RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 PFDN5Q99471 154 aa8.04□□□□□ -1.12
RFC1-211ENST00000509084 C19orf24Q9BVV8 132 aa8.04□□□□□ -1.12
RFC1-211ENST00000509084 SH3BGRL3Q9H299 93 aa8.04□□□□□ -1.12
RFC1-211ENST00000509084 SLC39A9Q9NUM3 307 aa8.04□□□□□ -1.12
RFC1-211ENST00000509084 PEF1Q9UBV8 284 aaKnown RBP8.04□□□□□ -1.12
RFC1-211ENST00000509084 UBQLN2Q9UHD9 624 aa8.04□□□□□ -1.12
RFC1-211ENST00000509084 OR2C1O95371 312 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 IGHV3-11P01762 117 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 CTSGP08311 255 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 RD3LP0DJH9 198 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 M6PRP20645 277 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 SULT1A2P50226 295 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 PLP1P60201 277 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 TIGITQ495A1 244 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 TMEM41BQ5BJD5 291 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 MIC13Q5XKP0 118 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 TMEM182Q6ZP80 229 aaPredicted RBP8.03□□□□□ -1.12
RFC1-211ENST00000509084 LCNL1Q6ZST4 164 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 OR1L4Q8NGR5 311 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 RNF141Q8WVD5 230 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 RNF2Q99496 336 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 GNB4Q9HAV0 340 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 RNF24Q9Y225 148 aa8.03□□□□□ -1.12
RFC1-211ENST00000509084 TSSC4Q9Y5U2 329 aaPredicted RBP8.03□□□□□ -1.12
RFC1-211ENST00000509084 ELOA3CA0A087WX78 387 aaPredicted RBP8.02□□□□□ -1.13
RFC1-211ENST00000509084 BMPR1BO00238 502 aa8.02□□□□□ -1.13
RFC1-211ENST00000509084 NDUFA4O00483 81 aa8.02□□□□□ -1.13
RFC1-211ENST00000509084 RGS13O14921 159 aa8.02□□□□□ -1.13
RFC1-211ENST00000509084 COX7A2P2O60397 106 aa8.02□□□□□ -1.13
RFC1-211ENST00000509084 GGCTO75223 188 aaKnown RBP8.02□□□□□ -1.13
RFC1-211ENST00000509084 PSG1P11464 419 aa8.02□□□□□ -1.13
RFC1-211ENST00000509084 ELLP55199 621 aaPredicted RBP8.02□□□□□ -1.13
RFC1-211ENST00000509084 SRSF2Q01130 221 aaKnown RBP8.02□□□□□ -1.13
RFC1-211ENST00000509084 ZNF90Q03938 601 aa8.02□□□□□ -1.13
RFC1-211ENST00000509084 GATAD1Q8WUU5 269 aa8.02□□□□□ -1.13
RFC1-211ENST00000509084 MRPL32Q9BYC8 188 aaKnown RBP8.02□□□□□ -1.13
RFC1-211ENST00000509084 MTORP42345 2549 aa8.02□□□□□ -1.13
RFC1-211ENST00000509084 A0A1W2PPV4 95 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 NUDT19A8MXV4 375 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 I3L521 148 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 HSPB1P04792 205 aaKnown RBP8.01□□□□□ -1.13
RFC1-211ENST00000509084 IL4P05112 153 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 ZP3P21754 424 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 ADMP35318 185 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 LYZP61626 148 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 IFITM2Q01629 132 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 TCTEX1D4Q5JR98 221 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 KLHL30-AS1Q8NEE0 82 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 OR10G4Q8NGN3 311 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 OR10G9Q8NGN4 311 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 OR10G7Q8NGN6 311 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 RNF125Q96EQ8 232 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 CHRDL1Q9BU40 450 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 PFDN2Q9UHV9 154 aa8.01□□□□□ -1.13
RFC1-211ENST00000509084 WI2-2373I1.2A0A1W2PRP0 233 aa8□□□□□ -1.13
RFC1-211ENST00000509084 ANKRD34BA5PLL1 514 aa8□□□□□ -1.13
RFC1-211ENST00000509084 PPP5D1E7EU14 171 aa8□□□□□ -1.13
RFC1-211ENST00000509084 TEX46H3BTG2 121 aa8□□□□□ -1.13
RFC1-211ENST00000509084 HYPMO75409 117 aa8□□□□□ -1.13
RFC1-211ENST00000509084 CD28P10747 220 aa8□□□□□ -1.13
RFC1-211ENST00000509084 GATA2P23769 480 aaPredicted RBP8□□□□□ -1.13
RFC1-211ENST00000509084 RAB14P61106 215 aa8□□□□□ -1.13
RFC1-211ENST00000509084 RHOBP62745 196 aa8□□□□□ -1.13
RFC1-211ENST00000509084 BLOC1S1P78537 153 aa8□□□□□ -1.13
RFC1-211ENST00000509084 RPEL1Q2QD12 228 aa8□□□□□ -1.13
RFC1-211ENST00000509084 FAM106AQ4KMX7 169 aa8□□□□□ -1.13
RFC1-211ENST00000509084 AWAT1Q58HT5 328 aa8□□□□□ -1.13
RFC1-211ENST00000509084 C10orf113Q5VZT2 155 aa8□□□□□ -1.13
RFC1-211ENST00000509084 NDUFA11Q86Y39 141 aa8□□□□□ -1.13
RFC1-211ENST00000509084 GPHB5Q86YW7 130 aa8□□□□□ -1.13
RFC1-211ENST00000509084 DPF1Q92782 380 aa8□□□□□ -1.13
RFC1-211ENST00000509084 SAT2Q96F10 170 aaPredicted RBP8□□□□□ -1.13
RFC1-211ENST00000509084 OR5B12Q96R08 314 aa8□□□□□ -1.13
RFC1-211ENST00000509084 ACTR3CQ9C0K3 210 aaPredicted RBP8□□□□□ -1.13
RFC1-211ENST00000509084 DNAJC4Q9NNZ3 241 aa8□□□□□ -1.13
RFC1-211ENST00000509084 HIGD1AQ9Y241 93 aa8□□□□□ -1.13
RFC1-211ENST00000509084 PUS1Q9Y606 427 aaKnown RBP eCLIP8□□□□□ -1.13
RFC1-211ENST00000509084 CTXND1A0A1B0GTU2 59 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 SEC14L6B5MCN3 397 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 LINC01619G3V211 115 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 YIF1AO95070 293 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 TRBV12-3P01733 135 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 OR5G3P0C626 314 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 ORM2P19652 201 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 CDC34P49427 236 aaPredicted RBP7.99□□□□□ -1.13
RFC1-211ENST00000509084 TAS2R45P59539 299 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 RAB2AP61019 212 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 KRTAP24-1Q3LI83 254 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 FAM74A1Q5RGS3 127 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 FAM78BQ5VT40 261 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 TOMM20LQ6UXN7 152 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 PRIMA1Q86XR5 153 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 OR1B1Q8NGR6 318 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 FAM213BQ8TBF2 198 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 TMEM190Q8WZ59 177 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 NARS2Q96I59 477 aaKnown RBP7.99□□□□□ -1.13
RFC1-211ENST00000509084 CITED2Q99967 270 aaPredicted RBP7.99□□□□□ -1.13
RFC1-211ENST00000509084 PBDC1Q9BVG4 233 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 RPRMQ9NS64 109 aa7.99□□□□□ -1.13
RFC1-211ENST00000509084 RABAC1Q9UI14 185 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms