RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 SCGB2B2Q4G0G5 96 aa9.46□□□□□ -0.9
DDX41-210ENST00000509576 RNASEH2CQ8TDP1 164 aaKnown RBP9.46□□□□□ -0.9
DDX41-210ENST00000509576 RBPMSQ93062 196 aaKnown RBP9.46□□□□□ -0.9
DDX41-210ENST00000509576 SAV1Q9H4B6 383 aaPredicted RBP9.46□□□□□ -0.9
DDX41-210ENST00000509576 SEPSECSQ9HD40 501 aaKnown RBP9.46□□□□□ -0.9
DDX41-210ENST00000509576 ENY2Q9NPA8 101 aa9.46□□□□□ -0.9
DDX41-210ENST00000509576 IGHV3OR16-12A0A075B7B8 117 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 A0A087WXM4 84 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 RPS10-NUDT3A0A1W2PQS6 291 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 CRYM-AS1A6NIL9 109 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 FAM25AB3EWG3 89 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 FAM25CB3EWG5 89 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 FAM25GB3EWG6 89 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 RAB3DO95716 219 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 SPART-AS1P0CW21 52 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 RD3LP0DJH9 198 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 SMIM18P0DKX4 95 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 TBPP20226 339 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 NPY1RP25929 384 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 TMEM268Q5VZI3 342 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 STEAP1BQ6NZ63 245 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 FAM219AQ8IW50 185 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 CCDC71LQ8N9Z2 235 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 ZFAND1Q8TCF1 268 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 RNF125Q96EQ8 232 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 C1QTNF4Q9BXJ3 329 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 GPR132Q9UNW8 380 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 TMEM56-RWDD3S4R434 201 aa9.45□□□□□ -0.9
DDX41-210ENST00000509576 IGKV1OR2-108A0A075B7D4 117 aa9.44□□□□□ -0.9
DDX41-210ENST00000509576 CEBPZOSA8MTT3 80 aa9.44□□□□□ -0.9
DDX41-210ENST00000509576 AP2S1P53680 142 aaPredicted RBP9.44□□□□□ -0.9
DDX41-210ENST00000509576 SNRPD3P62318 126 aaKnown RBP9.44□□□□□ -0.9
DDX41-210ENST00000509576 SUPT4H1P63272 117 aaKnown RBP9.44□□□□□ -0.9
DDX41-210ENST00000509576 TMEM88Q6PEY1 159 aa9.44□□□□□ -0.9
DDX41-210ENST00000509576 AMTNQ6UX39 209 aa9.44□□□□□ -0.9
DDX41-210ENST00000509576 OR4C16Q8NGL9 310 aa9.44□□□□□ -0.9
DDX41-210ENST00000509576 RNASE11Q8TAA1 199 aaKnown RBP9.44□□□□□ -0.9
DDX41-210ENST00000509576 NARS2Q96I59 477 aaKnown RBP9.44□□□□□ -0.9
DDX41-210ENST00000509576 A8MTW9 85 aa9.43□□□□□ -0.9
DDX41-210ENST00000509576 CTDSP2O14595 271 aa9.43□□□□□ -0.9
DDX41-210ENST00000509576 ATG12O94817 140 aa9.43□□□□□ -0.9
DDX41-210ENST00000509576 GABARAPO95166 117 aa9.43□□□□□ -0.9
DDX41-210ENST00000509576 EIF2B2P49770 351 aaKnown RBP9.43□□□□□ -0.9
DDX41-210ENST00000509576 RORCP51449 518 aa9.43□□□□□ -0.9
DDX41-210ENST00000509576 TAS2R19P59542 299 aa9.43□□□□□ -0.9
DDX41-210ENST00000509576 TNP2Q05952 138 aa9.43□□□□□ -0.9
DDX41-210ENST00000509576 GAMTQ14353 236 aa9.43□□□□□ -0.9
DDX41-210ENST00000509576 GPR107Q5VW38 600 aa9.43□□□□□ -0.9
DDX41-210ENST00000509576 FOXI2Q6ZQN5 318 aa9.43□□□□□ -0.9
DDX41-210ENST00000509576 CLUHP3Q96NS8 147 aa9.43□□□□□ -0.9
DDX41-210ENST00000509576 NIPSNAP3BQ9BS92 247 aa9.43□□□□□ -0.9
DDX41-210ENST00000509576 RBKSQ9H477 322 aa9.43□□□□□ -0.9
DDX41-210ENST00000509576 YTHDF2Q9Y5A9 579 aaKnown RBP9.43□□□□□ -0.9
DDX41-210ENST00000509576 RFNGQ9Y644 331 aa9.43□□□□□ -0.9
DDX41-210ENST00000509576 A0A0J9YX75 114 aa9.42□□□□□ -0.9
DDX41-210ENST00000509576 IFNA10P01566 189 aa9.42□□□□□ -0.9
DDX41-210ENST00000509576 HTN3P15516 51 aa9.42□□□□□ -0.9
DDX41-210ENST00000509576 PAX9P55771 341 aa9.42□□□□□ -0.9
DDX41-210ENST00000509576 FAM78BQ5VT40 261 aa9.42□□□□□ -0.9
DDX41-210ENST00000509576 LYZL2Q7Z4W2 148 aa9.42□□□□□ -0.9
DDX41-210ENST00000509576 LINC00052Q96N35 136 aa9.42□□□□□ -0.9
DDX41-210ENST00000509576 PBDC1Q9BVG4 233 aa9.42□□□□□ -0.9
DDX41-210ENST00000509576 HSPB7Q9UBY9 170 aa9.42□□□□□ -0.9
DDX41-210ENST00000509576 PLAC8L1A1L4L8 177 aa9.41□□□□□ -0.9
DDX41-210ENST00000509576 SMIM9A6NGZ8 99 aa9.41□□□□□ -0.9
DDX41-210ENST00000509576 GABARAPH6UMI1 98 aa9.41□□□□□ -0.9
DDX41-210ENST00000509576 CRXO43186 299 aaPredicted RBP9.41□□□□□ -0.9
DDX41-210ENST00000509576 B3GALNT1O75752 331 aa9.41□□□□□ -0.9
DDX41-210ENST00000509576 TNFAIP8O95379 198 aa9.41□□□□□ -0.9
DDX41-210ENST00000509576 ZNF182P17025 639 aaPredicted RBP9.41□□□□□ -0.9
DDX41-210ENST00000509576 NUTF2P61970 127 aaKnown RBP9.41□□□□□ -0.9
DDX41-210ENST00000509576 TMEM182Q6ZP80 229 aaPredicted RBP9.41□□□□□ -0.9
DDX41-210ENST00000509576 OR4B1Q8NGF8 309 aa9.41□□□□□ -0.9
DDX41-210ENST00000509576 LOC102723971A0A1B0GUV8 181 aa9.4□□□□□ -0.9
DDX41-210ENST00000509576 SULT1A3P0DMM9 295 aa9.4□□□□□ -0.9
DDX41-210ENST00000509576 SULT1A4P0DMN0 295 aa9.4□□□□□ -0.9
DDX41-210ENST00000509576 PRB4P10163 310 aaPredicted RBP9.4□□□□□ -0.9
DDX41-210ENST00000509576 PSMB3P49720 205 aa9.4□□□□□ -0.9
DDX41-210ENST00000509576 OR2F1Q13607 317 aa9.4□□□□□ -0.9
DDX41-210ENST00000509576 OXA1LQ15070 435 aa9.4□□□□□ -0.9
DDX41-210ENST00000509576 RNF212Q495C1 297 aa9.4□□□□□ -0.9
DDX41-210ENST00000509576 IGFL4Q6B9Z1 124 aa9.4□□□□□ -0.9
DDX41-210ENST00000509576 UBE2DNLQ8IWF7 75 aa9.4□□□□□ -0.9
DDX41-210ENST00000509576 OR51S1Q8NGJ8 323 aa9.4□□□□□ -0.9
DDX41-210ENST00000509576 SMIM4Q8WVI0 70 aa9.4□□□□□ -0.9
DDX41-210ENST00000509576 FAM210BQ96KR6 192 aa9.4□□□□□ -0.9
DDX41-210ENST00000509576 SLC25A32Q9H2D1 315 aa9.4□□□□□ -0.9
DDX41-210ENST00000509576 C14orf166Q9Y224 244 aaKnown RBP9.4□□□□□ -0.9
DDX41-210ENST00000509576 TRAV8-2A0A0B4J237 113 aa9.39□□□□□ -0.91
DDX41-210ENST00000509576 TMEM189A5PLL7 270 aa9.39□□□□□ -0.91
DDX41-210ENST00000509576 PRSS46E5RG02 174 aa9.39□□□□□ -0.91
DDX41-210ENST00000509576 GSTZ1O43708 216 aaPredicted RBP9.39□□□□□ -0.91
DDX41-210ENST00000509576 SCGB2A1O75556 95 aa9.39□□□□□ -0.91
DDX41-210ENST00000509576 LYZP61626 148 aa9.39□□□□□ -0.91
DDX41-210ENST00000509576 PSG9Q00887 426 aa9.39□□□□□ -0.91
DDX41-210ENST00000509576 KLF9Q13886 244 aaPredicted RBP9.39□□□□□ -0.91
DDX41-210ENST00000509576 SPCS2Q15005 226 aa9.39□□□□□ -0.91
DDX41-210ENST00000509576 SURF2Q15527 256 aaPredicted RBP9.39□□□□□ -0.91
DDX41-210ENST00000509576 OR8G2PQ6IF36 304 aa9.39□□□□□ -0.91
DDX41-210ENST00000509576 MZT2AQ6P582 158 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms