03■□□□□ 0.32
SKP1-206ENST00000519321 SLC25A31Q9H0C2 315 aa17.03■□□□□ 0.32
SKP1-206ENST00000519321 VSIRQ9H7M9 311 aa17.03■□□□□ 0.32
SKP1-206ENST00000519321 PFDN2Q9UHV9 154 aa17.03■□□□□ 0.32
SKP1-206ENST00000519321 IGKV1OR2-108A0A075B7D4 117 aa17.02■□□□□ 0.32
SKP1-206ENST00000519321 ZNF785A8K8V0 405 aa17.02■□□□□ 0.32
SKP1-206ENST00000519321 HNRNPCP07910 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
SKP1-206ENST00000519321 P2RY1P47900 373 aa17.02■□□□□ 0.32
SKP1-206ENST00000519321 HBG1P69891 147 aa17.02■□□□□ 0.32
SKP1-206ENST00000519321 HBG2P69892 147 aa17.02■□□□□ 0.32
SKP1-206ENST00000519321 RNF125Q96EQ8 232 aa17.02■□□□□ 0.32
SKP1-206ENST00000519321 WDR89Q96FK6 387 aaPredicted RBP17.02■□□□□ 0.32
SKP1-206ENST00000519321 GRAMD2BQ96HH9 432 aa17.02■□□□□ 0.32
SKP1-206ENST00000519321 TSPAN4O14817 238 aa17.01■□□□□ 0.31
SKP1-206ENST00000519321 S100A11P31949 105 aa17.01■□□□□ 0.31
SKP1-206ENST00000519321 NUP62P37198 522 aaPredicted RBP17.01■□□□□ 0.31
SKP1-206ENST00000519321 SLC38A11Q08AI6 406 aa17.01■□□□□ 0.31
SKP1-206ENST00000519321 ARL16Q0P5N6 197 aa17.01■□□□□ 0.31
SKP1-206ENST00000519321 TEPPQ6URK8 271 aa17.01■□□□□ 0.31
SKP1-206ENST00000519321 ASB13Q8WXK3 278 aa17.01■□□□□ 0.31
SKP1-206ENST00000519321 SPAG8Q99932 426 aaPredicted RBP17.01■□□□□ 0.31
SKP1-206ENST00000519321 RABAC1Q9UI14 185 aa17.01■□□□□ 0.31
SKP1-206ENST00000519321 LSM4Q9Y4Z0 139 aaKnown RBP17.01■□□□□ 0.31
SKP1-206ENST00000519321 SMAD5-AS1Q9Y6J3 95 aa17.01■□□□□ 0.31
SKP1-206ENST00000519321 IGHV3-49A0A0A0MS15 119 aa17■□□□□ 0.31
SKP1-206ENST00000519321 CST7O76096 145 aa17■□□□□ 0.31
SKP1-206ENST00000519321 MPC2O95563 127 aa17■□□□□ 0.31
SKP1-206ENST00000519321 CXCL3P19876 107 aa17■□□□□ 0.31
SKP1-206ENST00000519321 FCN2Q15485 313 aa17■□□□□ 0.31
SKP1-206ENST00000519321 BPIFCQ8NFQ6 507 aa17■□□□□ 0.31
SKP1-206ENST00000519321 ST8SIA2Q92186 375 aa17■□□□□ 0.31
SKP1-206ENST00000519321 RNF2Q99496 336 aa17■□□□□ 0.31
SKP1-206ENST00000519321 IGHV3OR16-13A0A075B7E8 117 aa16.99■□□□□ 0.31
SKP1-206ENST00000519321 IGHV3-74A0A0B4J1X5 117 aa16.99■□□□□ 0.31
SKP1-206ENST00000519321 IGSF23A1L1A6 192 aa16.99■□□□□ 0.31
SKP1-206ENST00000519321 SELENOTP62341 195 aa16.99■□□□□ 0.31
SKP1-206ENST00000519321 USF2Q15853 346 aaPredicted RBP16.99■□□□□ 0.31
SKP1-206ENST00000519321 ATP6V1FQ16864 119 aa16.99■□□□□ 0.31
SKP1-206ENST00000519321 LILRB2Q8N423 598 aa16.99■□□□□ 0.31
SKP1-206ENST00000519321 TMEM217Q8N7C4 229 aa16.99■□□□□ 0.31
SKP1-206ENST00000519321 PBDC1Q9BVG4 233 aa16.99■□□□□ 0.31
SKP1-206ENST00000519321 OR5AC2Q9NZP5 309 aa16.99■□□□□ 0.31
SKP1-206ENST00000519321 SELENOKQ9Y6D0 94 aa16.99■□□□□ 0.31
SKP1-206ENST00000519321 U3KQE9 123 aa16.99■□□□□ 0.31
SKP1-206ENST00000519321 H0YIZ8 118 aa16.98■□□□□ 0.31
SKP1-206ENST00000519321 APOHP02749 345 aaPredicted RBP16.98■□□□□ 0.31
SKP1-206ENST00000519321 S100A7P31151 101 aa16.98■□□□□ 0.31
SKP1-206ENST00000519321 EIF2B2P49770 351 aaKnown RBP16.98■□□□□ 0.31
SKP1-206ENST00000519321 LYZP61626 148 aa16.98■□□□□ 0.31
SKP1-206ENST00000519321 OR2F1Q13607 317 aa16.98■□□□□ 0.31
SKP1-206ENST00000519321 CYP2G1PQ6ZSU1 146 aa16.98■□□□□ 0.31
SKP1-206ENST00000519321 TCF24Q7RTU0 167 aa16.98■□□□□ 0.31
SKP1-206ENST00000519321 OR11H7Q8NGC8 314 aa16.98■□□□□ 0.31
SKP1-206ENST00000519321 OR4C46A6NHA9 309 aa16.97■□□□□ 0.31
SKP1-206ENST00000519321 CD81P60033 236 aa16.97■□□□□ 0.31
SKP1-206ENST00000519321 PAFAH1B2P68402 229 aa16.97■□□□□ 0.31
SKP1-206ENST00000519321 BAXQ07812 192 aa16.97■□□□□ 0.31
SKP1-206ENST00000519321 FAM90A2PQ658T7 463 aa16.97■□□□□ 0.31
SKP1-206ENST00000519321 Q8N1Y9 231 aa16.97■□□□□ 0.31
SKP1-206ENST00000519321 NEURL2Q9BR09 285 aa16.97■□□□□ 0.31
SKP1-206ENST00000519321 RNF126Q9BV68 326 aa16.97■□□□□ 0.31
SKP1-206ENST00000519321 UQCC1Q9NVA1 299 aa16.97■□□□□ 0.31
SKP1-206ENST00000519321 RAB31Q13636 194 aa16.96■□□□□ 0.31
SKP1-206ENST00000519321 THAP6Q8TBB0 222 aa16.96■□□□□ 0.31
SKP1-206ENST00000519321 TMEM147Q9BVK8 224 aa16.96■□□□□ 0.31
SKP1-206ENST00000519321 SLC45A2Q9UMX9 530 aa16.96■□□□□ 0.31
SKP1-206ENST00000519321 DNAH3Q8TD57 4116 aa16.95■□□□□ 0.3
SKP1-206ENST00000519321 IGHV3-66A0A0C4DH42 116 aa16.95■□□□□ 0.3
SKP1-206ENST00000519321 HELTA6NFD8 242 aa16.95■□□□□ 0.3
SKP1-206ENST00000519321 DFFBO76075 338 aa16.95■□□□□ 0.3
SKP1-206ENST00000519321 GIPP09681 153 aaPredicted RBP16.95■□□□□ 0.3
SKP1-206ENST00000519321 AP2S1P53680 142 aaPredicted RBP16.95■□□□□ 0.3
SKP1-206ENST00000519321 EWSR1Q01844 656 aaKnown RBP eCLIP16.95■□□□□ 0.3
SKP1-206ENST00000519321 FGL1Q08830 312 aa16.95■□□□□ 0.3
SKP1-206ENST00000519321 VWC2Q2TAL6 325 aa16.95■□□□□ 0.3
SKP1-206ENST00000519321 BUB3O43684 328 aa16.94■□□□□ 0.3
SKP1-206ENST00000519321 RPL11P62913 178 aaKnown RBP16.94■□□□□ 0.3
SKP1-206ENST00000519321 C16orf54Q6UWD8 224 aa16.94■□□□□ 0.3
SKP1-206ENST00000519321 S100A7AQ86SG5 101 aa16.94■□□□□ 0.3
SKP1-206ENST00000519321 ZNF546Q86UE3 836 aa16.94■□□□□ 0.3
SKP1-206ENST00000519321 TRAV2A0A0B4J234 112 aa16.93■□□□□ 0.3
SKP1-206ENST00000519321 A8MZ25 164 aa16.93■□□□□ 0.3
SKP1-206ENST00000519321 CD7P09564 240 aa16.93■□□□□ 0.3
SKP1-206ENST00000519321 CMC4P56277 68 aaPredicted RBP16.93■□□□□ 0.3
SKP1-206ENST00000519321 NHLH2Q02577 135 aa16.93■□□□□ 0.3
SKP1-206ENST00000519321 PPP1R14BQ96C90 147 aa16.93■□□□□ 0.3
SKP1-206ENST00000519321 MBD2Q9UBB5 411 aa16.93■□□□□ 0.3
SKP1-206ENST00000519321 DNASE2O00115 360 aaPredicted RBP16.92■□□□□ 0.3
SKP1-206ENST00000519321 AGPAT2O15120 278 aa16.92■□□□□ 0.3
SKP1-206ENST00000519321 LYL1P12980 280 aa16.92■□□□□ 0.3
SKP1-206ENST00000519321 GATA2P23769 480 aaPredicted RBP16.92■□□□□ 0.3
SKP1-206ENST00000519321 RAP2BP61225 183 aa16.92■□□□□ 0.3
SKP1-206ENST00000519321 PXDC1Q5TGL8 231 aa16.92■□□□□ 0.3
SKP1-206ENST00000519321 TMEM182Q6ZP80 229 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms