RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 C19orf35Q6ZS72 473 aa11.12□□□□□ -0.63
HMGCL-208ENST00000509389 TMEM144Q7Z5S9 345 aa11.12□□□□□ -0.63
HMGCL-208ENST00000509389 THAP8Q8NA92 274 aa11.12□□□□□ -0.63
HMGCL-208ENST00000509389 HSD17B11Q8NBQ5 300 aa11.12□□□□□ -0.63
HMGCL-208ENST00000509389 NPCDR1Q9BY65 106 aa11.12□□□□□ -0.63
HMGCL-208ENST00000509389 SLC25A32Q9H2D1 315 aa11.12□□□□□ -0.63
HMGCL-208ENST00000509389 NPVFQ9HCQ7 196 aa11.12□□□□□ -0.63
HMGCL-208ENST00000509389 PAIP2BQ9ULR5 123 aaKnown RBP11.12□□□□□ -0.63
HMGCL-208ENST00000509389 RYR2Q92736 4967 aa11.11□□□□□ -0.63
HMGCL-208ENST00000509389 IGKV1OR2-108A0A075B7D4 117 aa11.11□□□□□ -0.63
HMGCL-208ENST00000509389 A0A0G2JLM5 398 aa11.11□□□□□ -0.63
HMGCL-208ENST00000509389 ANKRD34BA5PLL1 514 aa11.11□□□□□ -0.63
HMGCL-208ENST00000509389 K7EIM0 57 aa11.11□□□□□ -0.63
HMGCL-208ENST00000509389 IGHV4-30-4P0DP06 118 aa11.11□□□□□ -0.63
HMGCL-208ENST00000509389 ZP3P21754 424 aa11.11□□□□□ -0.63
HMGCL-208ENST00000509389 KLF5Q13887 457 aaPredicted RBP11.11□□□□□ -0.63
HMGCL-208ENST00000509389 GAMTQ14353 236 aa11.11□□□□□ -0.63
HMGCL-208ENST00000509389 LRRC20Q8TCA0 184 aa11.11□□□□□ -0.63
HMGCL-208ENST00000509389 TM2D3Q9BRN9 247 aa11.11□□□□□ -0.63
HMGCL-208ENST00000509389 TRBV9A0A0B4J1U6 114 aa11.1□□□□□ -0.63
HMGCL-208ENST00000509389 UMAD1C9J7I0 102 aa11.1□□□□□ -0.63
HMGCL-208ENST00000509389 APELAP0DMC3 54 aa11.1□□□□□ -0.63
HMGCL-208ENST00000509389 SERF2P84101 59 aa11.1□□□□□ -0.63
HMGCL-208ENST00000509389 FAM74A1Q5RGS3 127 aa11.1□□□□□ -0.63
HMGCL-208ENST00000509389 BTNL8Q6UX41 500 aa11.1□□□□□ -0.63
HMGCL-208ENST00000509389 TMEM116Q8NCL8 245 aa11.1□□□□□ -0.63
HMGCL-208ENST00000509389 CITED4Q96RK1 184 aa11.1□□□□□ -0.63
HMGCL-208ENST00000509389 MGST2Q99735 147 aa11.1□□□□□ -0.63
HMGCL-208ENST00000509389 RSG1Q9BU20 258 aa11.1□□□□□ -0.63
HMGCL-208ENST00000509389 GGTLC1Q9BX51 225 aa11.1□□□□□ -0.63
HMGCL-208ENST00000509389 C19orf73Q9NVV2 129 aa11.1□□□□□ -0.63
HMGCL-208ENST00000509389 MRPL36Q9P0J6 103 aaKnown RBP11.1□□□□□ -0.63
HMGCL-208ENST00000509389 A8MZ25 164 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 FGF7P21781 194 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 OPRK1P41145 380 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 RAB5CP51148 216 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 PRR20EP86478 221 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 PRR20CP86479 221 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 PRR20DP86480 221 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 PRR20BP86481 221 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 PRR20AP86496 221 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 DEFA5Q01523 94 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 ETFRF1Q6IPR1 90 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 TEPPQ6URK8 271 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 IL34Q6ZMJ4 242 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 OR9G4Q8NGQ1 327 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 SCGB1C1Q8TD33 95 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 RNF141Q8WVD5 230 aa11.09□□□□□ -0.63
HMGCL-208ENST00000509389 SAT2Q96F10 170 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-208ENST00000509389 SACSQ9NZJ4 4579 aa11.08□□□□□ -0.64
HMGCL-208ENST00000509389 IGKV1D-37A0A075B6S9 117 aa11.08□□□□□ -0.64
HMGCL-208ENST00000509389 MT-CO2P00403 227 aa11.08□□□□□ -0.64
HMGCL-208ENST00000509389 HIST1H1BP16401 226 aaKnown RBP11.08□□□□□ -0.64
HMGCL-208ENST00000509389 FCGR2BP31994 310 aaPredicted RBP11.08□□□□□ -0.64
HMGCL-208ENST00000509389 SYNJ2BPP57105 145 aa11.08□□□□□ -0.64
HMGCL-208ENST00000509389 ZNF343Q6P1L6 599 aa11.08□□□□□ -0.64
HMGCL-208ENST00000509389 LYPD6BQ8NI32 183 aa11.08□□□□□ -0.64
HMGCL-208ENST00000509389 SLC35E1Q96K37 410 aa11.08□□□□□ -0.64
HMGCL-208ENST00000509389 KCNIP2Q9NS61 270 aa11.08□□□□□ -0.64
HMGCL-208ENST00000509389 MED9Q9NWA0 146 aa11.08□□□□□ -0.64
HMGCL-208ENST00000509389 PEF1Q9UBV8 284 aaKnown RBP11.08□□□□□ -0.64
HMGCL-208ENST00000509389 RFNGQ9Y644 331 aa11.08□□□□□ -0.64
HMGCL-208ENST00000509389 F8W735 103 aaPredicted RBP11.07□□□□□ -0.64
HMGCL-208ENST00000509389 TRBV12-3P01733 135 aa11.07□□□□□ -0.64
HMGCL-208ENST00000509389 AKR1C1Q04828 323 aa11.07□□□□□ -0.64
HMGCL-208ENST00000509389 MLANAQ16655 118 aa11.07□□□□□ -0.64
HMGCL-208ENST00000509389 SLC25A24Q6NUK1 477 aa11.07□□□□□ -0.64
HMGCL-208ENST00000509389 DPPA3Q6W0C5 159 aa11.07□□□□□ -0.64
HMGCL-208ENST00000509389 OR4X1Q8NH49 305 aa11.07□□□□□ -0.64
HMGCL-208ENST00000509389 LINC00862A6NCI5 91 aa11.06□□□□□ -0.64
HMGCL-208ENST00000509389 AGPAT2O15120 278 aa11.06□□□□□ -0.64
HMGCL-208ENST00000509389 CYB5BO43169 146 aa11.06□□□□□ -0.64
HMGCL-208ENST00000509389 RPL29P47914 159 aaKnown RBP11.06□□□□□ -0.64
HMGCL-208ENST00000509389 MISP3Q96FF7 219 aa11.06□□□□□ -0.64
HMGCL-208ENST00000509389 USMG5Q96IX5 58 aa11.06□□□□□ -0.64
HMGCL-208ENST00000509389 ATP6V0BQ99437 205 aa11.06□□□□□ -0.64
HMGCL-208ENST00000509389 EDA2RQ9HAV5 297 aa11.06□□□□□ -0.64
HMGCL-208ENST00000509389 GAR1Q9NY12 217 aaKnown RBP11.06□□□□□ -0.64
HMGCL-208ENST00000509389 SLC45A2Q9UMX9 530 aa11.06□□□□□ -0.64
HMGCL-208ENST00000509389 C17orf112F2Z3M2 114 aa11.05□□□□□ -0.64
HMGCL-208ENST00000509389 CSN3P07498 182 aa11.05□□□□□ -0.64
HMGCL-208ENST00000509389 CAMLGP49069 296 aa11.05□□□□□ -0.64
HMGCL-208ENST00000509389 RND2P52198 227 aa11.05□□□□□ -0.64
HMGCL-208ENST00000509389 ZFAND6Q6FIF0 208 aa11.05□□□□□ -0.64
HMGCL-208ENST00000509389 TMEM182Q6ZP80 229 aaPredicted RBP11.05□□□□□ -0.64
HMGCL-208ENST00000509389 VN1R17PQ8TDU5 208 aa11.05□□□□□ -0.64
HMGCL-208ENST00000509389 TRGV9Q99603 122 aa11.05□□□□□ -0.64
HMGCL-208ENST00000509389 SMCO3A2RU48 225 aa11.04□□□□□ -0.64
HMGCL-208ENST00000509389 YIF1AO95070 293 aa11.04□□□□□ -0.64
HMGCL-208ENST00000509389 PRH1P02810 166 aa11.04□□□□□ -0.64
HMGCL-208ENST00000509389 LINC00869P0C866 280 aa11.04□□□□□ -0.64
HMGCL-208ENST00000509389 IGLC1P0CG04 106 aa11.04□□□□□ -0.64
HMGCL-208ENST00000509389 DEFA4P12838 97 aa11.04□□□□□ -0.64
HMGCL-208ENST00000509389 NDUFA5Q16718 116 aa11.04□□□□□ -0.64
HMGCL-208ENST00000509389 RPEL1Q2QD12 228 aa11.04□□□□□ -0.64
HMGCL-208ENST00000509389 TMEM41BQ5BJD5 291 aa11.04□□□□□ -0.64
HMGCL-208ENST00000509389 NPIPB3Q92617 1050 aa11.04□□□□□ -0.64
HMGCL-208ENST00000509389 RPRMQ9NS64 109 aa11.04□□□□□ -0.64
HMGCL-208ENST00000509389 SIGLEC8Q9NYZ4 499 aa11.04□□□□□ -0.64
HMGCL-208ENST00000509389 THYN1Q9P016 225 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms