RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 TOMM40O96008 361 aa13.19□□□□□ -0.3
HMGCS1-206ENST00000511774 PSG1P11464 419 aa13.19□□□□□ -0.3
HMGCS1-206ENST00000511774 S100GP29377 79 aa13.19□□□□□ -0.3
HMGCS1-206ENST00000511774 TSPAN5P62079 268 aa13.19□□□□□ -0.3
HMGCS1-206ENST00000511774 LYRM9A8MSI8 78 aa13.18□□□□□ -0.3
HMGCS1-206ENST00000511774 A8MTW9 85 aa13.18□□□□□ -0.3
HMGCS1-206ENST00000511774 RD3LP0DJH9 198 aa13.18□□□□□ -0.3
HMGCS1-206ENST00000511774 AZU1P20160 251 aa13.18□□□□□ -0.3
HMGCS1-206ENST00000511774 PSMB3P49720 205 aa13.18□□□□□ -0.3
HMGCS1-206ENST00000511774 TMEM69Q5SWH9 247 aa13.18□□□□□ -0.3
HMGCS1-206ENST00000511774 UHRF2Q96PU4 802 aa13.18□□□□□ -0.3
HMGCS1-206ENST00000511774 PDCD10Q9BUL8 212 aa13.18□□□□□ -0.3
HMGCS1-206ENST00000511774 Q9H3A6 140 aa13.18□□□□□ -0.3
HMGCS1-206ENST00000511774 ENY2Q9NPA8 101 aa13.18□□□□□ -0.3
HMGCS1-206ENST00000511774 BLOC1S6Q9UL45 172 aa13.18□□□□□ -0.3
HMGCS1-206ENST00000511774 LOC100506127A0A0U1RQW1 187 aa13.17□□□□□ -0.3
HMGCS1-206ENST00000511774 CRXO43186 299 aaPredicted RBP13.17□□□□□ -0.3
HMGCS1-206ENST00000511774 GSTZ1O43708 216 aaPredicted RBP13.17□□□□□ -0.3
HMGCS1-206ENST00000511774 PRSS3P35030 304 aa13.17□□□□□ -0.3
HMGCS1-206ENST00000511774 TGFBR1P36897 503 aa13.17□□□□□ -0.3
HMGCS1-206ENST00000511774 RND3P61587 244 aa13.17□□□□□ -0.3
HMGCS1-206ENST00000511774 SP6Q3SY56 376 aa13.17□□□□□ -0.3
HMGCS1-206ENST00000511774 C2orf83Q53S99 150 aa13.17□□□□□ -0.3
HMGCS1-206ENST00000511774 COQ8AQ8NI60 647 aa13.17□□□□□ -0.3
HMGCS1-206ENST00000511774 GPX8Q8TED1 209 aa13.17□□□□□ -0.3
HMGCS1-206ENST00000511774 S100A16Q96FQ6 103 aaKnown RBP13.17□□□□□ -0.3
HMGCS1-206ENST00000511774 IGF2BP2-AS1Q96M15 143 aa13.17□□□□□ -0.3
HMGCS1-206ENST00000511774 C17orf77Q96MU5 243 aa13.17□□□□□ -0.3
HMGCS1-206ENST00000511774 ANKRD65E5RJM6 399 aa13.16□□□□□ -0.3
HMGCS1-206ENST00000511774 M0QYG6 137 aa13.16□□□□□ -0.3
HMGCS1-206ENST00000511774 SLC25A4P12235 298 aa13.16□□□□□ -0.3
HMGCS1-206ENST00000511774 HTR2BP41595 481 aa13.16□□□□□ -0.3
HMGCS1-206ENST00000511774 AARDQ4LEZ3 155 aa13.16□□□□□ -0.3
HMGCS1-206ENST00000511774 UBE2NLQ5JXB2 153 aa13.16□□□□□ -0.3
HMGCS1-206ENST00000511774 Q6ZRN7 208 aaPredicted RBP13.16□□□□□ -0.3
HMGCS1-206ENST00000511774 RNF125Q96EQ8 232 aa13.16□□□□□ -0.3
HMGCS1-206ENST00000511774 ACY3Q96HD9 319 aa13.16□□□□□ -0.3
HMGCS1-206ENST00000511774 MDFICQ9P1T7 246 aa13.16□□□□□ -0.3
HMGCS1-206ENST00000511774 ID1P41134 155 aa13.15□□□□□ -0.3
HMGCS1-206ENST00000511774 PIGPP57054 158 aa13.15□□□□□ -0.3
HMGCS1-206ENST00000511774 GABARAPL2P60520 117 aa13.15□□□□□ -0.3
HMGCS1-206ENST00000511774 SPCS3P61009 180 aa13.15□□□□□ -0.3
HMGCS1-206ENST00000511774 SPATA31B1PQ5VZV4 182 aa13.15□□□□□ -0.3
HMGCS1-206ENST00000511774 TMEM208Q9BTX3 173 aa13.15□□□□□ -0.3
HMGCS1-206ENST00000511774 M0R2Z0 102 aa13.14□□□□□ -0.31
HMGCS1-206ENST00000511774 ATP5G1P05496 136 aa13.14□□□□□ -0.31
HMGCS1-206ENST00000511774 PGAM2P15259 253 aa13.14□□□□□ -0.31
HMGCS1-206ENST00000511774 ATP5G3P48201 142 aa13.14□□□□□ -0.31
HMGCS1-206ENST00000511774 CLINT1Q14677 625 aa13.14□□□□□ -0.31
HMGCS1-206ENST00000511774 EBLN2Q6P2I7 272 aa13.14□□□□□ -0.31
HMGCS1-206ENST00000511774 SAMD12Q8N8I0 201 aa13.14□□□□□ -0.31
HMGCS1-206ENST00000511774 RNASEH2CQ8TDP1 164 aaKnown RBP13.14□□□□□ -0.31
HMGCS1-206ENST00000511774 C18orf15Q96N68 181 aa13.14□□□□□ -0.31
HMGCS1-206ENST00000511774 PBDC1Q9BVG4 233 aa13.14□□□□□ -0.31
HMGCS1-206ENST00000511774 C3orf85A0A1B0GTC6 90 aa13.13□□□□□ -0.31
HMGCS1-206ENST00000511774 SPINK13Q1W4C9 94 aa13.13□□□□□ -0.31
HMGCS1-206ENST00000511774 TTC32Q5I0X7 151 aa13.13□□□□□ -0.31
HMGCS1-206ENST00000511774 BAP18Q8IXM2 172 aa13.13□□□□□ -0.31
HMGCS1-206ENST00000511774 HEYLQ9NQ87 328 aaPredicted RBP13.13□□□□□ -0.31
HMGCS1-206ENST00000511774 ZNF586Q9NXT0 402 aa13.13□□□□□ -0.31
HMGCS1-206ENST00000511774 DOK5Q9P104 306 aa13.13□□□□□ -0.31
HMGCS1-206ENST00000511774 IGKV1D-37A0A075B6S9 117 aa13.12□□□□□ -0.31
HMGCS1-206ENST00000511774 CBY3A6NI87 242 aa13.12□□□□□ -0.31
HMGCS1-206ENST00000511774 ISLRO14498 428 aa13.12□□□□□ -0.31
HMGCS1-206ENST00000511774 KRTAP10-1P60331 282 aa13.12□□□□□ -0.31
HMGCS1-206ENST00000511774 ZNF90Q03938 601 aa13.12□□□□□ -0.31
HMGCS1-206ENST00000511774 TRIM16LQ309B1 348 aa13.12□□□□□ -0.31
HMGCS1-206ENST00000511774 IZUMO2Q6UXV1 221 aa13.12□□□□□ -0.31
HMGCS1-206ENST00000511774 LHFPL1Q86WI0 220 aa13.12□□□□□ -0.31
HMGCS1-206ENST00000511774 SLC24A4Q8NFF2 622 aa13.12□□□□□ -0.31
HMGCS1-206ENST00000511774 OR11H7Q8NGC8 314 aa13.12□□□□□ -0.31
HMGCS1-206ENST00000511774 OR4C16Q8NGL9 310 aa13.12□□□□□ -0.31
HMGCS1-206ENST00000511774 LHFPL5Q8TAF8 219 aa13.12□□□□□ -0.31
HMGCS1-206ENST00000511774 SMR3BP02814 79 aaPredicted RBP13.11□□□□□ -0.31
HMGCS1-206ENST00000511774 UCP1P25874 307 aa13.11□□□□□ -0.31
HMGCS1-206ENST00000511774 TSPOP30536 169 aa13.11□□□□□ -0.31
HMGCS1-206ENST00000511774 LINC00315P59091 139 aa13.11□□□□□ -0.31
HMGCS1-206ENST00000511774 ESRGQ1W209 222 aa13.11□□□□□ -0.31
HMGCS1-206ENST00000511774 OR8G2PQ6IF36 304 aa13.11□□□□□ -0.31
HMGCS1-206ENST00000511774 OR52E5Q8NH55 327 aa13.11□□□□□ -0.31
HMGCS1-206ENST00000511774 FCGR1BQ92637 280 aa13.11□□□□□ -0.31
HMGCS1-206ENST00000511774 FRZBQ92765 325 aa13.11□□□□□ -0.31
HMGCS1-206ENST00000511774 ABHD1Q96SE0 405 aa13.11□□□□□ -0.31
HMGCS1-206ENST00000511774 HMCN2Q8NDA2 5059 aa13.11□□□□□ -0.31
HMGCS1-206ENST00000511774 RCVRNP35243 200 aa13.1□□□□□ -0.31
HMGCS1-206ENST00000511774 SUPT4H1P63272 117 aaKnown RBP13.1□□□□□ -0.31
HMGCS1-206ENST00000511774 RRNAD1Q96FB5 475 aaKnown RBP13.1□□□□□ -0.31
HMGCS1-206ENST00000511774 ZNF486Q96H40 463 aaPredicted RBP13.1□□□□□ -0.31
HMGCS1-206ENST00000511774 UPK3BQ9BT76 320 aa13.1□□□□□ -0.31
HMGCS1-206ENST00000511774 RPRMQ9NS64 109 aa13.1□□□□□ -0.31
HMGCS1-206ENST00000511774 TRAV12-2A0A075B6T6 113 aa13.09□□□□□ -0.31
HMGCS1-206ENST00000511774 INSP01308 110 aa13.09□□□□□ -0.31
HMGCS1-206ENST00000511774 CNN1P51911 297 aaKnown RBP13.09□□□□□ -0.31
HMGCS1-206ENST00000511774 SNX29P2Q8IUI4 249 aa13.09□□□□□ -0.31
HMGCS1-206ENST00000511774 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.09□□□□□ -0.31
HMGCS1-206ENST00000511774 CACNG5Q9UF02 275 aa13.09□□□□□ -0.31
HMGCS1-206ENST00000511774 A0A1W2PPQ1 181 aa13.08□□□□□ -0.32
HMGCS1-206ENST00000511774 ATG12O94817 140 aa13.08□□□□□ -0.32
HMGCS1-206ENST00000511774 RPS19P39019 145 aaKnown RBP13.08□□□□□ -0.32
HMGCS1-206ENST00000511774 MEF2DQ14814 521 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms