RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 POLEQ07864 2286 aa7.84□□□□□ -1.15
VCAN-210ENST00000513960 C2orf70A6NJV1 201 aa7.84□□□□□ -1.15
VCAN-210ENST00000513960 A8MWL6 223 aa7.84□□□□□ -1.15
VCAN-210ENST00000513960 APOHP02749 345 aaPredicted RBP7.84□□□□□ -1.15
VCAN-210ENST00000513960 TMEM249Q2WGJ8 235 aa7.84□□□□□ -1.15
VCAN-210ENST00000513960 UTF1Q5T230 341 aa7.84□□□□□ -1.15
VCAN-210ENST00000513960 PRNTQ86SH4 94 aa7.84□□□□□ -1.15
VCAN-210ENST00000513960 C15orf65H3BRN8 121 aa7.84□□□□□ -1.16
VCAN-210ENST00000513960 PROP1O75360 226 aa7.84□□□□□ -1.16
VCAN-210ENST00000513960 LIPFP07098 398 aa7.84□□□□□ -1.16
VCAN-210ENST00000513960 HIST1H1AQ02539 215 aaPredicted RBP7.84□□□□□ -1.16
VCAN-210ENST00000513960 OR1N2Q8NGR9 330 aa7.84□□□□□ -1.16
VCAN-210ENST00000513960 SLC25A33Q9BSK2 321 aa7.84□□□□□ -1.16
VCAN-210ENST00000513960 PRNDQ9UKY0 176 aa7.84□□□□□ -1.16
VCAN-210ENST00000513960 HCFC1P51610 2035 aa7.84□□□□□ -1.16
VCAN-210ENST00000513960 GVINP1Q7Z2Y8 2422 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 IGKV1D-17A0A075B6S4 117 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.83□□□□□ -1.16
VCAN-210ENST00000513960 MBD3L4A6NDZ8 208 aaPredicted RBP7.83□□□□□ -1.16
VCAN-210ENST00000513960 MBD3L3A6NE82 208 aaPredicted RBP7.83□□□□□ -1.16
VCAN-210ENST00000513960 MBD3L5A6NJ08 208 aaPredicted RBP7.83□□□□□ -1.16
VCAN-210ENST00000513960 HCP5Q6MZN7 132 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 FAM90A1Q86YD7 464 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 DEFB125Q8N687 156 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 FAM169BQ8N8A8 192 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 MBD3L2Q8NHZ7 208 aaPredicted RBP7.83□□□□□ -1.16
VCAN-210ENST00000513960 HARBI1Q96MB7 349 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 RAB9BQ9NP90 201 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 IDI2-AS1Q9NZ38 188 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 A6NDN8 102 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 PPBPP02775 128 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 TMEM97Q5BJF2 176 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 TIMM23BQ5SRD1 257 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 C10orf55Q5SWW7 151 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 LINC00305Q7Z4B0 112 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 GCSAMQ8N6F7 178 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 FER1L6-AS1Q8NA97 138 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 ZNF503Q96F45 646 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 YLPM1P49750 1951 aaKnown RBP7.83□□□□□ -1.16
VCAN-210ENST00000513960 NBEAQ8NFP9 2946 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 TRAV8-1A0A0A6YYK1 113 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 IGLV2-8P01709 118 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 FCER1GP30273 86 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 KIR2DS2P43631 304 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 PRR20EP86478 221 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 PRR20CP86479 221 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 PRR20DP86480 221 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 PRR20BP86481 221 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 PRR20AP86496 221 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 IFI27L2Q9H2X8 130 aa7.83□□□□□ -1.16
VCAN-210ENST00000513960 IGKV1OR2-108A0A075B7D4 117 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 TEX50A0A1B0GTY4 177 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 CD5LO43866 347 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 GCSHP23434 173 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 GLRXP35754 106 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 SSBP2P81877 361 aaPredicted RBP7.82□□□□□ -1.16
VCAN-210ENST00000513960 SMAGPQ0VAQ4 97 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 ADTRPQ96IZ2 230 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 RPP21Q9H633 154 aaKnown RBP7.82□□□□□ -1.16
VCAN-210ENST00000513960 SPCS1Q9Y6A9 102 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 OR10AG1Q8NH19 301 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 ITLN1Q8WWA0 313 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 GTSF1LQ9H1H1 148 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 AP5S1Q9NUS5 200 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 PRSS57Q6UWY2 283 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 OR1L4Q8NGR5 311 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 C1orf159Q96HA4 380 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 PKDREJQ9NTG1 2253 aa7.82□□□□□ -1.16
VCAN-210ENST00000513960 IGKV1-16P04430 117 aa7.81□□□□□ -1.16
VCAN-210ENST00000513960 CSN1S1P47710 185 aa7.81□□□□□ -1.16
VCAN-210ENST00000513960 SEM1Q6ZVN7 128 aa7.81□□□□□ -1.16
VCAN-210ENST00000513960 OR2K2Q8NGT1 345 aa7.81□□□□□ -1.16
VCAN-210ENST00000513960 SRSF12Q8WXF0 261 aaKnown RBP7.81□□□□□ -1.16
VCAN-210ENST00000513960 H1FXQ92522 213 aaKnown RBP7.81□□□□□ -1.16
VCAN-210ENST00000513960 KLK10O43240 276 aa7.81□□□□□ -1.16
VCAN-210ENST00000513960 CFHR2P36980 270 aa7.81□□□□□ -1.16
VCAN-210ENST00000513960 MSMPQ1L6U9 139 aa7.81□□□□□ -1.16
VCAN-210ENST00000513960 SAMD13Q5VXD3 122 aa7.81□□□□□ -1.16
VCAN-210ENST00000513960 ZNF474Q6S9Z5 364 aaPredicted RBP7.81□□□□□ -1.16
VCAN-210ENST00000513960 IGF2BP2-AS1Q96M15 143 aa7.81□□□□□ -1.16
VCAN-210ENST00000513960 LYZP61626 148 aa7.81□□□□□ -1.16
VCAN-210ENST00000513960 CT45A1Q5HYN5 189 aa7.81□□□□□ -1.16
VCAN-210ENST00000513960 CT45A3Q8NHU0 189 aa7.81□□□□□ -1.16
VCAN-210ENST00000513960 PERPQ96FX8 193 aa7.81□□□□□ -1.16
VCAN-210ENST00000513960 IGHV3-72A0A0B4J1Y9 119 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 CEACAM4O75871 244 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 TMEM108Q6UXF1 575 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 ZNF329Q86UD4 541 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 CIARTQ8N365 385 aaPredicted RBP7.8□□□□□ -1.16
VCAN-210ENST00000513960 CCL13Q99616 98 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 SLC25A2Q9BXI2 301 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 RNF7Q9UBF6 113 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 FAM90A9PA6NNJ1 464 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 SAA1P0DJI8 122 aaPredicted RBP7.8□□□□□ -1.16
VCAN-210ENST00000513960 TNFAIP6P98066 277 aaPredicted RBP7.8□□□□□ -1.16
VCAN-210ENST00000513960 GOLT1AQ6ZVE7 132 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 C18orf15Q96N68 181 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 DYSFO75923 2080 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 PLXNB1O43157 2135 aa7.8□□□□□ -1.16
VCAN-210ENST00000513960 TRGV8A0A0C4DH27 118 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms