RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 UBE2V1Q13404 147 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 GNMTQ14749 295 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 RSU1Q15404 277 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 SURF2Q15527 256 aaPredicted RBP4.45□□□□□ -1.7
PABPC1-207ENST00000518716 MPV17LQ2QL34 196 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 COL5A1-AS1Q5SY13 56 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 ATRAIDQ6UW56 229 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 UNQ5815/PRO19632Q6UWF5 114 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 SIGLEC15Q6ZMC9 328 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 C5orf24Q7Z6I8 188 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 LINC00596Q86U02 117 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 KIR2DL5AQ8N109 375 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 OR10V1Q8NGI7 309 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 OR51A2Q8NGJ7 313 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 OR52I2Q8NH67 350 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 KIR2DL5BQ8NHK3 375 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 PELI1Q96FA3 418 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 CENPNQ96H22 339 aaPredicted RBP4.45□□□□□ -1.7
PABPC1-207ENST00000518716 CYYR1Q96J86 154 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 RNF5Q99942 180 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 AGMATQ9BSE5 352 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 ABHD14AQ9BUJ0 271 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 IFI27L2Q9H2X8 130 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 GNG12Q9UBI6 72 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 TP53TG1Q9Y2A0 90 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 KLK5Q9Y337 293 aaPredicted RBP4.45□□□□□ -1.7
PABPC1-207ENST00000518716 AK6Q9Y3D8 172 aaKnown RBP4.45□□□□□ -1.7
PABPC1-207ENST00000518716 A3GALT2U3KPV4 340 aa4.45□□□□□ -1.7
PABPC1-207ENST00000518716 DNAH5Q8TE73 4624 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 A0A0G2JLM5 398 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 PNMA8CA0A1B0GUJ8 204 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 A0A1W2PP11 408 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 H3BTX0 84 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 AIPO00170 330 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 SPINT2O43291 252 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 YPEL1O60688 119 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 MRPS14O60783 128 aaKnown RBP4.44□□□□□ -1.7
PABPC1-207ENST00000518716 ATG12O94817 140 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 CDRT1O95170 752 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 UCHL1P09936 223 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 SMIM18P0DKX4 95 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 HOXB6P17509 224 aaKnown RBP4.44□□□□□ -1.7
PABPC1-207ENST00000518716 PPP1CCP36873 323 aaKnown RBP4.44□□□□□ -1.7
PABPC1-207ENST00000518716 RHEBQ15382 184 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 TMEM241Q24JQ0 296 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 C6orf141Q5SZD1 244 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 KDM4DQ6B0I6 523 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 EIF5AL1Q6IS14 154 aaKnown RBP4.44□□□□□ -1.7
PABPC1-207ENST00000518716 PRR27Q6MZM9 219 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 Q6ZWC4 215 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 PHLDA1Q8WV24 401 aaPredicted RBP4.44□□□□□ -1.7
PABPC1-207ENST00000518716 DEDD2Q8WXF8 326 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 YPEL2Q96QA6 119 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 GGTLC1Q9BX51 225 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 QTRT1Q9BXR0 403 aaKnown RBP4.44□□□□□ -1.7
PABPC1-207ENST00000518716 TMEM126AQ9H061 195 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 PARP12Q9H0J9 701 aaKnown RBP4.44□□□□□ -1.7
PABPC1-207ENST00000518716 TAF9BQ9HBM6 251 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 DNAJC4Q9NNZ3 241 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 DKK2Q9UBU2 259 aa4.44□□□□□ -1.7
PABPC1-207ENST00000518716 TMEM218A2RU14 115 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 BMPR1BO00238 502 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 GNGT2O14610 69 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 CRXO43186 299 aaPredicted RBP4.43□□□□□ -1.7
PABPC1-207ENST00000518716 CA11O75493 328 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 NDUFB8O95169 186 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 TOMM40O96008 361 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 IGKV1-16P04430 117 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 SMIM17P0DL12 118 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 SULT1A3P0DMM9 295 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 SULT1A4P0DMN0 295 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 PSG1P11464 419 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 EDN2P20800 178 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 FASP25445 335 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 POLR2IP36954 125 aaKnown RBP4.43□□□□□ -1.7
PABPC1-207ENST00000518716 RPL13AP40429 203 aaKnown RBP4.43□□□□□ -1.7
PABPC1-207ENST00000518716 LGALS7P47929 136 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 TAS2R43P59537 309 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 FOXI1Q12951 378 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 EXOSC2Q13868 293 aaKnown RBP4.43□□□□□ -1.7
PABPC1-207ENST00000518716 MRGPRG-AS1Q2M3A8 158 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 LINC01620Q4KN68 170 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 SLC25A30Q5SVS4 291 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 LINC00336Q6ZUF6 198 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 CCDC190Q86UF4 302 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 OR1L6Q8NGR2 347 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 Q8WTZ3 238 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 ORAI1Q96D31 301 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 USMG5Q96IX5 58 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 SMIM8Q96KF7 97 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 OR10C1Q96KK4 312 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 C20orf144Q9BQM9 153 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 FAAP24Q9BTP7 215 aa4.43□□□□□ -1.7
PABPC1-207ENST00000518716 TECRQ9NZ01 308 aaKnown RBP4.43□□□□□ -1.7
PABPC1-207ENST00000518716 TRAV30A0A087WSZ9 112 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 A0A087WXM4 84 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 LOC102724200A0A096LPH7 203 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-207ENST00000518716 TCRBV3S1A0A5B6 114 aa4.42□□□□□ -1.7
PABPC1-207ENST00000518716 C2orf70A6NJV1 201 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms