RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 WFDC6Q9BQY6 131 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 ANAPC13Q9BS18 74 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 DPY30Q9C005 99 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 TAS2R5Q9NYW4 299 aa2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 C14orf166Q9Y224 244 aaKnown RBP2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 ZNF443Q9Y2A4 671 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P23-201ENST00000518743 A0A1B0GXF2 115 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 GGT3PA6NGU5 568 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 FAM183AA6NL82 134 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 SMIM23A6NLE4 172 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 GYG2O15488 501 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 FGF16O43320 207 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 OR2T1O43869 369 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 MPZL2O60487 215 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 HPGDSO60760 199 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 PDCD6O75340 191 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 DHRS3O75911 302 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 S100A6P06703 90 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 MLNP12872 115 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 GUCA1AP43080 201 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 RPL14P50914 215 aaKnown RBP2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 PCBD1P61457 104 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 FAM3AP98173 230 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 MEF2CQ06413 473 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 COX19Q49B96 90 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 FAM104BQ5XKR9 115 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 PRSS54Q6PEW0 395 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 FA2HQ7L5A8 372 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 OR11H6Q8NGC7 330 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 OR4P4Q8NGL7 312 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 OR11H2Q8NH07 326 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 CIRBP-AS1Q8TBR5 109 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 SLC7A6Q92536 515 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 C12orf43Q96C57 262 aaKnown RBP2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 GPR82Q96P67 336 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 RBP7Q96R05 134 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 OR7D2Q96RA2 312 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 SPIN2AQ99865 258 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 SPIN2BQ9BPZ2 258 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 THTPAQ9BU02 230 aa2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 MACF1Q9UPN3 7388 aaKnown RBP2.88□□□□□ -1.95
HMGB1P23-201ENST00000518743 LPAP08519 4548 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 IGKV2D-24A0A075B6R9 120 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 A0A087WUJ7 227 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 TRAV8-3A0A0A6YYJ7 113 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 IGHV2-26A0A0B4J1V2 119 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 C7orf66A4D0T2 115 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 ZNF850A8MQ14 1090 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 ZNF816Q0VGE8 651 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 GLYATQ6IB77 296 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 TTC33Q6PID6 262 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 UNQ9165/PRO28630Q6UXU0 137 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 FUNDC1Q8IVP5 155 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 ZNF676Q8N7Q3 588 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 SPANXA2-OT1Q8N9U9 137 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 ZNF555Q8NEP9 628 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 OR2K2Q8NGT1 345 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 OR2T27Q8NH04 317 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 OR8S1Q8NH09 359 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 STOML3Q8TAV4 291 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 TWIST2Q8WVJ9 160 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 C1orf54Q8WWF1 131 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 PPCDCQ96CD2 204 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 FMC1Q96HJ9 113 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 TEX37Q96LM6 180 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 TMEM56Q96MV1 263 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 METTL9Q9H1A3 318 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 TXNIPQ9H3M7 391 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 GUCA1BQ9UMX6 200 aa2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 POLR3HQ9Y535 204 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P23-201ENST00000518743 LOC102725191A0A1B0GVB3 256 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 LEUTXA8MZ59 168 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 CCNKO75909 580 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 CXorf1O96002 111 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 MT1HL1P0DM35 61 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 GNA13Q14344 377 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 DNAL1Q4LDG9 190 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 LCN8Q6JVE9 175 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 DRAM2Q6UX65 266 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 C4orf22Q6V702 233 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 LINC00337Q8N6G1 96 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 SLC35G3Q8N808 338 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 MYOZ3Q8TDC0 251 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 APOBEC3DQ96AK3 386 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 SLC25A44Q96H78 314 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 LINC00477Q96M19 166 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 FAM210AQ96ND0 272 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 MARVELD1Q9BSK0 173 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 TMEM70Q9BUB7 260 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 SCRT1Q9BWW7 348 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 SLC22A4Q9H015 551 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 DPH3P1Q9H4G8 78 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 POPDC3Q9HBV1 291 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 WFDC1Q9HC57 220 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 INIPQ9NRY2 104 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 TAS2R7Q9NYW3 318 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 NAGKQ9UJ70 344 aa2.86□□□□□ -1.95
HMGB1P23-201ENST00000518743 DAPL1A0PJW8 107 aa2.85□□□□□ -1.95
HMGB1P23-201ENST00000518743 FAAHO00519 579 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms