RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 C8orf88P0DMB2 117 aa7.5□□□□□ -1.21
CLN8-202ENST00000517514 RELQ04864 619 aaPredicted RBP7.5□□□□□ -1.21
CLN8-202ENST00000517514 OPCMLQ14982 345 aa7.5□□□□□ -1.21
CLN8-202ENST00000517514 USF2Q15853 346 aaPredicted RBP7.5□□□□□ -1.21
CLN8-202ENST00000517514 LGALSLQ3ZCW2 172 aaPredicted RBP7.5□□□□□ -1.21
CLN8-202ENST00000517514 LAMTOR1Q6IAA8 161 aa7.5□□□□□ -1.21
CLN8-202ENST00000517514 TEPPQ6URK8 271 aa7.5□□□□□ -1.21
CLN8-202ENST00000517514 BTNL8Q6UX41 500 aa7.5□□□□□ -1.21
CLN8-202ENST00000517514 CYP2G1PQ6ZSU1 146 aa7.5□□□□□ -1.21
CLN8-202ENST00000517514 KCNRGQ8N5I3 272 aa7.5□□□□□ -1.21
CLN8-202ENST00000517514 OR9G4Q8NGQ1 327 aa7.5□□□□□ -1.21
CLN8-202ENST00000517514 ATP5SQ99766 215 aa7.5□□□□□ -1.21
CLN8-202ENST00000517514 WDR61Q9GZS3 305 aaKnown RBP7.5□□□□□ -1.21
CLN8-202ENST00000517514 MFFQ9GZY8 342 aa7.5□□□□□ -1.21
CLN8-202ENST00000517514 U3KQE9 123 aa7.5□□□□□ -1.21
CLN8-202ENST00000517514 NBEAL1Q6ZS30 2694 aa7.5□□□□□ -1.21
CLN8-202ENST00000517514 ZNF320A2RRD8 509 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 K7EMT4 169 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 RD3LP0DJH9 198 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 IGLL1P15814 213 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 FGF7P21781 194 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 EIF2B2P49770 351 aaKnown RBP7.49□□□□□ -1.21
CLN8-202ENST00000517514 AP2S1P53680 142 aaPredicted RBP7.49□□□□□ -1.21
CLN8-202ENST00000517514 PLP1P60201 277 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 PRR20EP86478 221 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 PRR20CP86479 221 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 PRR20DP86480 221 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 PRR20BP86481 221 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 PRR20AP86496 221 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 FAM106AQ4KMX7 169 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 PATE2Q6UY27 113 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 OR51G1Q8NGK1 321 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 PARD6GQ9BYG4 376 aaPredicted RBP7.49□□□□□ -1.21
CLN8-202ENST00000517514 SELENOKQ9Y6D0 94 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 NOTCH3Q9UM47 2321 aa7.49□□□□□ -1.21
CLN8-202ENST00000517514 WIPF1O43516 503 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 YIF1AO95070 293 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 IL4P05112 153 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 FOLR2P14207 255 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 CBLN1P23435 193 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 CRYBB3P26998 211 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 CAMLGP49069 296 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 ELLP55199 621 aaPredicted RBP7.48□□□□□ -1.21
CLN8-202ENST00000517514 ZNF345Q14585 488 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 MIC13Q5XKP0 118 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 RPL7L1Q6DKI1 246 aaKnown RBP7.48□□□□□ -1.21
CLN8-202ENST00000517514 INO80EQ8NBZ0 244 aaPredicted RBP7.48□□□□□ -1.21
CLN8-202ENST00000517514 BPIFCQ8NFQ6 507 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 Q8WTZ3 238 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 RNF125Q96EQ8 232 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 RSG1Q9BU20 258 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 C20orf24Q9BUV8 137 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 NPCDR1Q9BY65 106 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 SIGLEC8Q9NYZ4 499 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 MRPL27Q9P0M9 148 aaKnown RBP7.48□□□□□ -1.21
CLN8-202ENST00000517514 MLXQ9UH92 298 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 MGAM2Q2M2H8 2515 aa7.48□□□□□ -1.21
CLN8-202ENST00000517514 IGHV3OR16-13A0A075B7E8 117 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 IGHV3-49A0A0A0MS15 119 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 IGHV3-74A0A0B4J1X5 117 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 IGHV7-4-1A0A0J9YVY3 117 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 IZUMO1RA6ND01 250 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 SEC14L6B5MCN3 397 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 DFFBO76075 338 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 CD33P20138 364 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 NUP62P37198 522 aaPredicted RBP7.47□□□□□ -1.21
CLN8-202ENST00000517514 RPL29P47914 159 aaKnown RBP7.47□□□□□ -1.21
CLN8-202ENST00000517514 NKX2-5P52952 324 aaPredicted RBP7.47□□□□□ -1.21
CLN8-202ENST00000517514 OXLD1Q5BKU9 147 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 TMUB2Q71RG4 321 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 C9orf62Q8N4C0 152 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 TMEM37Q8WXS4 190 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 HYLS1Q96M11 299 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 ARV1Q9H2C2 271 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 VSIRQ9H7M9 311 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 DAZ1Q9NQZ3 744 aaKnown RBP7.47□□□□□ -1.21
CLN8-202ENST00000517514 PLA2G2EQ9NZK7 142 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 SMPXQ9UHP9 88 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 UFC1Q9Y3C8 167 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 PXMP4Q9Y6I8 212 aa7.47□□□□□ -1.21
CLN8-202ENST00000517514 IGHV3-66A0A0C4DH42 116 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 G3V4G9 280 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 CHEK1O14757 476 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 MPDU1O75352 247 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 IGLV1-51P01701 117 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 LYZP61626 148 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 SELENOTP62341 195 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 DEFB114Q30KQ6 69 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 GCSAMLQ5JQS6 135 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 SAMD5Q5TGI4 173 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 MORN5Q5VZ52 161 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 FAM90A2PQ658T7 463 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 ST8SIA2Q92186 375 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 C17orf77Q96MU5 243 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 SH3BGRL3Q9H299 93 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 DOK5Q9P104 306 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 NOTCH1P46531 2555 aa7.46□□□□□ -1.22
CLN8-202ENST00000517514 A0A0D9SG52 128 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 H3BRN7 92 aa7.45□□□□□ -1.22
CLN8-202ENST00000517514 BOLA2-SMG1P6H3BVE0 249 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms