RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 TIMM9Q9Y5J7 89 aa12.45□□□□□ -0.42
NDFIP1-204ENST00000509436 CSMD3Q7Z407 3707 aa12.45□□□□□ -0.42
NDFIP1-204ENST00000509436 IGKV1OR2-108A0A075B7D4 117 aa12.44□□□□□ -0.42
NDFIP1-204ENST00000509436 F8W735 103 aaPredicted RBP12.44□□□□□ -0.42
NDFIP1-204ENST00000509436 C3orf84H3BNL1 204 aa12.44□□□□□ -0.42
NDFIP1-204ENST00000509436 AGPAT2O15120 278 aa12.44□□□□□ -0.42
NDFIP1-204ENST00000509436 CLEC3BP05452 202 aa12.44□□□□□ -0.42
NDFIP1-204ENST00000509436 ATP6V0CP27449 155 aa12.44□□□□□ -0.42
NDFIP1-204ENST00000509436 SELENOTP62341 195 aa12.44□□□□□ -0.42
NDFIP1-204ENST00000509436 CYP2G1PQ6ZSU1 146 aa12.44□□□□□ -0.42
NDFIP1-204ENST00000509436 PSMG3Q9BT73 122 aaPredicted RBP12.44□□□□□ -0.42
NDFIP1-204ENST00000509436 GNB4Q9HAV0 340 aa12.44□□□□□ -0.42
NDFIP1-204ENST00000509436 IGKV1D-37A0A075B6S9 117 aa12.43□□□□□ -0.42
NDFIP1-204ENST00000509436 TGOLN2O43493 480 aa12.43□□□□□ -0.42
NDFIP1-204ENST00000509436 LGALS1P09382 135 aaKnown RBP12.43□□□□□ -0.42
NDFIP1-204ENST00000509436 CD28P10747 220 aa12.43□□□□□ -0.42
NDFIP1-204ENST00000509436 ARL3P36405 182 aa12.43□□□□□ -0.42
NDFIP1-204ENST00000509436 CDX1P47902 265 aaPredicted RBP12.43□□□□□ -0.42
NDFIP1-204ENST00000509436 RUNX1Q01196 453 aa12.43□□□□□ -0.42
NDFIP1-204ENST00000509436 TIGITQ495A1 244 aa12.43□□□□□ -0.42
NDFIP1-204ENST00000509436 RSG1Q9BU20 258 aa12.43□□□□□ -0.42
NDFIP1-204ENST00000509436 GGTLC1Q9BX51 225 aa12.43□□□□□ -0.42
NDFIP1-204ENST00000509436 PEF1Q9UBV8 284 aaKnown RBP12.43□□□□□ -0.42
NDFIP1-204ENST00000509436 ANKRD34BA5PLL1 514 aa12.42□□□□□ -0.42
NDFIP1-204ENST00000509436 RPL29P47914 159 aaKnown RBP12.42□□□□□ -0.42
NDFIP1-204ENST00000509436 YPEL3P61236 119 aaPredicted RBP12.42□□□□□ -0.42
NDFIP1-204ENST00000509436 RELQ04864 619 aaPredicted RBP12.42□□□□□ -0.42
NDFIP1-204ENST00000509436 ZNF616Q08AN1 781 aa12.42□□□□□ -0.42
NDFIP1-204ENST00000509436 TCTEX1D4Q5JR98 221 aa12.42□□□□□ -0.42
NDFIP1-204ENST00000509436 BPIFCQ8NFQ6 507 aa12.42□□□□□ -0.42
NDFIP1-204ENST00000509436 PHYHIPLQ96FC7 376 aa12.42□□□□□ -0.42
NDFIP1-204ENST00000509436 OR5B12Q96R08 314 aa12.42□□□□□ -0.42
NDFIP1-204ENST00000509436 SLC25A32Q9H2D1 315 aa12.42□□□□□ -0.42
NDFIP1-204ENST00000509436 SLC45A2Q9UMX9 530 aa12.42□□□□□ -0.42
NDFIP1-204ENST00000509436 TSSC4Q9Y5U2 329 aaPredicted RBP12.42□□□□□ -0.42
NDFIP1-204ENST00000509436 NUDT19A8MXV4 375 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 TOMM40O96008 361 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 CFDP00746 253 aaPredicted RBP12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 IGKV1-17P01599 117 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 CTSGP08311 255 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 SEC11BP0C7V7 166 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 SPP1P10451 314 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 B2MP61769 119 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 SERF2P84101 59 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 ZNF90Q03938 601 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 MIC13Q5XKP0 118 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 STPG3Q8N7X2 389 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 C11orf44Q8N8P7 122 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 OR2G3Q8NGZ4 309 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 Q8WTZ3 238 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 C4orf3Q8WVX3 66 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 PXMP4Q9Y6I8 212 aa12.41□□□□□ -0.42
NDFIP1-204ENST00000509436 PPP5D1E7EU14 171 aa12.4□□□□□ -0.42
NDFIP1-204ENST00000509436 GGCTO75223 188 aaKnown RBP12.4□□□□□ -0.42
NDFIP1-204ENST00000509436 RD3LP0DJH9 198 aa12.4□□□□□ -0.42
NDFIP1-204ENST00000509436 ZNF600Q6ZNG1 722 aa12.4□□□□□ -0.42
NDFIP1-204ENST00000509436 Q6ZRG5 221 aa12.4□□□□□ -0.42
NDFIP1-204ENST00000509436 KLHL30-AS1Q8NEE0 82 aa12.4□□□□□ -0.42
NDFIP1-204ENST00000509436 CITED2Q99967 270 aaPredicted RBP12.4□□□□□ -0.42
NDFIP1-204ENST00000509436 B9D2Q9BPU9 175 aa12.4□□□□□ -0.42
NDFIP1-204ENST00000509436 CHRDL1Q9BU40 450 aa12.4□□□□□ -0.42
NDFIP1-204ENST00000509436 SH3BGRL3Q9H299 93 aa12.4□□□□□ -0.42
NDFIP1-204ENST00000509436 SLC39A9Q9NUM3 307 aa12.4□□□□□ -0.42
NDFIP1-204ENST00000509436 RYR1P21817 5038 aa12.39□□□□□ -0.43
NDFIP1-204ENST00000509436 MBP02144 154 aa12.39□□□□□ -0.43
NDFIP1-204ENST00000509436 HSPB1P04792 205 aaKnown RBP12.39□□□□□ -0.43
NDFIP1-204ENST00000509436 LINC00869P0C866 280 aa12.39□□□□□ -0.43
NDFIP1-204ENST00000509436 PSG1P11464 419 aa12.39□□□□□ -0.43
NDFIP1-204ENST00000509436 ADMP35318 185 aa12.39□□□□□ -0.43
NDFIP1-204ENST00000509436 PRR20EP86478 221 aa12.39□□□□□ -0.43
NDFIP1-204ENST00000509436 PRR20CP86479 221 aa12.39□□□□□ -0.43
NDFIP1-204ENST00000509436 PRR20DP86480 221 aa12.39□□□□□ -0.43
NDFIP1-204ENST00000509436 PRR20BP86481 221 aa12.39□□□□□ -0.43
NDFIP1-204ENST00000509436 PRR20AP86496 221 aa12.39□□□□□ -0.43
NDFIP1-204ENST00000509436 FFAR4Q5NUL3 377 aa12.39□□□□□ -0.43
NDFIP1-204ENST00000509436 AKR1C8PQ5T2L2 129 aa12.39□□□□□ -0.43
NDFIP1-204ENST00000509436 OR51G1Q8NGK1 321 aa12.39□□□□□ -0.43
NDFIP1-204ENST00000509436 TMED6Q8WW62 240 aa12.39□□□□□ -0.43
NDFIP1-204ENST00000509436 I3L521 148 aa12.38□□□□□ -0.43
NDFIP1-204ENST00000509436 IFNA7P01567 189 aa12.38□□□□□ -0.43
NDFIP1-204ENST00000509436 TRBV12-3P01733 135 aa12.38□□□□□ -0.43
NDFIP1-204ENST00000509436 GATA2P23769 480 aaPredicted RBP12.38□□□□□ -0.43
NDFIP1-204ENST00000509436 ELLP55199 621 aaPredicted RBP12.38□□□□□ -0.43
NDFIP1-204ENST00000509436 ACOT6Q3I5F7 207 aaPredicted RBP12.38□□□□□ -0.43
NDFIP1-204ENST00000509436 PXDC1Q5TGL8 231 aa12.38□□□□□ -0.43
NDFIP1-204ENST00000509436 TEX261Q6UWH6 196 aa12.38□□□□□ -0.43
NDFIP1-204ENST00000509436 TMEM182Q6ZP80 229 aaPredicted RBP12.38□□□□□ -0.43
NDFIP1-204ENST00000509436 UMAD1C9J7I0 102 aa12.37□□□□□ -0.43
NDFIP1-204ENST00000509436 BMPR1BO00238 502 aa12.37□□□□□ -0.43
NDFIP1-204ENST00000509436 ZP3P21754 424 aa12.37□□□□□ -0.43
NDFIP1-204ENST00000509436 LYZP61626 148 aa12.37□□□□□ -0.43
NDFIP1-204ENST00000509436 RPEL1Q2QD12 228 aa12.37□□□□□ -0.43
NDFIP1-204ENST00000509436 ALKAL2Q6UX46 152 aa12.37□□□□□ -0.43
NDFIP1-204ENST00000509436 NDUFA11Q86Y39 141 aa12.37□□□□□ -0.43
NDFIP1-204ENST00000509436 OR1L4Q8NGR5 311 aa12.37□□□□□ -0.43
NDFIP1-204ENST00000509436 DPF1Q92782 380 aa12.37□□□□□ -0.43
NDFIP1-204ENST00000509436 PFDN5Q99471 154 aa12.37□□□□□ -0.43
NDFIP1-204ENST00000509436 PUS1Q9Y606 427 aaKnown RBP eCLIP12.37□□□□□ -0.43
NDFIP1-204ENST00000509436 RFNGQ9Y644 331 aa12.37□□□□□ -0.43
NDFIP1-204ENST00000509436 LCE6AA0A183 80 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms