RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 DYNC2LI1Q8TCX1 351 aa11.17□□□□□ -0.62
TPM3-219ENST00000509409 DTD1Q8TEA8 209 aa11.17□□□□□ -0.62
TPM3-219ENST00000509409 PBDC1Q9BVG4 233 aa11.17□□□□□ -0.62
TPM3-219ENST00000509409 HRH4Q9H3N8 390 aa11.17□□□□□ -0.62
TPM3-219ENST00000509409 RBKSQ9H477 322 aa11.17□□□□□ -0.62
TPM3-219ENST00000509409 A0A0B4J2A0 478 aa11.16□□□□□ -0.62
TPM3-219ENST00000509409 FABP12A6NFH5 140 aa11.16□□□□□ -0.62
TPM3-219ENST00000509409 FAM90A26D6RGX4 464 aa11.16□□□□□ -0.62
TPM3-219ENST00000509409 PSG1P11464 419 aa11.16□□□□□ -0.62
TPM3-219ENST00000509409 TMBIM6P55061 237 aa11.16□□□□□ -0.62
TPM3-219ENST00000509409 OR1S1Q8NH92 325 aa11.16□□□□□ -0.62
TPM3-219ENST00000509409 NRN1Q9NPD7 142 aa11.16□□□□□ -0.62
TPM3-219ENST00000509409 SHPKQ9UHJ6 478 aa11.16□□□□□ -0.62
TPM3-219ENST00000509409 PFDN2Q9UHV9 154 aa11.16□□□□□ -0.62
TPM3-219ENST00000509409 FRAS1Q86XX4 4008 aa11.15□□□□□ -0.62
TPM3-219ENST00000509409 ELOA3CA0A087WX78 387 aaPredicted RBP11.15□□□□□ -0.62
TPM3-219ENST00000509409 ZFP92A6NM28 416 aa11.15□□□□□ -0.62
TPM3-219ENST00000509409 ZNF705EA8MWA4 302 aaPredicted RBP11.15□□□□□ -0.62
TPM3-219ENST00000509409 BUB3O43684 328 aa11.15□□□□□ -0.62
TPM3-219ENST00000509409 SLC35E1Q96K37 410 aa11.15□□□□□ -0.62
TPM3-219ENST00000509409 HSPB7Q9UBY9 170 aa11.15□□□□□ -0.62
TPM3-219ENST00000509409 APLNQ9ULZ1 77 aa11.15□□□□□ -0.62
TPM3-219ENST00000509409 X6R8D5 127 aa11.15□□□□□ -0.62
TPM3-219ENST00000509409 DNAH10Q8IVF4 4471 aa11.14□□□□□ -0.63
TPM3-219ENST00000509409 TRAV10A0A0B4J240 114 aa11.14□□□□□ -0.63
TPM3-219ENST00000509409 TNFSF8P32971 234 aa11.14□□□□□ -0.63
TPM3-219ENST00000509409 SRPXP78539 464 aa11.14□□□□□ -0.63
TPM3-219ENST00000509409 Q6ZTC4 211 aa11.14□□□□□ -0.63
TPM3-219ENST00000509409 RNF125Q96EQ8 232 aa11.14□□□□□ -0.63
TPM3-219ENST00000509409 BCL7BQ9BQE9 202 aa11.14□□□□□ -0.63
TPM3-219ENST00000509409 C1QTNF4Q9BXJ3 329 aa11.14□□□□□ -0.63
TPM3-219ENST00000509409 SEPSECSQ9HD40 501 aaKnown RBP11.14□□□□□ -0.63
TPM3-219ENST00000509409 XCL2Q9UBD3 114 aa11.14□□□□□ -0.63
TPM3-219ENST00000509409 PAIP2BQ9ULR5 123 aaKnown RBP11.14□□□□□ -0.63
TPM3-219ENST00000509409 AGRNO00468 2067 aa11.13□□□□□ -0.63
TPM3-219ENST00000509409 H3BMM0 161 aa11.13□□□□□ -0.63
TPM3-219ENST00000509409 FAUP35544 74 aaKnown RBP11.13□□□□□ -0.63
TPM3-219ENST00000509409 GPX4P36969 197 aaPredicted RBP11.13□□□□□ -0.63
TPM3-219ENST00000509409 NUP62P37198 522 aaPredicted RBP11.13□□□□□ -0.63
TPM3-219ENST00000509409 ATP5IP56385 69 aaPredicted RBP11.13□□□□□ -0.63
TPM3-219ENST00000509409 SUPT4H1P63272 117 aaKnown RBP11.13□□□□□ -0.63
TPM3-219ENST00000509409 PRR20EP86478 221 aa11.13□□□□□ -0.63
TPM3-219ENST00000509409 PRR20CP86479 221 aa11.13□□□□□ -0.63
TPM3-219ENST00000509409 PRR20DP86480 221 aa11.13□□□□□ -0.63
TPM3-219ENST00000509409 PRR20BP86481 221 aa11.13□□□□□ -0.63
TPM3-219ENST00000509409 PRR20AP86496 221 aa11.13□□□□□ -0.63
TPM3-219ENST00000509409 TMED4Q7Z7H5 227 aa11.13□□□□□ -0.63
TPM3-219ENST00000509409 CSNK1G2-AS1Q8NCQ2 148 aa11.13□□□□□ -0.63
TPM3-219ENST00000509409 PPP1R14BQ96C90 147 aa11.13□□□□□ -0.63
TPM3-219ENST00000509409 LINC00052Q96N35 136 aa11.13□□□□□ -0.63
TPM3-219ENST00000509409 PIGBOS1A0A0B4J2F0 54 aa11.12□□□□□ -0.63
TPM3-219ENST00000509409 IGKV3-20P01619 116 aa11.12□□□□□ -0.63
TPM3-219ENST00000509409 FABP1P07148 127 aa11.12□□□□□ -0.63
TPM3-219ENST00000509409 ID1P41134 155 aa11.12□□□□□ -0.63
TPM3-219ENST00000509409 LYZP61626 148 aa11.12□□□□□ -0.63
TPM3-219ENST00000509409 RAB11AP62491 216 aa11.12□□□□□ -0.63
TPM3-219ENST00000509409 ZNF90Q03938 601 aa11.12□□□□□ -0.63
TPM3-219ENST00000509409 GAMTQ14353 236 aa11.12□□□□□ -0.63
TPM3-219ENST00000509409 PYDC2Q56P42 97 aa11.12□□□□□ -0.63
TPM3-219ENST00000509409 MCFD2Q8NI22 146 aa11.12□□□□□ -0.63
TPM3-219ENST00000509409 VPS13DQ5THJ4 4388 aa11.12□□□□□ -0.63
TPM3-219ENST00000509409 IGHV4-4A0A075B6R2 117 aa11.11□□□□□ -0.63
TPM3-219ENST00000509409 SNRPGP15A8MWD9 76 aa11.11□□□□□ -0.63
TPM3-219ENST00000509409 IAPPP10997 89 aa11.11□□□□□ -0.63
TPM3-219ENST00000509409 NKX2-1P43699 371 aaPredicted RBP11.11□□□□□ -0.63
TPM3-219ENST00000509409 AP3S2P59780 193 aa11.11□□□□□ -0.63
TPM3-219ENST00000509409 OR2F1Q13607 317 aa11.11□□□□□ -0.63
TPM3-219ENST00000509409 OR8G2PQ6IF36 304 aa11.11□□□□□ -0.63
TPM3-219ENST00000509409 ZNF767PQ75MW2 155 aa11.11□□□□□ -0.63
TPM3-219ENST00000509409 SOSTQ9BQB4 213 aa11.11□□□□□ -0.63
TPM3-219ENST00000509409 SLIRPQ9GZT3 109 aaKnown RBP11.11□□□□□ -0.63
TPM3-219ENST00000509409 DEFB131BA0A096LNP1 70 aa11.1□□□□□ -0.63
TPM3-219ENST00000509409 HLA-DRB4P13762 266 aa11.1□□□□□ -0.63
TPM3-219ENST00000509409 VAMP1P23763 118 aa11.1□□□□□ -0.63
TPM3-219ENST00000509409 FXYD7P58549 80 aa11.1□□□□□ -0.63
TPM3-219ENST00000509409 TOMM5Q8N4H5 51 aa11.1□□□□□ -0.63
TPM3-219ENST00000509409 CELA1Q9UNI1 258 aa11.1□□□□□ -0.63
TPM3-219ENST00000509409 HLA-DRB4X5D2U9 266 aa11.1□□□□□ -0.63
TPM3-219ENST00000509409 IGKV1D-37A0A075B6S9 117 aa11.09□□□□□ -0.63
TPM3-219ENST00000509409 IGHV3OR16-12A0A075B7B8 117 aa11.09□□□□□ -0.63
TPM3-219ENST00000509409 DUXBA0A1W2PPF3 345 aa11.09□□□□□ -0.63
TPM3-219ENST00000509409 H3BMQ9 156 aa11.09□□□□□ -0.63
TPM3-219ENST00000509409 RPP30P78346 268 aaKnown RBP11.09□□□□□ -0.63
TPM3-219ENST00000509409 C12orf74Q32Q52 190 aa11.09□□□□□ -0.63
TPM3-219ENST00000509409 TMEM128Q5BJH2 165 aa11.09□□□□□ -0.63
TPM3-219ENST00000509409 OR4B1Q8NGF8 309 aa11.09□□□□□ -0.63
TPM3-219ENST00000509409 COQ8AQ8NI60 647 aa11.09□□□□□ -0.63
TPM3-219ENST00000509409 MED6O75586 246 aa11.08□□□□□ -0.64
TPM3-219ENST00000509409 EMP1P54849 157 aa11.08□□□□□ -0.64
TPM3-219ENST00000509409 DEFB1P60022 68 aa11.08□□□□□ -0.64
TPM3-219ENST00000509409 C1orf194Q5T5A4 169 aa11.08□□□□□ -0.64
TPM3-219ENST00000509409 GDF5OSQ5U4N7 250 aa11.08□□□□□ -0.64
TPM3-219ENST00000509409 OR8I2Q8N0Y5 310 aa11.08□□□□□ -0.64
TPM3-219ENST00000509409 TRGV9Q99603 122 aa11.08□□□□□ -0.64
TPM3-219ENST00000509409 RNF126Q9BV68 326 aa11.08□□□□□ -0.64
TPM3-219ENST00000509409 WDR12Q9GZL7 423 aaKnown RBP11.08□□□□□ -0.64
TPM3-219ENST00000509409 DNAH6Q9C0G6 4158 aa11.08□□□□□ -0.64
TPM3-219ENST00000509409 PITX3O75364 302 aa11.07□□□□□ -0.64
TPM3-219ENST00000509409 PSMB3P49720 205 aa11.07□□□□□ -0.64
TPM3-219ENST00000509409 EBLN2Q6P2I7 272 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms