RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 C8orf46Q8TAG6 207 aa7.4□□□□□ -1.23
PDGFRA-208ENST00000509490 MRPL36Q9P0J6 103 aaKnown RBP7.4□□□□□ -1.23
PDGFRA-208ENST00000509490 LAMTOR2Q9Y2Q5 125 aa7.4□□□□□ -1.23
PDGFRA-208ENST00000509490 HEATR1Q9H583 2144 aaKnown RBP7.4□□□□□ -1.23
PDGFRA-208ENST00000509490 C22orf34Q6ZV56 151 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 CLUHP3Q96NS8 147 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 OTORQ9NRC9 128 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 HIGD1CA8MV81 97 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 NDUFB3O43676 98 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 APOHP02749 345 aaPredicted RBP7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 TSPOP30536 169 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 CASP6P55212 293 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 UBE2G1P62253 170 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 LRRC10Q5BKY1 277 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 EBLN2Q6P2I7 272 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 VHLLQ6RSH7 139 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 RBMXL3Q8N7X1 1067 aaKnown RBP7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 DEFB108BQ8NET1 73 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 RND1Q92730 232 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 LINC00479Q96M42 142 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 SERTAD4Q9NUC0 356 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 ZNRD1Q9P1U0 126 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 PCNX2A6NKB5 2137 aa7.39□□□□□ -1.23
PDGFRA-208ENST00000509490 NDUFB8O95169 186 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 TCRAP04437 139 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 NBEAP1P0C6P0 100 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 CCL3L1P16619 93 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 RPRMLQ8N4K4 120 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 OR4F17Q8NGA8 305 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 C22orf15Q8WYQ4 148 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 FAM103A1Q9BTL3 118 aaKnown RBP7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 ST20Q9HBF5 79 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 A0A1B0GW15 77 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 IGLV1-47P01700 117 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 HNRNPA3P51991 378 aaKnown RBP7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 RBPMS2Q6ZRY4 209 aaKnown RBP7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 RNF24Q9Y225 148 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 C16orf97H3BN30 126 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 HSBP1O75506 76 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 MOSP00540 346 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 CA1P00915 261 aaPredicted RBP7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 THBDP07204 575 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 NPSP0C0P6 89 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 IGHV1-8P0DP01 117 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 G0S2P27469 103 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 RBPJQ06330 500 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 FAM27E3Q08E93 113 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 LYPD1Q8N2G4 141 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 MUC15Q8N387 334 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 CTSZQ9UBR2 303 aa7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 F11RQ9Y624 299 aaKnown RBP7.38□□□□□ -1.23
PDGFRA-208ENST00000509490 FAM186AA6NE01 2351 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 ZDBF2Q9HCK1 2354 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 IGHV1-69-2A0A0G2JMI3 117 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 SPINK4O60575 86 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 HLA-DRB1P01911 266 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 RPS20P60866 119 aaKnown RBP7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 SLC35B1P78383 322 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 COX8CQ7Z4L0 72 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 OR2D3Q8NGH3 330 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 GTSF1Q8WW33 167 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 SSBP3Q9BWW4 388 aaPredicted RBP7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 TMEM133Q9H2Q1 129 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 ZNF835Q9Y2P0 537 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 FREM2Q5SZK8 3169 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 TEX22C9J3V5 150 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 IGLV2-11P01706 119 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 SLC25A5P05141 298 aaKnown RBP7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 RPL27AP46776 148 aaKnown RBP7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 Q6ZN92 141 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 Q86TA4 180 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 STPG4Q8N801 248 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 DEFB124Q8NES8 71 aa7.37□□□□□ -1.23
PDGFRA-208ENST00000509490 PGPA6NDG6 321 aa7.36□□□□□ -1.23
PDGFRA-208ENST00000509490 A6NNC1 897 aa7.36□□□□□ -1.23
PDGFRA-208ENST00000509490 M0R2Z0 102 aa7.36□□□□□ -1.23
PDGFRA-208ENST00000509490 C10orf55Q5SWW7 151 aa7.36□□□□□ -1.23
PDGFRA-208ENST00000509490 SPATA12Q7Z6I5 190 aa7.36□□□□□ -1.23
PDGFRA-208ENST00000509490 TMEM75Q8N9X5 138 aa7.36□□□□□ -1.23
PDGFRA-208ENST00000509490 TMEM70Q9BUB7 260 aa7.36□□□□□ -1.23
PDGFRA-208ENST00000509490 SIGLEC9Q9Y336 463 aa7.36□□□□□ -1.23
PDGFRA-208ENST00000509490 TNCP24821 2201 aa7.36□□□□□ -1.23
PDGFRA-208ENST00000509490 LOC102724200A0A096LPH7 203 aaPredicted RBP7.36□□□□□ -1.23
PDGFRA-208ENST00000509490 IGLC1P0CG04 106 aa7.36□□□□□ -1.23
PDGFRA-208ENST00000509490 PET117Q6UWS5 81 aa7.36□□□□□ -1.23
PDGFRA-208ENST00000509490 FAM19A2Q8N3H0 131 aa7.36□□□□□ -1.23
PDGFRA-208ENST00000509490 ZNF48Q96MX3 618 aaPredicted RBP7.36□□□□□ -1.23
PDGFRA-208ENST00000509490 Q9H3A6 140 aa7.36□□□□□ -1.23
PDGFRA-208ENST00000509490 TRAV34A0A0B4J273 112 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 LY6LH3BQJ8 138 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 I3L2K1 104 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 SLC25A17O43808 307 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 DIAPH2-AS1Q14236 149 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 LINC00322Q6ZN03 302 aaPredicted RBP7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 DPF1Q92782 380 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 RNASE6Q93091 150 aaKnown RBP7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 TXN2Q99757 166 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 NPFFR1Q9GZQ6 430 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 A0A0G2JNJ9 132 aa7.35□□□□□ -1.23
PDGFRA-208ENST00000509490 SPAARA0A1B0GVQ0 90 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms